RNA–Protein interactions for RNA: ENST00000556375.5

SLIRP-206, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-206ENST00000556375 NWD2Q9ULI1 1742 aa16.34■□□□□ 0.21
SLIRP-206ENST00000556375 ATAD2Q6PL18 1390 aa16.34■□□□□ 0.21
SLIRP-206ENST00000556375 FNBP4Q8N3X1 1017 aaPredicted RBP16.33■□□□□ 0.2
SLIRP-206ENST00000556375 BRD4O60885 1362 aaPredicted RBP16.32■□□□□ 0.2
SLIRP-206ENST00000556375 SLIT2O94813 1529 aa16.32■□□□□ 0.2
SLIRP-206ENST00000556375 HAP1P54257 671 aaPredicted RBP16.32■□□□□ 0.2
SLIRP-206ENST00000556375 NRKQ7Z2Y5 1582 aa16.32■□□□□ 0.2
SLIRP-206ENST00000556375 CDK12Q9NYV4 1490 aaPredicted RBP16.32■□□□□ 0.2
SLIRP-206ENST00000556375 MON2Q7Z3U7 1717 aa16.31■□□□□ 0.2
SLIRP-206ENST00000556375 USP6P35125 1406 aa16.31■□□□□ 0.2
SLIRP-206ENST00000556375 PAK3O75914 559 aaPredicted RBP16.31■□□□□ 0.2
SLIRP-206ENST00000556375 CABLES1Q8TDN4 633 aa16.31■□□□□ 0.2
SLIRP-206ENST00000556375 BCL9LQ86UU0 1499 aa16.3■□□□□ 0.2
SLIRP-206ENST00000556375 ATRNO75882 1429 aa16.3■□□□□ 0.2
SLIRP-206ENST00000556375 USP47Q96K76 1375 aa16.3■□□□□ 0.2
SLIRP-206ENST00000556375 CABP1Q9NZU7 370 aa16.3■□□□□ 0.2
SLIRP-206ENST00000556375 USP21Q9UK80 565 aa16.3■□□□□ 0.2
SLIRP-206ENST00000556375 COL14A1Q05707 1796 aaKnown RBP16.3■□□□□ 0.2
SLIRP-206ENST00000556375 NRAPQ86VF7 1730 aa16.29■□□□□ 0.2
SLIRP-206ENST00000556375 PIK3C2AO00443 1686 aa16.29■□□□□ 0.2
SLIRP-206ENST00000556375 PLEKHG5O94827 1062 aa16.28■□□□□ 0.2
SLIRP-206ENST00000556375 RXRBP28702 533 aa16.28■□□□□ 0.2
SLIRP-206ENST00000556375 SSH2Q76I76 1423 aa16.28■□□□□ 0.2
SLIRP-206ENST00000556375 ST20-MTHFSA0A0A6YYL1 179 aa16.27■□□□□ 0.2
SLIRP-206ENST00000556375 TESK2Q96S53 571 aa16.27■□□□□ 0.2
SLIRP-206ENST00000556375 QTRT2Q9H974 415 aaKnown RBP16.27■□□□□ 0.2
SLIRP-206ENST00000556375 TRPC5Q9UL62 973 aaPredicted RBP16.27■□□□□ 0.2
SLIRP-206ENST00000556375 CPSF1Q10570 1443 aaKnown RBP16.27■□□□□ 0.19
SLIRP-206ENST00000556375 RBM6P78332 1123 aaKnown RBP16.26■□□□□ 0.19
SLIRP-206ENST00000556375 RGS12O14924 1447 aa16.26■□□□□ 0.19
SLIRP-206ENST00000556375 USP19O94966 1318 aa16.25■□□□□ 0.19
SLIRP-206ENST00000556375 SLC24A1O60721 1099 aa16.25■□□□□ 0.19
SLIRP-206ENST00000556375 PUS7Q96PZ0 661 aaKnown RBP16.25■□□□□ 0.19
SLIRP-206ENST00000556375 CD163L1Q9NR16 1453 aa16.24■□□□□ 0.19
SLIRP-206ENST00000556375 SLIT3O75094 1523 aa16.24■□□□□ 0.19
SLIRP-206ENST00000556375 USP54Q70EL1 1684 aa16.24■□□□□ 0.19
SLIRP-206ENST00000556375 GLI3P10071 1580 aa16.23■□□□□ 0.19
SLIRP-206ENST00000556375 UNC5CLQ8IV45 518 aa16.23■□□□□ 0.19
SLIRP-206ENST00000556375 ABTB2Q8N961 1025 aa16.23■□□□□ 0.19
SLIRP-206ENST00000556375 ZNF692Q9BU19 519 aaPredicted RBP16.23■□□□□ 0.19
SLIRP-206ENST00000556375 NINLQ9Y2I6 1382 aa16.23■□□□□ 0.19
SLIRP-206ENST00000556375 NUTM2GQ5VZR2 741 aa16.22■□□□□ 0.19
SLIRP-206ENST00000556375 KTN1Q86UP2 1357 aaKnown RBP16.22■□□□□ 0.19
SLIRP-206ENST00000556375 FAM83GA6ND36 823 aa16.21■□□□□ 0.19
SLIRP-206ENST00000556375 KIAA0232Q92628 1395 aa16.21■□□□□ 0.19
SLIRP-206ENST00000556375 LMO7Q8WWI1 1683 aa16.21■□□□□ 0.18
SLIRP-206ENST00000556375 TTC21AQ8NDW8 1320 aa16.2■□□□□ 0.18
SLIRP-206ENST00000556375 NLRP13Q86W25 1043 aa16.2■□□□□ 0.18
SLIRP-206ENST00000556375 PRDM11Q9NQV5 511 aa16.2■□□□□ 0.18
SLIRP-206ENST00000556375 CPDO75976 1380 aa16.2■□□□□ 0.18
SLIRP-206ENST00000556375 TTC21BQ7Z4L5 1316 aa16.19■□□□□ 0.18
SLIRP-206ENST00000556375 TMC1Q8TDI8 760 aa16.19■□□□□ 0.18
SLIRP-206ENST00000556375 EDC4Q6P2E9 1401 aaKnown RBP16.19■□□□□ 0.18
SLIRP-206ENST00000556375 MYOM1P52179 1685 aa16.18■□□□□ 0.18
SLIRP-206ENST00000556375 A0A1W2PP64 1363 aa16.18■□□□□ 0.18
SLIRP-206ENST00000556375 TMF1P82094 1093 aa16.18■□□□□ 0.18
SLIRP-206ENST00000556375 VPS72Q15906 364 aa16.18■□□□□ 0.18
SLIRP-206ENST00000556375 GJD4Q96KN9 370 aaPredicted RBP16.18■□□□□ 0.18
SLIRP-206ENST00000556375 NLRP6P59044 892 aa16.17■□□□□ 0.18
SLIRP-206ENST00000556375 HDGFL2Q7Z4V5 671 aaPredicted RBP16.17■□□□□ 0.18
SLIRP-206ENST00000556375 SLC12A5Q9H2X9 1139 aa16.17■□□□□ 0.18
SLIRP-206ENST00000556375 BTG4Q9NY30 223 aa16.17■□□□□ 0.18
SLIRP-206ENST00000556375 GCP02774 474 aa16.16■□□□□ 0.18
SLIRP-206ENST00000556375 ZC3H6P61129 1189 aaKnown RBP16.16■□□□□ 0.18
SLIRP-206ENST00000556375 TERF2IPQ9NYB0 399 aa16.16■□□□□ 0.18
SLIRP-206ENST00000556375 NFAT5O94916 1531 aa16.15■□□□□ 0.18
SLIRP-206ENST00000556375 BRWD3Q6RI45 1802 aa16.15■□□□□ 0.18
SLIRP-206ENST00000556375 CHRNA2Q15822 529 aa16.14■□□□□ 0.17
SLIRP-206ENST00000556375 CDCA8Q53HL2 280 aa16.14■□□□□ 0.17
SLIRP-206ENST00000556375 CAMTA1Q9Y6Y1 1673 aa16.14■□□□□ 0.17
SLIRP-206ENST00000556375 USP31Q70CQ4 1352 aa16.13■□□□□ 0.17
SLIRP-206ENST00000556375 ANKRD36BQ8N2N9 1353 aa16.13■□□□□ 0.17
SLIRP-206ENST00000556375 COL18A1P39060 1754 aa16.13■□□□□ 0.17
SLIRP-206ENST00000556375 ABCC6O95255 1503 aa16.13■□□□□ 0.17
SLIRP-206ENST00000556375 CCDC9Q9Y3X0 531 aaKnown RBP16.12■□□□□ 0.17
SLIRP-206ENST00000556375 THSD7AQ9UPZ6 1657 aa16.11■□□□□ 0.17
SLIRP-206ENST00000556375 OVOS2A0A0J9YW53 1432 aa16.11■□□□□ 0.17
SLIRP-206ENST00000556375 OVOS2Q6IE36 1432 aa16.11■□□□□ 0.17
SLIRP-206ENST00000556375 LTN1O94822 1766 aa16.11■□□□□ 0.17
SLIRP-206ENST00000556375 EIF4G2P78344 907 aaKnown RBP eCLIP16.11■□□□□ 0.17
SLIRP-206ENST00000556375 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.11■□□□□ 0.17
SLIRP-206ENST00000556375 KCNH5Q8NCM2 988 aa16.11■□□□□ 0.17
SLIRP-206ENST00000556375 EP400Q96L91 3159 aa16.11■□□□□ 0.17
SLIRP-206ENST00000556375 AATKQ6ZMQ8 1374 aa16.11■□□□□ 0.17
SLIRP-206ENST00000556375 COL5A2P05997 1499 aaPredicted RBP16.1■□□□□ 0.17
SLIRP-206ENST00000556375 KIF20BQ96Q89 1820 aa16.1■□□□□ 0.17
SLIRP-206ENST00000556375 SPATA31A5Q5VU36 1347 aa16.1■□□□□ 0.17
SLIRP-206ENST00000556375 SPATA31A7Q8IWB4 1347 aa16.1■□□□□ 0.17
SLIRP-206ENST00000556375 RGPD5Q99666 1765 aa16.09■□□□□ 0.17
SLIRP-206ENST00000556375 NME9Q86XW9 330 aa16.09■□□□□ 0.17
SLIRP-206ENST00000556375 ONECUT3O60422 494 aaPredicted RBP16.08■□□□□ 0.16
SLIRP-206ENST00000556375 HSPA5P11021 654 aaKnown RBP16.08■□□□□ 0.16
SLIRP-206ENST00000556375 UPF1Q92900 1129 aaKnown RBP eCLIP16.07■□□□□ 0.16
SLIRP-206ENST00000556375 STRN4Q9NRL3 753 aa16.07■□□□□ 0.16
SLIRP-206ENST00000556375 ZRANB1Q9UGI0 708 aa16.07■□□□□ 0.16
SLIRP-206ENST00000556375 SPATA31A1Q5TZJ5 1347 aa16.07■□□□□ 0.16
SLIRP-206ENST00000556375 WNK3Q9BYP7 1800 aa16.07■□□□□ 0.16
SLIRP-206ENST00000556375 ARHGEF25Q86VW2 580 aa16.06■□□□□ 0.16
SLIRP-206ENST00000556375 SEPT12Q8IYM1 358 aa16.06■□□□□ 0.16
SLIRP-206ENST00000556375 ZBTB7CA1YPR0 619 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms