RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 PAK3O75914 559 aaPredicted RBP18.98■□□□□ 0.63
SHMT2-234ENST00000557703 NLRP13Q86W25 1043 aa18.98■□□□□ 0.63
SHMT2-234ENST00000557703 EDC4Q6P2E9 1401 aaKnown RBP18.97■□□□□ 0.63
SHMT2-234ENST00000557703 ABTB2Q8N961 1025 aa18.96■□□□□ 0.63
SHMT2-234ENST00000557703 AKAP12Q02952 1782 aa18.96■□□□□ 0.63
SHMT2-234ENST00000557703 ALS2Q96Q42 1657 aa18.95■□□□□ 0.62
SHMT2-234ENST00000557703 LMOD2Q6P5Q4 547 aa18.95■□□□□ 0.62
SHMT2-234ENST00000557703 CD163L1Q9NR16 1453 aa18.95■□□□□ 0.62
SHMT2-234ENST00000557703 TTC21BQ7Z4L5 1316 aa18.95■□□□□ 0.62
SHMT2-234ENST00000557703 A0A1W2PP64 1363 aa18.93■□□□□ 0.62
SHMT2-234ENST00000557703 MED1Q15648 1581 aaPredicted RBP18.93■□□□□ 0.62
SHMT2-234ENST00000557703 MON2Q7Z3U7 1717 aa18.91■□□□□ 0.62
SHMT2-234ENST00000557703 HAP1P54257 671 aaPredicted RBP18.91■□□□□ 0.62
SHMT2-234ENST00000557703 MEX3CQ5U5Q3 659 aaKnown RBP18.91■□□□□ 0.62
SHMT2-234ENST00000557703 USP31Q70CQ4 1352 aa18.91■□□□□ 0.62
SHMT2-234ENST00000557703 NLRP6P59044 892 aa18.9■□□□□ 0.62
SHMT2-234ENST00000557703 KCNH5Q8NCM2 988 aa18.9■□□□□ 0.62
SHMT2-234ENST00000557703 USP19O94966 1318 aa18.9■□□□□ 0.62
SHMT2-234ENST00000557703 NUTM2BA6NNL0 878 aaPredicted RBP18.89■□□□□ 0.61
SHMT2-234ENST00000557703 NUTM2EB1AL46 878 aaPredicted RBP18.89■□□□□ 0.61
SHMT2-234ENST00000557703 NUTM2AQ8IVF1 878 aaPredicted RBP18.89■□□□□ 0.61
SHMT2-234ENST00000557703 KIF7Q2M1P5 1343 aa18.88■□□□□ 0.61
SHMT2-234ENST00000557703 C11orf95C9JLR9 678 aaPredicted RBP18.87■□□□□ 0.61
SHMT2-234ENST00000557703 ZNF772Q68DY9 489 aaPredicted RBP18.87■□□□□ 0.61
SHMT2-234ENST00000557703 NRKQ7Z2Y5 1582 aa18.87■□□□□ 0.61
SHMT2-234ENST00000557703 LRP6O75581 1613 aa18.86■□□□□ 0.61
SHMT2-234ENST00000557703 GCP02774 474 aa18.86■□□□□ 0.61
SHMT2-234ENST00000557703 ILDR2Q71H61 639 aa18.86■□□□□ 0.61
SHMT2-234ENST00000557703 FNBP4Q8N3X1 1017 aaPredicted RBP18.86■□□□□ 0.61
SHMT2-234ENST00000557703 PHF23Q9BUL5 403 aaPredicted RBP18.86■□□□□ 0.61
SHMT2-234ENST00000557703 CPDO75976 1380 aa18.85■□□□□ 0.61
SHMT2-234ENST00000557703 CCDC7Q96M83 1385 aa18.85■□□□□ 0.61
SHMT2-234ENST00000557703 NGLY1Q96IV0 654 aa18.85■□□□□ 0.61
SHMT2-234ENST00000557703 MYOM1P52179 1685 aa18.85■□□□□ 0.61
SHMT2-234ENST00000557703 CGNL1Q0VF96 1302 aa18.84■□□□□ 0.61
SHMT2-234ENST00000557703 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.84■□□□□ 0.61
SHMT2-234ENST00000557703 POLR3GLQ9BT43 218 aa18.84■□□□□ 0.61
SHMT2-234ENST00000557703 USP54Q70EL1 1684 aa18.83■□□□□ 0.61
SHMT2-234ENST00000557703 ADAMTS2O95450 1211 aa18.83■□□□□ 0.6
SHMT2-234ENST00000557703 CABLES1Q8TDN4 633 aa18.83■□□□□ 0.6
SHMT2-234ENST00000557703 COG3Q96JB2 828 aa18.83■□□□□ 0.6
SHMT2-234ENST00000557703 WASHC2AQ641Q2 1341 aa18.82■□□□□ 0.6
SHMT2-234ENST00000557703 C8orf37Q96NL8 207 aa18.82■□□□□ 0.6
SHMT2-234ENST00000557703 CARD14Q9BXL6 1004 aa18.82■□□□□ 0.6
SHMT2-234ENST00000557703 PANK3Q9H999 370 aa18.82■□□□□ 0.6
SHMT2-234ENST00000557703 SLIT3O75094 1523 aa18.82■□□□□ 0.6
SHMT2-234ENST00000557703 MARF1Q9Y4F3 1742 aaKnown RBP18.82■□□□□ 0.6
SHMT2-234ENST00000557703 PIK3C2AO00443 1686 aa18.82■□□□□ 0.6
SHMT2-234ENST00000557703 FYB1O15117 783 aa18.81■□□□□ 0.6
SHMT2-234ENST00000557703 NSD2O96028 1365 aa18.81■□□□□ 0.6
SHMT2-234ENST00000557703 CRYBG1Q9Y4K1 1723 aa18.8■□□□□ 0.6
SHMT2-234ENST00000557703 NUTM2GQ5VZR2 741 aa18.8■□□□□ 0.6
SHMT2-234ENST00000557703 NME9Q86XW9 330 aa18.8■□□□□ 0.6
SHMT2-234ENST00000557703 PRDM11Q9NQV5 511 aa18.8■□□□□ 0.6
SHMT2-234ENST00000557703 KNSTRNQ9Y448 316 aa18.8■□□□□ 0.6
SHMT2-234ENST00000557703 ABCA3Q99758 1704 aa18.8■□□□□ 0.6
SHMT2-234ENST00000557703 OVOS2A0A0J9YW53 1432 aa18.79■□□□□ 0.6
SHMT2-234ENST00000557703 OVOS2Q6IE36 1432 aa18.79■□□□□ 0.6
SHMT2-234ENST00000557703 NSD3Q9BZ95 1437 aa18.79■□□□□ 0.6
SHMT2-234ENST00000557703 AFF2P51816 1311 aa18.78■□□□□ 0.6
SHMT2-234ENST00000557703 FAM83GA6ND36 823 aa18.78■□□□□ 0.6
SHMT2-234ENST00000557703 SLIT2O94813 1529 aa18.78■□□□□ 0.6
SHMT2-234ENST00000557703 PHRF1Q9P1Y6 1649 aaKnown RBP18.78■□□□□ 0.6
SHMT2-234ENST00000557703 UNC5CLQ8IV45 518 aa18.77■□□□□ 0.6
SHMT2-234ENST00000557703 USP21Q9UK80 565 aa18.77■□□□□ 0.6
SHMT2-234ENST00000557703 AATKQ6ZMQ8 1374 aa18.77■□□□□ 0.6
SHMT2-234ENST00000557703 COL14A1Q05707 1796 aaKnown RBP18.76■□□□□ 0.59
SHMT2-234ENST00000557703 ABCC6O95255 1503 aa18.76■□□□□ 0.59
SHMT2-234ENST00000557703 ARHGEF25Q86VW2 580 aa18.76■□□□□ 0.59
SHMT2-234ENST00000557703 TRPC5Q9UL62 973 aaPredicted RBP18.76■□□□□ 0.59
SHMT2-234ENST00000557703 KIAA0232Q92628 1395 aa18.76■□□□□ 0.59
SHMT2-234ENST00000557703 NWD2Q9ULI1 1742 aa18.75■□□□□ 0.59
SHMT2-234ENST00000557703 SOCS7O14512 581 aa18.75■□□□□ 0.59
SHMT2-234ENST00000557703 ZC3H6P61129 1189 aaKnown RBP18.75■□□□□ 0.59
SHMT2-234ENST00000557703 NPC1L1Q9UHC9 1359 aa18.75■□□□□ 0.59
SHMT2-234ENST00000557703 KIF24Q5T7B8 1368 aa18.74■□□□□ 0.59
SHMT2-234ENST00000557703 PER1O15534 1290 aaPredicted RBP18.74■□□□□ 0.59
SHMT2-234ENST00000557703 RGS17Q9UGC6 210 aaPredicted RBP18.74■□□□□ 0.59
SHMT2-234ENST00000557703 BCL9LQ86UU0 1499 aa18.73■□□□□ 0.59
SHMT2-234ENST00000557703 GGNBP2Q9H3C7 697 aa18.73■□□□□ 0.59
SHMT2-234ENST00000557703 QTRT2Q9H974 415 aaKnown RBP18.73■□□□□ 0.59
SHMT2-234ENST00000557703 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.72■□□□□ 0.59
SHMT2-234ENST00000557703 BTG4Q9NY30 223 aa18.72■□□□□ 0.59
SHMT2-234ENST00000557703 NFAT5O94916 1531 aa18.72■□□□□ 0.59
SHMT2-234ENST00000557703 PLEKHG5O94827 1062 aa18.71■□□□□ 0.59
SHMT2-234ENST00000557703 VPS72Q15906 364 aa18.71■□□□□ 0.59
SHMT2-234ENST00000557703 KIF20BQ96Q89 1820 aa18.71■□□□□ 0.59
SHMT2-234ENST00000557703 RBM6P78332 1123 aaKnown RBP18.7■□□□□ 0.58
SHMT2-234ENST00000557703 ZRANB1Q9UGI0 708 aa18.7■□□□□ 0.58
SHMT2-234ENST00000557703 ATRNO75882 1429 aa18.69■□□□□ 0.58
SHMT2-234ENST00000557703 RXRBP28702 533 aa18.69■□□□□ 0.58
SHMT2-234ENST00000557703 AMER1Q5JTC6 1135 aaPredicted RBP18.69■□□□□ 0.58
SHMT2-234ENST00000557703 EVA1CP58658 441 aa18.68■□□□□ 0.58
SHMT2-234ENST00000557703 RTL1A6NKG5 1358 aa18.68■□□□□ 0.58
SHMT2-234ENST00000557703 BLMP54132 1417 aaPredicted RBP18.67■□□□□ 0.58
SHMT2-234ENST00000557703 CHRNA2Q15822 529 aa18.67■□□□□ 0.58
SHMT2-234ENST00000557703 IP6K1Q92551 441 aa18.67■□□□□ 0.58
SHMT2-234ENST00000557703 GJD4Q96KN9 370 aaPredicted RBP18.67■□□□□ 0.58
SHMT2-234ENST00000557703 PLCH1Q4KWH8 1693 aa18.66■□□□□ 0.58
SHMT2-234ENST00000557703 CDK12Q9NYV4 1490 aaPredicted RBP18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms