RNA–Protein interactions for RNA: ENST00000556296.1

APEX1-213, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 4

Gene APEX1, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-213ENST00000556296 PRR36Q9H6K5 1346 aa18.28■□□□□ 0.52
APEX1-213ENST00000556296 BAG6P46379 1132 aa18.28■□□□□ 0.52
APEX1-213ENST00000556296 SRCAPQ6ZRS2 3230 aa18.28■□□□□ 0.52
APEX1-213ENST00000556296 EP400Q96L91 3159 aa18.27■□□□□ 0.52
APEX1-213ENST00000556296 GLI3P10071 1580 aa18.27■□□□□ 0.52
APEX1-213ENST00000556296 FAM98CQ17RN3 349 aaKnown RBP18.27■□□□□ 0.52
APEX1-213ENST00000556296 PRDM11Q9NQV5 511 aa18.27■□□□□ 0.52
APEX1-213ENST00000556296 ALS2Q96Q42 1657 aa18.26■□□□□ 0.51
APEX1-213ENST00000556296 DEFB132Q7Z7B7 95 aa18.26■□□□□ 0.51
APEX1-213ENST00000556296 SIN3AQ96ST3 1273 aa18.26■□□□□ 0.51
APEX1-213ENST00000556296 NEUROD1Q13562 356 aa18.25■□□□□ 0.51
APEX1-213ENST00000556296 NUDT16Q96DE0 195 aaKnown RBP18.25■□□□□ 0.51
APEX1-213ENST00000556296 ITSN1Q15811 1721 aa18.24■□□□□ 0.51
APEX1-213ENST00000556296 NWD2Q9ULI1 1742 aa18.24■□□□□ 0.51
APEX1-213ENST00000556296 PLCH1Q4KWH8 1693 aa18.24■□□□□ 0.51
APEX1-213ENST00000556296 CCDC61Q9Y6R9 512 aa18.23■□□□□ 0.51
APEX1-213ENST00000556296 ATP7BP35670 1465 aa18.22■□□□□ 0.51
APEX1-213ENST00000556296 CDK19Q9BWU1 502 aa18.22■□□□□ 0.51
APEX1-213ENST00000556296 SPATA31A5Q5VU36 1347 aa18.22■□□□□ 0.51
APEX1-213ENST00000556296 SPATA31A7Q8IWB4 1347 aa18.22■□□□□ 0.51
APEX1-213ENST00000556296 CRYBG1Q9Y4K1 1723 aa18.2■□□□□ 0.5
APEX1-213ENST00000556296 EVA1CP58658 441 aa18.2■□□□□ 0.5
APEX1-213ENST00000556296 TONSLQ96HA7 1378 aa18.19■□□□□ 0.5
APEX1-213ENST00000556296 TOPAZ1Q8N9V7 1692 aa18.19■□□□□ 0.5
APEX1-213ENST00000556296 NBPF1Q3BBV0 1214 aa18.18■□□□□ 0.5
APEX1-213ENST00000556296 BRWD3Q6RI45 1802 aa18.18■□□□□ 0.5
APEX1-213ENST00000556296 NBPF8Q3BBV2 869 aa18.17■□□□□ 0.5
APEX1-213ENST00000556296 STRN4Q9NRL3 753 aa18.17■□□□□ 0.5
APEX1-213ENST00000556296 NRAPQ86VF7 1730 aa18.17■□□□□ 0.5
APEX1-213ENST00000556296 PLEKHG3A1L390 1219 aa18.16■□□□□ 0.5
APEX1-213ENST00000556296 FAM196AQ6ZSG2 479 aa18.16■□□□□ 0.5
APEX1-213ENST00000556296 ABTB2Q8N961 1025 aa18.16■□□□□ 0.5
APEX1-213ENST00000556296 TIMELESSQ9UNS1 1208 aa18.16■□□□□ 0.5
APEX1-213ENST00000556296 KIAA0232Q92628 1395 aa18.16■□□□□ 0.5
APEX1-213ENST00000556296 COL14A1Q05707 1796 aaKnown RBP18.15■□□□□ 0.5
APEX1-213ENST00000556296 ZC3H6P61129 1189 aaKnown RBP18.15■□□□□ 0.5
APEX1-213ENST00000556296 SRPK2P78362 688 aaKnown RBP18.15■□□□□ 0.5
APEX1-213ENST00000556296 ACEP12821 1306 aa18.15■□□□□ 0.5
APEX1-213ENST00000556296 SPATA31A1Q5TZJ5 1347 aa18.15■□□□□ 0.5
APEX1-213ENST00000556296 CHRNA2Q15822 529 aa18.14■□□□□ 0.49
APEX1-213ENST00000556296 NLRP13Q86W25 1043 aa18.14■□□□□ 0.49
APEX1-213ENST00000556296 POLR3AO14802 1390 aaPredicted RBP18.14■□□□□ 0.49
APEX1-213ENST00000556296 EN1Q05925 392 aaPredicted RBP18.13■□□□□ 0.49
APEX1-213ENST00000556296 PDE3BQ13370 1112 aa18.13■□□□□ 0.49
APEX1-213ENST00000556296 NUTM2GQ5VZR2 741 aa18.13■□□□□ 0.49
APEX1-213ENST00000556296 L3MBTL2Q969R5 705 aa18.13■□□□□ 0.49
APEX1-213ENST00000556296 BARGINQ6ZT62 677 aa18.11■□□□□ 0.49
APEX1-213ENST00000556296 USP35Q9P2H5 1018 aa18.11■□□□□ 0.49
APEX1-213ENST00000556296 CENPJQ9HC77 1338 aaPredicted RBP18.11■□□□□ 0.49
APEX1-213ENST00000556296 TRPM1Q7Z4N2 1603 aa18.11■□□□□ 0.49
APEX1-213ENST00000556296 PHRF1Q9P1Y6 1649 aaKnown RBP18.11■□□□□ 0.49
APEX1-213ENST00000556296 QRICH2Q9H0J4 1663 aa18.11■□□□□ 0.49
APEX1-213ENST00000556296 BRD4O60885 1362 aaPredicted RBP18.1■□□□□ 0.49
APEX1-213ENST00000556296 PSDA5PKW4 1024 aaPredicted RBP18.1■□□□□ 0.49
APEX1-213ENST00000556296 C11orf95C9JLR9 678 aaPredicted RBP18.1■□□□□ 0.49
APEX1-213ENST00000556296 FAM182BQ5T319 152 aa18.09■□□□□ 0.49
APEX1-213ENST00000556296 TCP11L2Q8N4U5 519 aa18.09■□□□□ 0.49
APEX1-213ENST00000556296 THRAP3Q9Y2W1 955 aaKnown RBP18.09■□□□□ 0.49
APEX1-213ENST00000556296 CPDO75976 1380 aa18.07■□□□□ 0.48
APEX1-213ENST00000556296 TRIM37O94972 964 aa18.07■□□□□ 0.48
APEX1-213ENST00000556296 APBA3O96018 575 aa18.07■□□□□ 0.48
APEX1-213ENST00000556296 DISP2A7MBM2 1401 aa18.06■□□□□ 0.48
APEX1-213ENST00000556296 PARD3Q8TEW0 1356 aa18.06■□□□□ 0.48
APEX1-213ENST00000556296 GCP02774 474 aa18.06■□□□□ 0.48
APEX1-213ENST00000556296 CABP2Q9NPB3 220 aa18.06■□□□□ 0.48
APEX1-213ENST00000556296 PPIP5K1Q6PFW1 1433 aa18.06■□□□□ 0.48
APEX1-213ENST00000556296 NBPF14Q5TI25 921 aa18.05■□□□□ 0.48
APEX1-213ENST00000556296 SSH2Q76I76 1423 aa18.05■□□□□ 0.48
APEX1-213ENST00000556296 USP19O94966 1318 aa18.04■□□□□ 0.48
APEX1-213ENST00000556296 R3HDM1Q15032 1099 aaKnown RBP18.04■□□□□ 0.48
APEX1-213ENST00000556296 EZH2Q15910 746 aaKnown RBP18.04■□□□□ 0.48
APEX1-213ENST00000556296 LARP1Q6PKG0 1096 aaKnown RBP18.04■□□□□ 0.48
APEX1-213ENST00000556296 EVC2Q86UK5 1308 aa18.03■□□□□ 0.48
APEX1-213ENST00000556296 NLRP6P59044 892 aa18.03■□□□□ 0.48
APEX1-213ENST00000556296 CABP1Q9NZU7 370 aa18.03■□□□□ 0.48
APEX1-213ENST00000556296 NRKQ7Z2Y5 1582 aa18.03■□□□□ 0.48
APEX1-213ENST00000556296 CAMKK2Q96RR4 588 aa18.02■□□□□ 0.48
APEX1-213ENST00000556296 THSD7AQ9UPZ6 1657 aa18.02■□□□□ 0.47
APEX1-213ENST00000556296 ZBTB7CA1YPR0 619 aa18.01■□□□□ 0.47
APEX1-213ENST00000556296 ZNF692Q9BU19 519 aaPredicted RBP18■□□□□ 0.47
APEX1-213ENST00000556296 RGPD1P0DJD0 1748 aa17.99■□□□□ 0.47
APEX1-213ENST00000556296 ZEB1P37275 1124 aaPredicted RBP17.99■□□□□ 0.47
APEX1-213ENST00000556296 ROCK2O75116 1388 aaKnown RBP17.99■□□□□ 0.47
APEX1-213ENST00000556296 LMO7Q8WWI1 1683 aa17.99■□□□□ 0.47
APEX1-213ENST00000556296 KCNH5Q8NCM2 988 aa17.98■□□□□ 0.47
APEX1-213ENST00000556296 USP6P35125 1406 aa17.98■□□□□ 0.47
APEX1-213ENST00000556296 TOM1L2Q6ZVM7 507 aa17.97■□□□□ 0.47
APEX1-213ENST00000556296 CDCA7Q9BWT1 371 aaPredicted RBP17.97■□□□□ 0.47
APEX1-213ENST00000556296 LRP5O75197 1615 aa17.97■□□□□ 0.47
APEX1-213ENST00000556296 CAMTA1Q9Y6Y1 1673 aa17.96■□□□□ 0.47
APEX1-213ENST00000556296 AATKQ6ZMQ8 1374 aa17.96■□□□□ 0.47
APEX1-213ENST00000556296 AKAP12Q02952 1782 aa17.96■□□□□ 0.47
APEX1-213ENST00000556296 CRB1P82279 1406 aa17.96■□□□□ 0.47
APEX1-213ENST00000556296 DDB1Q16531 1140 aa17.95■□□□□ 0.46
APEX1-213ENST00000556296 COL5A2P05997 1499 aaPredicted RBP17.94■□□□□ 0.46
APEX1-213ENST00000556296 PIK3C2AO00443 1686 aa17.93■□□□□ 0.46
APEX1-213ENST00000556296 SLIT3O75094 1523 aa17.93■□□□□ 0.46
APEX1-213ENST00000556296 CSB-PGBD3P0DP91 1061 aa17.93■□□□□ 0.46
APEX1-213ENST00000556296 SBNO2Q9Y2G9 1366 aa17.92■□□□□ 0.46
APEX1-213ENST00000556296 DCAF8L1A6NGE4 600 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms