RNA–Protein interactions for RNA: ENST00000557365.1

APEX1-219, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 3

Gene APEX1, Length 831 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-219ENST00000557365 FYB1O15117 783 aa16.36■□□□□ 0.21
APEX1-219ENST00000557365 PSME1Q06323 249 aa16.36■□□□□ 0.21
APEX1-219ENST00000557365 PRKRIP1Q9H875 184 aaPredicted RBP16.36■□□□□ 0.21
APEX1-219ENST00000557365 USP54Q70EL1 1684 aa16.36■□□□□ 0.21
APEX1-219ENST00000557365 PARD3Q8TEW0 1356 aa16.36■□□□□ 0.21
APEX1-219ENST00000557365 TRPM3Q9HCF6 1732 aaPredicted RBP16.36■□□□□ 0.21
APEX1-219ENST00000557365 NHSL1Q5SYE7 1610 aa16.35■□□□□ 0.21
APEX1-219ENST00000557365 SBNO1A3KN83 1393 aa16.35■□□□□ 0.21
APEX1-219ENST00000557365 USP31Q70CQ4 1352 aa16.35■□□□□ 0.21
APEX1-219ENST00000557365 FOXO3O43524 673 aa16.34■□□□□ 0.21
APEX1-219ENST00000557365 KRT28Q7Z3Y7 464 aa16.33■□□□□ 0.2
APEX1-219ENST00000557365 SCAF1Q9H7N4 1312 aaKnown RBP16.33■□□□□ 0.2
APEX1-219ENST00000557365 PXDNQ92626 1479 aa16.33■□□□□ 0.2
APEX1-219ENST00000557365 SOS2Q07890 1332 aaPredicted RBP16.32■□□□□ 0.2
APEX1-219ENST00000557365 AHDC1Q5TGY3 1603 aaPredicted RBP16.32■□□□□ 0.2
APEX1-219ENST00000557365 ROBO1Q9Y6N7 1651 aa16.32■□□□□ 0.2
APEX1-219ENST00000557365 ALS2Q96Q42 1657 aa16.31■□□□□ 0.2
APEX1-219ENST00000557365 PIK3C2AO00443 1686 aa16.3■□□□□ 0.2
APEX1-219ENST00000557365 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.3■□□□□ 0.2
APEX1-219ENST00000557365 OVOS2A0A0J9YW53 1432 aa16.29■□□□□ 0.2
APEX1-219ENST00000557365 OVOS2Q6IE36 1432 aa16.29■□□□□ 0.2
APEX1-219ENST00000557365 UBAP1LF5GYI3 381 aa16.29■□□□□ 0.2
APEX1-219ENST00000557365 CC2D1BQ5T0F9 858 aaKnown RBP16.29■□□□□ 0.2
APEX1-219ENST00000557365 MYBBP1AQ9BQG0 1328 aaKnown RBP16.28■□□□□ 0.2
APEX1-219ENST00000557365 CCER2I3L3R5 266 aa16.28■□□□□ 0.2
APEX1-219ENST00000557365 MORC1Q86VD1 984 aa16.28■□□□□ 0.2
APEX1-219ENST00000557365 NME9Q86XW9 330 aa16.28■□□□□ 0.2
APEX1-219ENST00000557365 COG3Q96JB2 828 aa16.28■□□□□ 0.2
APEX1-219ENST00000557365 SPATA31A3Q5VYP0 1347 aa16.27■□□□□ 0.2
APEX1-219ENST00000557365 MIER1Q8N108 512 aa16.27■□□□□ 0.2
APEX1-219ENST00000557365 GGNBP2Q9H3C7 697 aa16.27■□□□□ 0.2
APEX1-219ENST00000557365 MARF1Q9Y4F3 1742 aaKnown RBP16.27■□□□□ 0.19
APEX1-219ENST00000557365 TNS3Q68CZ2 1445 aa16.27■□□□□ 0.19
APEX1-219ENST00000557365 ARHGEF10O15013 1369 aa16.26■□□□□ 0.19
APEX1-219ENST00000557365 AATKQ6ZMQ8 1374 aa16.26■□□□□ 0.19
APEX1-219ENST00000557365 NLRP13Q86W25 1043 aa16.26■□□□□ 0.19
APEX1-219ENST00000557365 ABTB2Q8N961 1025 aa16.26■□□□□ 0.19
APEX1-219ENST00000557365 PAK3O75914 559 aaPredicted RBP16.25■□□□□ 0.19
APEX1-219ENST00000557365 NLRP6P59044 892 aa16.25■□□□□ 0.19
APEX1-219ENST00000557365 MED1Q15648 1581 aaPredicted RBP16.24■□□□□ 0.19
APEX1-219ENST00000557365 USP19O94966 1318 aa16.23■□□□□ 0.19
APEX1-219ENST00000557365 PPP2R1AP30153 589 aa16.23■□□□□ 0.19
APEX1-219ENST00000557365 LRRC59Q96AG4 307 aaKnown RBP16.23■□□□□ 0.19
APEX1-219ENST00000557365 MAP2P11137 1827 aaKnown RBP16.23■□□□□ 0.19
APEX1-219ENST00000557365 SLIT3O75094 1523 aa16.23■□□□□ 0.19
APEX1-219ENST00000557365 XPCQ01831 940 aaPredicted RBP16.22■□□□□ 0.19
APEX1-219ENST00000557365 KCNH5Q8NCM2 988 aa16.22■□□□□ 0.19
APEX1-219ENST00000557365 DDX17Q92841 729 aaKnown RBP16.22■□□□□ 0.19
APEX1-219ENST00000557365 PHLPP1O60346 1717 aa16.22■□□□□ 0.19
APEX1-219ENST00000557365 COL16A1Q07092 1604 aaPredicted RBP16.21■□□□□ 0.19
APEX1-219ENST00000557365 ZRANB1Q9UGI0 708 aa16.21■□□□□ 0.19
APEX1-219ENST00000557365 SMG6Q86US8 1419 aaKnown RBP16.2■□□□□ 0.18
APEX1-219ENST00000557365 CRYBG1Q9Y4K1 1723 aa16.2■□□□□ 0.18
APEX1-219ENST00000557365 INSRP06213 1382 aa16.2■□□□□ 0.18
APEX1-219ENST00000557365 KIF24Q5T7B8 1368 aa16.2■□□□□ 0.18
APEX1-219ENST00000557365 COL22A1Q8NFW1 1626 aaPredicted RBP16.19■□□□□ 0.18
APEX1-219ENST00000557365 PHRF1Q9P1Y6 1649 aaKnown RBP16.19■□□□□ 0.18
APEX1-219ENST00000557365 PIP4K2BP78356 416 aa16.18■□□□□ 0.18
APEX1-219ENST00000557365 NFAT5O94916 1531 aa16.18■□□□□ 0.18
APEX1-219ENST00000557365 PNPLA6Q8IY17 1366 aa16.17■□□□□ 0.18
APEX1-219ENST00000557365 CNGB1Q14028 1251 aaPredicted RBP16.17■□□□□ 0.18
APEX1-219ENST00000557365 POLKQ9UBT6 870 aa16.17■□□□□ 0.18
APEX1-219ENST00000557365 GCP02774 474 aa16.16■□□□□ 0.18
APEX1-219ENST00000557365 LMOD2Q6P5Q4 547 aa16.16■□□□□ 0.18
APEX1-219ENST00000557365 MTHFSP49914 203 aa16.15■□□□□ 0.18
APEX1-219ENST00000557365 NUTM2GQ5VZR2 741 aa16.15■□□□□ 0.18
APEX1-219ENST00000557365 CDK12Q9NYV4 1490 aaPredicted RBP16.15■□□□□ 0.18
APEX1-219ENST00000557365 ABCC6O95255 1503 aa16.14■□□□□ 0.18
APEX1-219ENST00000557365 TNNT2P45379 298 aaPredicted RBP16.14■□□□□ 0.17
APEX1-219ENST00000557365 CFAP53Q96M91 514 aa16.14■□□□□ 0.17
APEX1-219ENST00000557365 SHPRHQ149N8 1683 aa16.14■□□□□ 0.17
APEX1-219ENST00000557365 ABCA3Q99758 1704 aa16.14■□□□□ 0.17
APEX1-219ENST00000557365 RTL1A6NKG5 1358 aa16.13■□□□□ 0.17
APEX1-219ENST00000557365 CPDO75976 1380 aa16.13■□□□□ 0.17
APEX1-219ENST00000557365 LTN1O94822 1766 aa16.13■□□□□ 0.17
APEX1-219ENST00000557365 ARHGEF25Q86VW2 580 aa16.13■□□□□ 0.17
APEX1-219ENST00000557365 MRS2Q9HD23 443 aa16.13■□□□□ 0.17
APEX1-219ENST00000557365 MAP3K19Q56UN5 1328 aa16.12■□□□□ 0.17
APEX1-219ENST00000557365 FLT4P35916 1363 aa16.12■□□□□ 0.17
APEX1-219ENST00000557365 JCADQ9P266 1359 aa16.11■□□□□ 0.17
APEX1-219ENST00000557365 COL3A1P02461 1466 aaPredicted RBP16.1■□□□□ 0.17
APEX1-219ENST00000557365 CCDC184Q52MB2 194 aa16.1■□□□□ 0.17
APEX1-219ENST00000557365 PNISRQ8TF01 805 aaKnown RBP16.1■□□□□ 0.17
APEX1-219ENST00000557365 EMILIN1Q9Y6C2 1016 aa16.1■□□□□ 0.17
APEX1-219ENST00000557365 PEAK1Q9H792 1746 aa16.1■□□□□ 0.17
APEX1-219ENST00000557365 FBLN1P23142 703 aa16.09■□□□□ 0.17
APEX1-219ENST00000557365 RRS1Q15050 365 aaKnown RBP16.09■□□□□ 0.17
APEX1-219ENST00000557365 IP6K1Q92551 441 aa16.09■□□□□ 0.17
APEX1-219ENST00000557365 COL18A1P39060 1754 aa16.08■□□□□ 0.17
APEX1-219ENST00000557365 BLMP54132 1417 aaPredicted RBP16.08■□□□□ 0.16
APEX1-219ENST00000557365 AMPHP49418 695 aa16.07■□□□□ 0.16
APEX1-219ENST00000557365 NUDCQ9Y266 331 aa16.07■□□□□ 0.16
APEX1-219ENST00000557365 DIAPH1O60610 1272 aaKnown RBP16.06■□□□□ 0.16
APEX1-219ENST00000557365 HOXC9P31274 260 aa16.06■□□□□ 0.16
APEX1-219ENST00000557365 CABLES1Q8TDN4 633 aa16.06■□□□□ 0.16
APEX1-219ENST00000557365 SPATA31A6Q5VVP1 1343 aa16.05■□□□□ 0.16
APEX1-219ENST00000557365 SOX12O15370 315 aa16.05■□□□□ 0.16
APEX1-219ENST00000557365 HSPA1LP34931 641 aa16.05■□□□□ 0.16
APEX1-219ENST00000557365 KIAA0232Q92628 1395 aa16.04■□□□□ 0.16
APEX1-219ENST00000557365 PPM1GO15355 546 aaPredicted RBP16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms