RNA–Protein interactions for RNA: ENST00000556463.5

MARK3-210, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best)

Gene MARK3, Length 3,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-210ENST00000556463 C1orf115Q9H7X2 142 aa10.79□□□□□ -0.68
MARK3-210ENST00000556463 PDZRN3Q9UPQ7 1066 aa10.79□□□□□ -0.68
MARK3-210ENST00000556463 SETBP1Q9Y6X0 1596 aa10.79□□□□□ -0.68
MARK3-210ENST00000556463 MRE11P49959 708 aa10.78□□□□□ -0.68
MARK3-210ENST00000556463 ESPNB1AK53 854 aa10.78□□□□□ -0.68
MARK3-210ENST00000556463 ZNF518AQ6AHZ1 1483 aa10.78□□□□□ -0.68
MARK3-210ENST00000556463 CHMP5Q9NZZ3 219 aa10.78□□□□□ -0.68
MARK3-210ENST00000556463 AEBP1Q8IUX7 1158 aa10.77□□□□□ -0.68
MARK3-210ENST00000556463 MSNP26038 577 aaKnown RBP10.77□□□□□ -0.69
MARK3-210ENST00000556463 SPOCK2Q92563 424 aa10.77□□□□□ -0.69
MARK3-210ENST00000556463 PLCH2O75038 1416 aa10.77□□□□□ -0.69
MARK3-210ENST00000556463 ZFYVE16Q7Z3T8 1539 aa10.77□□□□□ -0.69
MARK3-210ENST00000556463 ARAP3Q8WWN8 1544 aa10.76□□□□□ -0.69
MARK3-210ENST00000556463 NCLP19338 710 aaKnown RBP10.76□□□□□ -0.69
MARK3-210ENST00000556463 MROH1Q8NDA8 1641 aa10.76□□□□□ -0.69
MARK3-210ENST00000556463 TRAK2O60296 914 aa10.76□□□□□ -0.69
MARK3-210ENST00000556463 IGSF3O75054 1194 aa10.76□□□□□ -0.69
MARK3-210ENST00000556463 SNX21Q969T3 373 aa10.76□□□□□ -0.69
MARK3-210ENST00000556463 CALD1Q05682 793 aaKnown RBP10.76□□□□□ -0.69
MARK3-210ENST00000556463 HDAC1Q13547 482 aaPredicted RBP10.76□□□□□ -0.69
MARK3-210ENST00000556463 ERBB4Q15303 1308 aa10.76□□□□□ -0.69
MARK3-210ENST00000556463 RBM25P49756 843 aaKnown RBP10.75□□□□□ -0.69
MARK3-210ENST00000556463 RWDD1Q9H446 243 aaPredicted RBP10.75□□□□□ -0.69
MARK3-210ENST00000556463 TNNQ9UQP3 1299 aa10.75□□□□□ -0.69
MARK3-210ENST00000556463 PPRC1Q5VV67 1664 aaKnown RBP10.75□□□□□ -0.69
MARK3-210ENST00000556463 NKX1-1Q15270 411 aaPredicted RBP10.75□□□□□ -0.69
MARK3-210ENST00000556463 RUNDC1Q96C34 613 aa10.75□□□□□ -0.69
MARK3-210ENST00000556463 UPF2Q9HAU5 1272 aaKnown RBP10.75□□□□□ -0.69
MARK3-210ENST00000556463 MVPQ14764 893 aaKnown RBP10.74□□□□□ -0.69
MARK3-210ENST00000556463 CLEC17AQ6ZS10 378 aa10.74□□□□□ -0.69
MARK3-210ENST00000556463 GRPEL1Q9HAV7 217 aa10.74□□□□□ -0.69
MARK3-210ENST00000556463 MROH2AA6NES4 1674 aa10.74□□□□□ -0.69
MARK3-210ENST00000556463 CT47B1P0C2W7 299 aaPredicted RBP10.74□□□□□ -0.69
MARK3-210ENST00000556463 SMC5Q8IY18 1101 aa10.74□□□□□ -0.69
MARK3-210ENST00000556463 C22orf23Q9BZE7 217 aa10.74□□□□□ -0.69
MARK3-210ENST00000556463 TRAPPC8Q9Y2L5 1435 aa10.73□□□□□ -0.69
MARK3-210ENST00000556463 TPM2P07951 284 aa10.73□□□□□ -0.69
MARK3-210ENST00000556463 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.73□□□□□ -0.693e-8■■■□□ 14.9
MARK3-210ENST00000556463 DDX11L8A8MPP1 907 aa10.72□□□□□ -0.69
MARK3-210ENST00000556463 KIF1BO60333 1816 aa10.72□□□□□ -0.69
MARK3-210ENST00000556463 ADGRB1O14514 1584 aa10.72□□□□□ -0.69
MARK3-210ENST00000556463 CIZ1Q9ULV3 898 aaPredicted RBP10.72□□□□□ -0.69
MARK3-210ENST00000556463 NOS1P29475 1434 aa10.71□□□□□ -0.69
MARK3-210ENST00000556463 IBTKQ9P2D0 1353 aaPredicted RBP10.71□□□□□ -0.69
MARK3-210ENST00000556463 NEUROD2Q15784 382 aa10.71□□□□□ -0.69
MARK3-210ENST00000556463 LMOD2Q6P5Q4 547 aa10.71□□□□□ -0.69
MARK3-210ENST00000556463 CERS3Q8IU89 383 aa10.71□□□□□ -0.69
MARK3-210ENST00000556463 NECTIN2Q92692 538 aa10.71□□□□□ -0.69
MARK3-210ENST00000556463 QRICH2Q9H0J4 1663 aa10.71□□□□□ -0.69
MARK3-210ENST00000556463 GTF2E1P29083 439 aaPredicted RBP10.71□□□□□ -0.7
MARK3-210ENST00000556463 CBX1P83916 185 aa10.71□□□□□ -0.7
MARK3-210ENST00000556463 TCP11L2Q8N4U5 519 aa10.71□□□□□ -0.7
MARK3-210ENST00000556463 CFAP74Q9C0B2 1584 aa10.71□□□□□ -0.7
MARK3-210ENST00000556463 RAB3GAP1Q15042 981 aa10.7□□□□□ -0.7
MARK3-210ENST00000556463 GAS2L3Q86XJ1 694 aa10.7□□□□□ -0.7
MARK3-210ENST00000556463 KIF2CQ99661 725 aa10.7□□□□□ -0.7
MARK3-210ENST00000556463 PPP1R9BQ96SB3 815 aa10.7□□□□□ -0.7
MARK3-210ENST00000556463 PRDM4Q9UKN5 801 aa10.7□□□□□ -0.7
MARK3-210ENST00000556463 ADGRB3O60242 1522 aa10.7□□□□□ -0.7
MARK3-210ENST00000556463 CGNQ9P2M7 1197 aaKnown RBP10.7□□□□□ -0.7
MARK3-210ENST00000556463 LMTK2Q8IWU2 1503 aa10.7□□□□□ -0.7
MARK3-210ENST00000556463 REREQ9P2R6 1566 aa10.69□□□□□ -0.7
MARK3-210ENST00000556463 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.69□□□□□ -0.7
MARK3-210ENST00000556463 FANCAO15360 1455 aa10.69□□□□□ -0.7
MARK3-210ENST00000556463 COL3A1P02461 1466 aaPredicted RBP10.69□□□□□ -0.7
MARK3-210ENST00000556463 PPLO60437 1756 aa10.69□□□□□ -0.7
MARK3-210ENST00000556463 NSD3Q9BZ95 1437 aa10.69□□□□□ -0.7
MARK3-210ENST00000556463 EFCAB6Q5THR3 1501 aa10.69□□□□□ -0.7
MARK3-210ENST00000556463 ZNF219Q9P2Y4 722 aaPredicted RBP10.69□□□□□ -0.7
MARK3-210ENST00000556463 MED14O60244 1454 aa10.68□□□□□ -0.7
MARK3-210ENST00000556463 ZCCHC11Q5TAX3 1644 aaKnown RBP10.68□□□□□ -0.7
MARK3-210ENST00000556463 UHRF1BP1LA0JNW5 1464 aa10.68□□□□□ -0.7
MARK3-210ENST00000556463 PUS7Q96PZ0 661 aaKnown RBP10.68□□□□□ -0.7
MARK3-210ENST00000556463 CD109Q6YHK3 1445 aa10.68□□□□□ -0.7
MARK3-210ENST00000556463 TERF1P54274 439 aa10.67□□□□□ -0.7
MARK3-210ENST00000556463 TNPO1Q92973 898 aaKnown RBP10.67□□□□□ -0.7
MARK3-210ENST00000556463 ZKSCAN2Q63HK3 967 aa10.67□□□□□ -0.7
MARK3-210ENST00000556463 UGGT1Q9NYU2 1555 aa10.67□□□□□ -0.7
MARK3-210ENST00000556463 DZIP1LQ8IYY4 767 aaKnown RBP10.66□□□□□ -0.7
MARK3-210ENST00000556463 PLEKHF1Q96S99 279 aa10.66□□□□□ -0.7
MARK3-210ENST00000556463 ZBTB40Q9NUA8 1239 aa10.66□□□□□ -0.7
MARK3-210ENST00000556463 ADGRF5Q8IZF2 1346 aa10.66□□□□□ -0.7
MARK3-210ENST00000556463 NSD2O96028 1365 aa10.66□□□□□ -0.7
MARK3-210ENST00000556463 SKOR2Q2VWA4 1001 aaPredicted RBP10.66□□□□□ -0.7
MARK3-210ENST00000556463 ZNF771Q7L3S4 317 aaPredicted RBP10.66□□□□□ -0.7
MARK3-210ENST00000556463 ABCA9Q8IUA7 1624 aa10.66□□□□□ -0.7
MARK3-210ENST00000556463 ANKRD26Q9UPS8 1709 aa10.66□□□□□ -0.7
MARK3-210ENST00000556463 UQCRHLA0A096LP55 91 aa10.66□□□□□ -0.7
MARK3-210ENST00000556463 UQCRHP07919 91 aa10.66□□□□□ -0.7
MARK3-210ENST00000556463 PTMSP20962 102 aa10.66□□□□□ -0.7
MARK3-210ENST00000556463 NUCB1Q02818 461 aa10.66□□□□□ -0.7
MARK3-210ENST00000556463 CFAP70Q5T0N1 1121 aa10.66□□□□□ -0.7
MARK3-210ENST00000556463 TRIM27P14373 513 aa10.65□□□□□ -0.7
MARK3-210ENST00000556463 MPNDQ8N594 471 aa10.65□□□□□ -0.7
MARK3-210ENST00000556463 PTMAP06454 111 aaKnown RBP10.65□□□□□ -0.71
MARK3-210ENST00000556463 TRERF1Q96PN7 1200 aa10.65□□□□□ -0.71
MARK3-210ENST00000556463 IL16Q14005 1332 aa10.65□□□□□ -0.71
MARK3-210ENST00000556463 ATP7AQ04656 1500 aa10.64□□□□□ -0.71
MARK3-210ENST00000556463 PPP4R3BQ5MIZ7 849 aa10.64□□□□□ -0.71
MARK3-210ENST00000556463 HSCBQ8IWL3 235 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms