RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 CDK19Q9BWU1 502 aa20.46■□□□□ 0.87
SNX6-210ENST00000557341 POLR3AO14802 1390 aaPredicted RBP20.46■□□□□ 0.87
SNX6-210ENST00000557341 PAK3O75914 559 aaPredicted RBP20.45■□□□□ 0.86
SNX6-210ENST00000557341 VPS72Q15906 364 aa20.45■□□□□ 0.86
SNX6-210ENST00000557341 NRKQ7Z2Y5 1582 aa20.45■□□□□ 0.86
SNX6-210ENST00000557341 CENPJQ9HC77 1338 aaPredicted RBP20.44■□□□□ 0.86
SNX6-210ENST00000557341 CCDC9Q9Y3X0 531 aaKnown RBP20.43■□□□□ 0.86
SNX6-210ENST00000557341 FAM83GA6ND36 823 aa20.42■□□□□ 0.86
SNX6-210ENST00000557341 L3MBTL2Q969R5 705 aa20.42■□□□□ 0.86
SNX6-210ENST00000557341 CCDC61Q9Y6R9 512 aa20.42■□□□□ 0.86
SNX6-210ENST00000557341 ACEP12821 1306 aa20.41■□□□□ 0.86
SNX6-210ENST00000557341 PPIP5K1Q6PFW1 1433 aa20.41■□□□□ 0.86
SNX6-210ENST00000557341 THSD7AQ9UPZ6 1657 aa20.41■□□□□ 0.86
SNX6-210ENST00000557341 AKAP12Q02952 1782 aa20.41■□□□□ 0.86
SNX6-210ENST00000557341 BTG4Q9NY30 223 aa20.39■□□□□ 0.85
SNX6-210ENST00000557341 SRPK2P78362 688 aaKnown RBP20.38■□□□□ 0.85
SNX6-210ENST00000557341 CCDC125Q86Z20 511 aa20.38■□□□□ 0.85
SNX6-210ENST00000557341 SIN3AQ96ST3 1273 aa20.38■□□□□ 0.85
SNX6-210ENST00000557341 RGPD1P0DJD0 1748 aa20.38■□□□□ 0.85
SNX6-210ENST00000557341 LMO7Q8WWI1 1683 aa20.38■□□□□ 0.85
SNX6-210ENST00000557341 BLMP54132 1417 aaPredicted RBP20.37■□□□□ 0.85
SNX6-210ENST00000557341 PLEKHG3A1L390 1219 aa20.37■□□□□ 0.85
SNX6-210ENST00000557341 SEPT12Q8IYM1 358 aa20.37■□□□□ 0.85
SNX6-210ENST00000557341 PRDM11Q9NQV5 511 aa20.37■□□□□ 0.85
SNX6-210ENST00000557341 ROCK2O75116 1388 aaKnown RBP20.36■□□□□ 0.85
SNX6-210ENST00000557341 KIAA0232Q92628 1395 aa20.36■□□□□ 0.85
SNX6-210ENST00000557341 NBPF8Q3BBV2 869 aa20.36■□□□□ 0.85
SNX6-210ENST00000557341 PIK3C2AO00443 1686 aa20.35■□□□□ 0.85
SNX6-210ENST00000557341 ONECUT3O60422 494 aaPredicted RBP20.35■□□□□ 0.85
SNX6-210ENST00000557341 NEUROD1Q13562 356 aa20.35■□□□□ 0.85
SNX6-210ENST00000557341 A0A0G2JS52 829 aa20.33■□□□□ 0.85
SNX6-210ENST00000557341 MYT1Q01538 1121 aa20.33■□□□□ 0.85
SNX6-210ENST00000557341 CABP2Q9NPB3 220 aa20.33■□□□□ 0.85
SNX6-210ENST00000557341 MON2Q7Z3U7 1717 aa20.33■□□□□ 0.84
SNX6-210ENST00000557341 BRD4O60885 1362 aaPredicted RBP20.33■□□□□ 0.84
SNX6-210ENST00000557341 NUTM2GQ5VZR2 741 aa20.32■□□□□ 0.84
SNX6-210ENST00000557341 USP6P35125 1406 aa20.32■□□□□ 0.84
SNX6-210ENST00000557341 TNS1Q9HBL0 1735 aaKnown RBP20.32■□□□□ 0.84
SNX6-210ENST00000557341 SPATA31A5Q5VU36 1347 aa20.31■□□□□ 0.84
SNX6-210ENST00000557341 SPATA31A7Q8IWB4 1347 aa20.31■□□□□ 0.84
SNX6-210ENST00000557341 FAM98CQ17RN3 349 aaKnown RBP20.31■□□□□ 0.84
SNX6-210ENST00000557341 KRT27Q7Z3Y8 459 aa20.31■□□□□ 0.84
SNX6-210ENST00000557341 ABTB2Q8N961 1025 aa20.31■□□□□ 0.84
SNX6-210ENST00000557341 USP19O94966 1318 aa20.3■□□□□ 0.84
SNX6-210ENST00000557341 EVC2Q86UK5 1308 aa20.3■□□□□ 0.84
SNX6-210ENST00000557341 WNK3Q9BYP7 1800 aa20.3■□□□□ 0.84
SNX6-210ENST00000557341 SLIT3O75094 1523 aa20.29■□□□□ 0.84
SNX6-210ENST00000557341 CPDO75976 1380 aa20.29■□□□□ 0.84
SNX6-210ENST00000557341 ZC3H6P61129 1189 aaKnown RBP20.28■□□□□ 0.84
SNX6-210ENST00000557341 CHRNA2Q15822 529 aa20.28■□□□□ 0.84
SNX6-210ENST00000557341 CAMTA1Q9Y6Y1 1673 aa20.28■□□□□ 0.84
SNX6-210ENST00000557341 SRCAPQ6ZRS2 3230 aa20.28■□□□□ 0.84
SNX6-210ENST00000557341 SF3B2Q13435 895 aaKnown RBP20.27■□□□□ 0.84
SNX6-210ENST00000557341 PARP4Q9UKK3 1724 aaKnown RBP20.27■□□□□ 0.83
SNX6-210ENST00000557341 SSH2Q76I76 1423 aa20.27■□□□□ 0.83
SNX6-210ENST00000557341 RGPD5Q99666 1765 aa20.26■□□□□ 0.83
SNX6-210ENST00000557341 NLRP13Q86W25 1043 aa20.26■□□□□ 0.83
SNX6-210ENST00000557341 SPATA31A1Q5TZJ5 1347 aa20.26■□□□□ 0.83
SNX6-210ENST00000557341 STRN4Q9NRL3 753 aa20.25■□□□□ 0.83
SNX6-210ENST00000557341 CABP1Q9NZU7 370 aa20.25■□□□□ 0.83
SNX6-210ENST00000557341 ZRANB1Q9UGI0 708 aa20.25■□□□□ 0.83
SNX6-210ENST00000557341 TONSLQ96HA7 1378 aa20.24■□□□□ 0.83
SNX6-210ENST00000557341 SBNO2Q9Y2G9 1366 aa20.24■□□□□ 0.83
SNX6-210ENST00000557341 COL18A1P39060 1754 aa20.24■□□□□ 0.83
SNX6-210ENST00000557341 USP54Q70EL1 1684 aa20.24■□□□□ 0.83
SNX6-210ENST00000557341 COL5A2P05997 1499 aaPredicted RBP20.23■□□□□ 0.83
SNX6-210ENST00000557341 GCP02774 474 aa20.21■□□□□ 0.83
SNX6-210ENST00000557341 DEFB132Q7Z7B7 95 aa20.21■□□□□ 0.83
SNX6-210ENST00000557341 EVA1CP58658 441 aa20.2■□□□□ 0.82
SNX6-210ENST00000557341 LTN1O94822 1766 aa20.2■□□□□ 0.82
SNX6-210ENST00000557341 LRRC37A3O60309 1634 aa20.19■□□□□ 0.82
SNX6-210ENST00000557341 NLRP6P59044 892 aa20.18■□□□□ 0.82
SNX6-210ENST00000557341 CARD11Q9BXL7 1154 aa20.18■□□□□ 0.82
SNX6-210ENST00000557341 CPSF1Q10570 1443 aaKnown RBP20.18■□□□□ 0.82
SNX6-210ENST00000557341 BAG6P46379 1132 aa20.17■□□□□ 0.82
SNX6-210ENST00000557341 USP35Q9P2H5 1018 aa20.17■□□□□ 0.82
SNX6-210ENST00000557341 SBF2Q86WG5 1849 aa20.16■□□□□ 0.82
SNX6-210ENST00000557341 BARGINQ6ZT62 677 aa20.16■□□□□ 0.82
SNX6-210ENST00000557341 ZNF692Q9BU19 519 aaPredicted RBP20.16■□□□□ 0.82
SNX6-210ENST00000557341 DISP2A7MBM2 1401 aa20.16■□□□□ 0.82
SNX6-210ENST00000557341 CRB1P82279 1406 aa20.16■□□□□ 0.82
SNX6-210ENST00000557341 NFAT5O94916 1531 aa20.16■□□□□ 0.82
SNX6-210ENST00000557341 RREB1Q92766 1687 aa20.16■□□□□ 0.82
SNX6-210ENST00000557341 FAM182BQ5T319 152 aa20.15■□□□□ 0.82
SNX6-210ENST00000557341 LARP1Q6PKG0 1096 aaKnown RBP20.15■□□□□ 0.82
SNX6-210ENST00000557341 TTC21AQ8NDW8 1320 aa20.15■□□□□ 0.82
SNX6-210ENST00000557341 AATKQ6ZMQ8 1374 aa20.15■□□□□ 0.82
SNX6-210ENST00000557341 KTN1Q86UP2 1357 aaKnown RBP20.15■□□□□ 0.82
SNX6-210ENST00000557341 ABCC6O95255 1503 aa20.15■□□□□ 0.82
SNX6-210ENST00000557341 LRP5O75197 1615 aa20.15■□□□□ 0.82
SNX6-210ENST00000557341 TTC21BQ7Z4L5 1316 aa20.14■□□□□ 0.81
SNX6-210ENST00000557341 TRIM26Q12899 539 aaPredicted RBP20.14■□□□□ 0.81
SNX6-210ENST00000557341 ZBTB7CA1YPR0 619 aa20.13■□□□□ 0.81
SNX6-210ENST00000557341 TCP11L2Q8N4U5 519 aa20.13■□□□□ 0.81
SNX6-210ENST00000557341 THRAP3Q9Y2W1 955 aaKnown RBP20.13■□□□□ 0.81
SNX6-210ENST00000557341 PEAK1Q9H792 1746 aa20.13■□□□□ 0.81
SNX6-210ENST00000557341 CD163L1Q9NR16 1453 aa20.12■□□□□ 0.81
SNX6-210ENST00000557341 NUP188Q5SRE5 1749 aa20.12■□□□□ 0.81
SNX6-210ENST00000557341 RGPD3A6NKT7 1758 aaPredicted RBP20.11■□□□□ 0.81
SNX6-210ENST00000557341 RGPD4Q7Z3J3 1758 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms