RNA–Protein interactions for RNA: ENST00000557150.5

APEX1-215, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 3

Gene APEX1, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-215ENST00000557150 RGPD8O14715 1765 aaPredicted RBP16.26■□□□□ 0.19
APEX1-215ENST00000557150 TTC21BQ7Z4L5 1316 aa16.25■□□□□ 0.19
APEX1-215ENST00000557150 SMG6Q86US8 1419 aaKnown RBP16.25■□□□□ 0.19
APEX1-215ENST00000557150 AATKQ6ZMQ8 1374 aa16.25■□□□□ 0.19
APEX1-215ENST00000557150 TTC21AQ8NDW8 1320 aa16.24■□□□□ 0.19
APEX1-215ENST00000557150 PDE3BQ13370 1112 aa16.24■□□□□ 0.19
APEX1-215ENST00000557150 NME9Q86XW9 330 aa16.24■□□□□ 0.19
APEX1-215ENST00000557150 COG3Q96JB2 828 aa16.24■□□□□ 0.19
APEX1-215ENST00000557150 NCOA3Q9Y6Q9 1424 aa16.23■□□□□ 0.19
APEX1-215ENST00000557150 PROSER2Q86WR7 435 aaPredicted RBP16.23■□□□□ 0.19
APEX1-215ENST00000557150 NGEFQ8N5V2 710 aa16.23■□□□□ 0.19
APEX1-215ENST00000557150 COL3A1P02461 1466 aaPredicted RBP16.22■□□□□ 0.19
APEX1-215ENST00000557150 HSPA2P54652 639 aa16.22■□□□□ 0.19
APEX1-215ENST00000557150 NGDNQ8NEJ9 315 aaKnown RBP16.22■□□□□ 0.19
APEX1-215ENST00000557150 PNPLA6Q8IY17 1366 aa16.22■□□□□ 0.19
APEX1-215ENST00000557150 PMFBP1Q8TBY8 1022 aa16.21■□□□□ 0.19
APEX1-215ENST00000557150 NUDCQ9Y266 331 aa16.21■□□□□ 0.19
APEX1-215ENST00000557150 OVOS2A0A0J9YW53 1432 aa16.2■□□□□ 0.18
APEX1-215ENST00000557150 OVOS2Q6IE36 1432 aa16.2■□□□□ 0.18
APEX1-215ENST00000557150 STRCQ7RTU9 1775 aa16.2■□□□□ 0.18
APEX1-215ENST00000557150 USP31Q70CQ4 1352 aa16.19■□□□□ 0.18
APEX1-215ENST00000557150 C14orf37Q86TY3 774 aa16.19■□□□□ 0.18
APEX1-215ENST00000557150 POLKQ9UBT6 870 aa16.19■□□□□ 0.18
APEX1-215ENST00000557150 PHF8Q9UPP1 1060 aa16.19■□□□□ 0.18
APEX1-215ENST00000557150 ZRANB1Q9UGI0 708 aa16.18■□□□□ 0.18
APEX1-215ENST00000557150 STRCP1A6NGW2 1772 aa16.18■□□□□ 0.18
APEX1-215ENST00000557150 MAP2P11137 1827 aaKnown RBP16.17■□□□□ 0.18
APEX1-215ENST00000557150 CDK12Q9NYV4 1490 aaPredicted RBP16.17■□□□□ 0.18
APEX1-215ENST00000557150 CERKQ8TCT0 537 aa16.17■□□□□ 0.18
APEX1-215ENST00000557150 RUNDC1Q96C34 613 aa16.17■□□□□ 0.18
APEX1-215ENST00000557150 RBM33Q96EV2 1170 aaKnown RBP16.17■□□□□ 0.18
APEX1-215ENST00000557150 C19orf44Q9H6X5 657 aa16.17■□□□□ 0.18
APEX1-215ENST00000557150 DCCP43146 1447 aa16.17■□□□□ 0.18
APEX1-215ENST00000557150 USP54Q70EL1 1684 aa16.17■□□□□ 0.18
APEX1-215ENST00000557150 DIAPH1O60610 1272 aaKnown RBP16.16■□□□□ 0.18
APEX1-215ENST00000557150 NCBP3Q53F19 620 aaKnown RBP16.16■□□□□ 0.18
APEX1-215ENST00000557150 LRRC7Q96NW7 1537 aa16.15■□□□□ 0.18
APEX1-215ENST00000557150 CCDC146Q8IYE0 955 aa16.15■□□□□ 0.18
APEX1-215ENST00000557150 ZNF521Q96K83 1311 aa16.15■□□□□ 0.18
APEX1-215ENST00000557150 TMEM94Q12767 1356 aa16.14■□□□□ 0.17
APEX1-215ENST00000557150 SENP3-EIF4A1A0A087X0R7 540 aa16.14■□□□□ 0.17
APEX1-215ENST00000557150 NEFLP07196 543 aa16.14■□□□□ 0.17
APEX1-215ENST00000557150 U2AF1L5P0DN76 240 aaPredicted RBP16.14■□□□□ 0.17
APEX1-215ENST00000557150 U2AF1Q01081 240 aaKnown RBP eCLIP16.14■□□□□ 0.17
APEX1-215ENST00000557150 SALL2Q9Y467 1007 aaPredicted RBP16.14■□□□□ 0.17
APEX1-215ENST00000557150 PIK3C2AO00443 1686 aa16.14■□□□□ 0.17
APEX1-215ENST00000557150 APAF1O14727 1248 aa16.13■□□□□ 0.17
APEX1-215ENST00000557150 PNNQ9H307 717 aaKnown RBP16.13■□□□□ 0.17
APEX1-215ENST00000557150 IQSEC2Q5JU85 1478 aa16.13■□□□□ 0.17
APEX1-215ENST00000557150 KIF1AQ12756 1690 aa16.13■□□□□ 0.17
APEX1-215ENST00000557150 C1orf167Q5SNV9 1468 aa16.12■□□□□ 0.17
APEX1-215ENST00000557150 ESCO1Q5FWF5 840 aa16.12■□□□□ 0.17
APEX1-215ENST00000557150 SUPT16HQ9Y5B9 1047 aaKnown RBP16.12■□□□□ 0.17
APEX1-215ENST00000557150 EMILIN1Q9Y6C2 1016 aa16.12■□□□□ 0.17
APEX1-215ENST00000557150 U2SURPO15042 1029 aaKnown RBP16.11■□□□□ 0.17
APEX1-215ENST00000557150 PPM1GO15355 546 aaPredicted RBP16.1■□□□□ 0.17
APEX1-215ENST00000557150 ATF3P18847 181 aa16.1■□□□□ 0.17
APEX1-215ENST00000557150 FBLN1P23142 703 aa16.1■□□□□ 0.17
APEX1-215ENST00000557150 PSME1Q06323 249 aa16.09■□□□□ 0.17
APEX1-215ENST00000557150 GOLGA2Q08379 1002 aa16.09■□□□□ 0.17
APEX1-215ENST00000557150 MST1RQ04912 1400 aa16.09■□□□□ 0.17
APEX1-215ENST00000557150 MARF1Q9Y4F3 1742 aaKnown RBP16.08■□□□□ 0.17
APEX1-215ENST00000557150 FCHSD2O94868 740 aa16.08■□□□□ 0.16
APEX1-215ENST00000557150 IL13P35225 146 aa16.08■□□□□ 0.16
APEX1-215ENST00000557150 NLRP6P59044 892 aa16.08■□□□□ 0.16
APEX1-215ENST00000557150 RRS1Q15050 365 aaKnown RBP16.08■□□□□ 0.16
APEX1-215ENST00000557150 CCDC27Q2M243 656 aa16.08■□□□□ 0.16
APEX1-215ENST00000557150 CADPS2Q86UW7 1296 aa16.08■□□□□ 0.16
APEX1-215ENST00000557150 TCP11L2Q8N4U5 519 aa16.08■□□□□ 0.16
APEX1-215ENST00000557150 CDCA7LQ96GN5 454 aa16.08■□□□□ 0.16
APEX1-215ENST00000557150 PLEKHF1Q96S99 279 aa16.08■□□□□ 0.16
APEX1-215ENST00000557150 DMRT2Q9Y5R5 561 aa16.08■□□□□ 0.16
APEX1-215ENST00000557150 MSH6P52701 1360 aa16.08■□□□□ 0.16
APEX1-215ENST00000557150 ABTB2Q8N961 1025 aa16.07■□□□□ 0.16
APEX1-215ENST00000557150 ORAI2Q96SN7 254 aa16.07■□□□□ 0.16
APEX1-215ENST00000557150 PHF23Q9BUL5 403 aaPredicted RBP16.07■□□□□ 0.16
APEX1-215ENST00000557150 KIF24Q5T7B8 1368 aa16.07■□□□□ 0.16
APEX1-215ENST00000557150 XIRP1Q702N8 1843 aaKnown RBP16.06■□□□□ 0.16
APEX1-215ENST00000557150 SBNO1A3KN83 1393 aa16.06■□□□□ 0.16
APEX1-215ENST00000557150 RNF123Q5XPI4 1314 aa16.06■□□□□ 0.16
APEX1-215ENST00000557150 PAK3O75914 559 aaPredicted RBP16.06■□□□□ 0.16
APEX1-215ENST00000557150 FKBP8Q14318 412 aa16.06■□□□□ 0.16
APEX1-215ENST00000557150 PEAK1Q9H792 1746 aa16.05■□□□□ 0.16
APEX1-215ENST00000557150 MAPK8IP3Q9UPT6 1336 aa16.05■□□□□ 0.16
APEX1-215ENST00000557150 SLFN5Q08AF3 891 aa16.05■□□□□ 0.16
APEX1-215ENST00000557150 TRMT2AQ8IZ69 625 aaKnown RBP16.05■□□□□ 0.16
APEX1-215ENST00000557150 FLT4P35916 1363 aa16.04■□□□□ 0.16
APEX1-215ENST00000557150 MAP3K19Q56UN5 1328 aa16.04■□□□□ 0.16
APEX1-215ENST00000557150 ERICH6BQ5W0A0 696 aa16.04■□□□□ 0.16
APEX1-215ENST00000557150 WDR63Q8IWG1 891 aa16.04■□□□□ 0.16
APEX1-215ENST00000557150 WWC1Q8IX03 1113 aa16.04■□□□□ 0.16
APEX1-215ENST00000557150 TRPM3Q9HCF6 1732 aaPredicted RBP16.04■□□□□ 0.16
APEX1-215ENST00000557150 E9PSI1 815 aa16.03■□□□□ 0.16
APEX1-215ENST00000557150 DUSP27Q5VZP5 1158 aa16.03■□□□□ 0.16
APEX1-215ENST00000557150 RSPH6AQ9H0K4 717 aa16.03■□□□□ 0.16
APEX1-215ENST00000557150 ZNF335Q9H4Z2 1342 aaPredicted RBP16.02■□□□□ 0.16
APEX1-215ENST00000557150 FOXO3O43524 673 aa16.02■□□□□ 0.16
APEX1-215ENST00000557150 NEFMP07197 916 aa16.02■□□□□ 0.16
APEX1-215ENST00000557150 KRT28Q7Z3Y7 464 aa16.02■□□□□ 0.16
APEX1-215ENST00000557150 RCAN3Q9UKA8 241 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms