RNA–Protein interactions for RNA: ENST00000557682.6

LINC01578-209, Transcript of long intergenic non-protein coding RNA 1578, humanhuman

TSL 2 BASIC

Gene LINC01578, Length 2,683 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01578-209ENST00000557682 ARHGEF40Q8TER5 1519 aa29.56■■■□□ 2.32
LINC01578-209ENST00000557682 DDRGK1Q96HY6 314 aa29.56■■■□□ 2.32
LINC01578-209ENST00000557682 A2ML1A8K2U0 1454 aa29.55■■■□□ 2.32
LINC01578-209ENST00000557682 ADGRB2O60241 1585 aa29.55■■■□□ 2.32
LINC01578-209ENST00000557682 TRIM35Q9UPQ4 493 aa29.54■■■□□ 2.32
LINC01578-209ENST00000557682 PCDHB15Q9Y5E8 787 aa29.54■■■□□ 2.32
LINC01578-209ENST00000557682 TMPOP42166 694 aaKnown RBP29.53■■■□□ 2.32
LINC01578-209ENST00000557682 HDGFL2Q7Z4V5 671 aaPredicted RBP29.53■■■□□ 2.32
LINC01578-209ENST00000557682 MYH16Q9H6N6 1097 aa29.52■■■□□ 2.32
LINC01578-209ENST00000557682 RIMS2Q9UQ26 1411 aa29.51■■■□□ 2.31
LINC01578-209ENST00000557682 EXOSC9Q06265 439 aaKnown RBP29.5■■■□□ 2.31
LINC01578-209ENST00000557682 NCKAP5LQ9HCH0 1330 aa29.49■■■□□ 2.31
LINC01578-209ENST00000557682 MAPK8IP3Q9UPT6 1336 aa29.49■■■□□ 2.31
LINC01578-209ENST00000557682 ANO8Q9HCE9 1232 aaPredicted RBP29.48■■■□□ 2.31
LINC01578-209ENST00000557682 DIAPH1O60610 1272 aaKnown RBP29.47■■■□□ 2.31
LINC01578-209ENST00000557682 ANKRD26Q9UPS8 1709 aa29.46■■■□□ 2.31
LINC01578-209ENST00000557682 RTN4Q9NQC3 1192 aaKnown RBP29.46■■■□□ 2.31
LINC01578-209ENST00000557682 RIPK4P57078 832 aa29.45■■■□□ 2.31
LINC01578-209ENST00000557682 ZRANB1Q9UGI0 708 aa29.45■■■□□ 2.31
LINC01578-209ENST00000557682 TXNDC2Q86VQ3 553 aa29.45■■■□□ 2.3
LINC01578-209ENST00000557682 METP08581 1390 aa29.44■■■□□ 2.3
LINC01578-209ENST00000557682 AGLP35573 1532 aa29.43■■■□□ 2.3
LINC01578-209ENST00000557682 SPATA31D1Q6ZQQ2 1576 aa29.43■■■□□ 2.3
LINC01578-209ENST00000557682 SMC4Q9NTJ3 1288 aa29.43■■■□□ 2.3
LINC01578-209ENST00000557682 MED14O60244 1454 aa29.42■■■□□ 2.3
LINC01578-209ENST00000557682 SETD1AO15047 1707 aaKnown RBP29.41■■■□□ 2.3
LINC01578-209ENST00000557682 POLKQ9UBT6 870 aa29.41■■■□□ 2.3
LINC01578-209ENST00000557682 SEC24BO95487 1268 aa29.41■■■□□ 2.3
LINC01578-209ENST00000557682 SSH1Q8WYL5 1049 aa29.41■■■□□ 2.3
LINC01578-209ENST00000557682 KIF20BQ96Q89 1820 aa29.41■■■□□ 2.3
LINC01578-209ENST00000557682 HMOX1P09601 288 aa29.4■■■□□ 2.3
LINC01578-209ENST00000557682 EMILIN1Q9Y6C2 1016 aa29.4■■■□□ 2.3
LINC01578-209ENST00000557682 NME9Q86XW9 330 aa29.39■■■□□ 2.3
LINC01578-209ENST00000557682 REREQ9P2R6 1566 aa29.39■■■□□ 2.3
LINC01578-209ENST00000557682 PNPLA6Q8IY17 1366 aa29.39■■■□□ 2.29
LINC01578-209ENST00000557682 PRKAR2BP31323 418 aa29.38■■■□□ 2.29
LINC01578-209ENST00000557682 FTSJ3Q8IY81 847 aaKnown RBP29.38■■■□□ 2.29
LINC01578-209ENST00000557682 ZKSCAN2Q63HK3 967 aa29.38■■■□□ 2.29
LINC01578-209ENST00000557682 DAXXQ9UER7 740 aaPredicted RBP29.37■■■□□ 2.29
LINC01578-209ENST00000557682 TRIM27P14373 513 aa29.37■■■□□ 2.29
LINC01578-209ENST00000557682 MVPQ14764 893 aaKnown RBP29.37■■■□□ 2.29
LINC01578-209ENST00000557682 LRRC7Q96NW7 1537 aa29.37■■■□□ 2.29
LINC01578-209ENST00000557682 NRXN3Q9Y4C0 1643 aa29.36■■■□□ 2.29
LINC01578-209ENST00000557682 THUMPD2Q9BTF0 503 aaKnown RBP29.36■■■□□ 2.29
LINC01578-209ENST00000557682 DZIP1LQ8IYY4 767 aaKnown RBP29.36■■■□□ 2.29
LINC01578-209ENST00000557682 GSE1Q14687 1217 aa29.35■■■□□ 2.29
LINC01578-209ENST00000557682 PHACTR3Q96KR7 559 aa29.35■■■□□ 2.29
LINC01578-209ENST00000557682 PPP6R1Q9UPN7 881 aa29.35■■■□□ 2.29
LINC01578-209ENST00000557682 NFKBIBQ15653 356 aa29.34■■■□□ 2.29
LINC01578-209ENST00000557682 PDZRN3Q9UPQ7 1066 aa29.34■■■□□ 2.29
LINC01578-209ENST00000557682 ZMYM3Q14202 1370 aa29.34■■■□□ 2.29
LINC01578-209ENST00000557682 WASLO00401 505 aaPredicted RBP29.34■■■□□ 2.29
LINC01578-209ENST00000557682 NCBP3Q53F19 620 aaKnown RBP29.34■■■□□ 2.29
LINC01578-209ENST00000557682 PPIP5K1Q6PFW1 1433 aa29.34■■■□□ 2.29
LINC01578-209ENST00000557682 PMFBP1Q8TBY8 1022 aa29.33■■■□□ 2.29
LINC01578-209ENST00000557682 DLC1Q96QB1 1528 aa29.33■■■□□ 2.29
LINC01578-209ENST00000557682 RSPH6AQ9H0K4 717 aa29.33■■■□□ 2.29
LINC01578-209ENST00000557682 ESF1Q9H501 851 aaKnown RBP29.32■■■□□ 2.28
LINC01578-209ENST00000557682 USP19O94966 1318 aa29.32■■■□□ 2.28
LINC01578-209ENST00000557682 NOB1Q9ULX3 412 aaKnown RBP29.32■■■□□ 2.28
LINC01578-209ENST00000557682 PRKCSHP14314 528 aaPredicted RBP29.31■■■□□ 2.28
LINC01578-209ENST00000557682 ATP7BP35670 1465 aa29.31■■■□□ 2.28
LINC01578-209ENST00000557682 MAP2P11137 1827 aaKnown RBP29.3■■■□□ 2.28
LINC01578-209ENST00000557682 ITPRIPQ8IWB1 547 aa29.3■■■□□ 2.28
LINC01578-209ENST00000557682 RRS1Q15050 365 aaKnown RBP29.29■■■□□ 2.28
LINC01578-209ENST00000557682 NUDT16Q96DE0 195 aaKnown RBP29.29■■■□□ 2.28
LINC01578-209ENST00000557682 NUTM2FA1L443 756 aa29.28■■■□□ 2.28
LINC01578-209ENST00000557682 FCHSD2O94868 740 aa29.28■■■□□ 2.28
LINC01578-209ENST00000557682 ATF7IPQ6VMQ6 1270 aa29.26■■■□□ 2.27
LINC01578-209ENST00000557682 CPSF1Q10570 1443 aaKnown RBP29.26■■■□□ 2.27
LINC01578-209ENST00000557682 FAM135BQ49AJ0 1406 aa29.26■■■□□ 2.27
LINC01578-209ENST00000557682 CPS1P31327 1500 aa29.25■■■□□ 2.27
LINC01578-209ENST00000557682 TMEM57Q8N5G2 664 aa29.25■■■□□ 2.27
LINC01578-209ENST00000557682 VIRMAQ69YN4 1812 aaKnown RBP29.25■■■□□ 2.27
LINC01578-209ENST00000557682 RWDD1Q9H446 243 aaPredicted RBP29.25■■■□□ 2.27
LINC01578-209ENST00000557682 IL16Q14005 1332 aa29.24■■■□□ 2.27
LINC01578-209ENST00000557682 CT47B1P0C2W7 299 aaPredicted RBP29.24■■■□□ 2.27
LINC01578-209ENST00000557682 PRR36Q9H6K5 1346 aa29.23■■■□□ 2.27
LINC01578-209ENST00000557682 BRPF3Q9ULD4 1205 aa29.23■■■□□ 2.27
LINC01578-209ENST00000557682 KIF13AQ9H1H9 1805 aa29.23■■■□□ 2.27
LINC01578-209ENST00000557682 EDC4Q6P2E9 1401 aaKnown RBP29.22■■■□□ 2.27
LINC01578-209ENST00000557682 ELL2O00472 640 aaPredicted RBP29.21■■■□□ 2.27
LINC01578-209ENST00000557682 IL13P35225 146 aa29.21■■■□□ 2.27
LINC01578-209ENST00000557682 PLPPR3Q6T4P5 718 aa29.21■■■□□ 2.27
LINC01578-209ENST00000557682 CDC42BPGQ6DT37 1551 aa29.2■■■□□ 2.27
LINC01578-209ENST00000557682 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.2■■■□□ 2.27
LINC01578-209ENST00000557682 AAMPQ13685 434 aa29.19■■■□□ 2.26
LINC01578-209ENST00000557682 TSPYL6Q8N831 410 aa29.19■■■□□ 2.26
LINC01578-209ENST00000557682 CCDC61Q9Y6R9 512 aa29.19■■■□□ 2.26
LINC01578-209ENST00000557682 ROBO2Q9HCK4 1378 aa29.19■■■□□ 2.26
LINC01578-209ENST00000557682 PNNQ9H307 717 aaKnown RBP29.18■■■□□ 2.26
LINC01578-209ENST00000557682 TNRQ92752 1358 aa29.18■■■□□ 2.26
LINC01578-209ENST00000557682 NFE2L2Q16236 605 aa29.18■■■□□ 2.26
LINC01578-209ENST00000557682 COG3Q96JB2 828 aa29.17■■■□□ 2.26
LINC01578-209ENST00000557682 FAM83GA6ND36 823 aa29.16■■■□□ 2.26
LINC01578-209ENST00000557682 CEBPAP49715 358 aaPredicted RBP29.16■■■□□ 2.26
LINC01578-209ENST00000557682 DDX19BQ9UMR2 479 aa29.16■■■□□ 2.26
LINC01578-209ENST00000557682 DCTN1Q14203 1278 aa29.14■■■□□ 2.26
LINC01578-209ENST00000557682 LTKP29376 864 aa29.13■■■□□ 2.25
LINC01578-209ENST00000557682 TMEM2Q9UHN6 1383 aa29.13■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms