RNA–Protein interactions for RNA: ENST00000556162.5

SNX6-206, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-206ENST00000556162 TNS3Q68CZ2 1445 aa19.56■□□□□ 0.72
SNX6-206ENST00000556162 ABTB2Q8N961 1025 aa19.55■□□□□ 0.72
SNX6-206ENST00000556162 ARHGEF10O15013 1369 aa19.55■□□□□ 0.72
SNX6-206ENST00000556162 TTC21BQ7Z4L5 1316 aa19.55■□□□□ 0.72
SNX6-206ENST00000556162 PNPLA6Q8IY17 1366 aa19.54■□□□□ 0.72
SNX6-206ENST00000556162 SSH2Q76I76 1423 aa19.53■□□□□ 0.72
SNX6-206ENST00000556162 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.53■□□□□ 0.72
SNX6-206ENST00000556162 TTC21AQ8NDW8 1320 aa19.53■□□□□ 0.72
SNX6-206ENST00000556162 AKAP12Q02952 1782 aa19.52■□□□□ 0.72
SNX6-206ENST00000556162 PANK3Q9H999 370 aa19.52■□□□□ 0.72
SNX6-206ENST00000556162 TRPM3Q9HCF6 1732 aaPredicted RBP19.52■□□□□ 0.72
SNX6-206ENST00000556162 SPATA31A6Q5VVP1 1343 aa19.52■□□□□ 0.72
SNX6-206ENST00000556162 EDC4Q6P2E9 1401 aaKnown RBP19.52■□□□□ 0.72
SNX6-206ENST00000556162 NUTM2GQ5VZR2 741 aa19.51■□□□□ 0.71
SNX6-206ENST00000556162 MYOM1P52179 1685 aa19.51■□□□□ 0.71
SNX6-206ENST00000556162 PLEKHG5O94827 1062 aa19.5■□□□□ 0.71
SNX6-206ENST00000556162 NLRP6P59044 892 aa19.5■□□□□ 0.71
SNX6-206ENST00000556162 NLRP13Q86W25 1043 aa19.5■□□□□ 0.71
SNX6-206ENST00000556162 CARD14Q9BXL6 1004 aa19.5■□□□□ 0.71
SNX6-206ENST00000556162 MON2Q7Z3U7 1717 aa19.49■□□□□ 0.71
SNX6-206ENST00000556162 NUTM2BA6NNL0 878 aaPredicted RBP19.49■□□□□ 0.71
SNX6-206ENST00000556162 NUTM2EB1AL46 878 aaPredicted RBP19.49■□□□□ 0.71
SNX6-206ENST00000556162 NUTM2AQ8IVF1 878 aaPredicted RBP19.49■□□□□ 0.71
SNX6-206ENST00000556162 SHPRHQ149N8 1683 aa19.49■□□□□ 0.71
SNX6-206ENST00000556162 HAP1P54257 671 aaPredicted RBP19.48■□□□□ 0.71
SNX6-206ENST00000556162 CABLES1Q8TDN4 633 aa19.48■□□□□ 0.71
SNX6-206ENST00000556162 ALS2Q96Q42 1657 aa19.47■□□□□ 0.71
SNX6-206ENST00000556162 NME9Q86XW9 330 aa19.47■□□□□ 0.71
SNX6-206ENST00000556162 NSD3Q9BZ95 1437 aa19.46■□□□□ 0.71
SNX6-206ENST00000556162 NRKQ7Z2Y5 1582 aa19.45■□□□□ 0.7
SNX6-206ENST00000556162 COL22A1Q8NFW1 1626 aaPredicted RBP19.45■□□□□ 0.7
SNX6-206ENST00000556162 ZNF316A6NFI3 1004 aaPredicted RBP19.44■□□□□ 0.7
SNX6-206ENST00000556162 FYB1O15117 783 aa19.43■□□□□ 0.7
SNX6-206ENST00000556162 KNSTRNQ9Y448 316 aa19.43■□□□□ 0.7
SNX6-206ENST00000556162 CGNL1Q0VF96 1302 aa19.43■□□□□ 0.7
SNX6-206ENST00000556162 ADAMTS2O95450 1211 aa19.43■□□□□ 0.7
SNX6-206ENST00000556162 ZRANB1Q9UGI0 708 aa19.43■□□□□ 0.7
SNX6-206ENST00000556162 MEX3CQ5U5Q3 659 aaKnown RBP19.42■□□□□ 0.7
SNX6-206ENST00000556162 USP31Q70CQ4 1352 aa19.42■□□□□ 0.7
SNX6-206ENST00000556162 USP19O94966 1318 aa19.41■□□□□ 0.7
SNX6-206ENST00000556162 COG3Q96JB2 828 aa19.41■□□□□ 0.7
SNX6-206ENST00000556162 PIK3C2AO00443 1686 aa19.41■□□□□ 0.7
SNX6-206ENST00000556162 GCP02774 474 aa19.41■□□□□ 0.7
SNX6-206ENST00000556162 GGNBP2Q9H3C7 697 aa19.41■□□□□ 0.7
SNX6-206ENST00000556162 MED1Q15648 1581 aaPredicted RBP19.4■□□□□ 0.7
SNX6-206ENST00000556162 KCNH5Q8NCM2 988 aa19.39■□□□□ 0.7
SNX6-206ENST00000556162 PER1O15534 1290 aaPredicted RBP19.39■□□□□ 0.69
SNX6-206ENST00000556162 LRP6O75581 1613 aa19.38■□□□□ 0.69
SNX6-206ENST00000556162 SOX12O15370 315 aa19.37■□□□□ 0.69
SNX6-206ENST00000556162 ZC3H6P61129 1189 aaKnown RBP19.37■□□□□ 0.69
SNX6-206ENST00000556162 DDX10Q13206 875 aaKnown RBP19.37■□□□□ 0.69
SNX6-206ENST00000556162 OVOS2A0A0J9YW53 1432 aa19.36■□□□□ 0.69
SNX6-206ENST00000556162 OVOS2Q6IE36 1432 aa19.36■□□□□ 0.69
SNX6-206ENST00000556162 C8orf37Q96NL8 207 aa19.36■□□□□ 0.69
SNX6-206ENST00000556162 NGLY1Q96IV0 654 aa19.35■□□□□ 0.69
SNX6-206ENST00000556162 SLIT3O75094 1523 aa19.34■□□□□ 0.69
SNX6-206ENST00000556162 AMER1Q5JTC6 1135 aaPredicted RBP19.34■□□□□ 0.69
SNX6-206ENST00000556162 PRDM11Q9NQV5 511 aa19.34■□□□□ 0.69
SNX6-206ENST00000556162 NSD2O96028 1365 aa19.33■□□□□ 0.69
SNX6-206ENST00000556162 KIAA0232Q92628 1395 aa19.33■□□□□ 0.69
SNX6-206ENST00000556162 CRYBG1Q9Y4K1 1723 aa19.33■□□□□ 0.69
SNX6-206ENST00000556162 FAM83GA6ND36 823 aa19.33■□□□□ 0.68
SNX6-206ENST00000556162 ABCA3Q99758 1704 aa19.33■□□□□ 0.68
SNX6-206ENST00000556162 PHRF1Q9P1Y6 1649 aaKnown RBP19.32■□□□□ 0.68
SNX6-206ENST00000556162 ZBTB7CA1YPR0 619 aa19.32■□□□□ 0.68
SNX6-206ENST00000556162 KIF20BQ96Q89 1820 aa19.32■□□□□ 0.68
SNX6-206ENST00000556162 CPDO75976 1380 aa19.31■□□□□ 0.68
SNX6-206ENST00000556162 USP54Q70EL1 1684 aa19.31■□□□□ 0.68
SNX6-206ENST00000556162 PHF23Q9BUL5 403 aaPredicted RBP19.31■□□□□ 0.68
SNX6-206ENST00000556162 CC2D1BQ5T0F9 858 aaKnown RBP19.31■□□□□ 0.68
SNX6-206ENST00000556162 MORC1Q86VD1 984 aa19.31■□□□□ 0.68
SNX6-206ENST00000556162 ARHGEF25Q86VW2 580 aa19.31■□□□□ 0.68
SNX6-206ENST00000556162 MARF1Q9Y4F3 1742 aaKnown RBP19.31■□□□□ 0.68
SNX6-206ENST00000556162 CHRNA2Q15822 529 aa19.3■□□□□ 0.68
SNX6-206ENST00000556162 CNGB1Q14028 1251 aaPredicted RBP19.29■□□□□ 0.68
SNX6-206ENST00000556162 FNBP4Q8N3X1 1017 aaPredicted RBP19.29■□□□□ 0.68
SNX6-206ENST00000556162 AFF2P51816 1311 aa19.28■□□□□ 0.68
SNX6-206ENST00000556162 NPC1L1Q9UHC9 1359 aa19.28■□□□□ 0.68
SNX6-206ENST00000556162 FBLN1P23142 703 aa19.28■□□□□ 0.68
SNX6-206ENST00000556162 TNNT2P45379 298 aaPredicted RBP19.28■□□□□ 0.68
SNX6-206ENST00000556162 NFAT5O94916 1531 aa19.27■□□□□ 0.68
SNX6-206ENST00000556162 BTG4Q9NY30 223 aa19.27■□□□□ 0.68
SNX6-206ENST00000556162 USP21Q9UK80 565 aa19.27■□□□□ 0.68
SNX6-206ENST00000556162 ZNF772Q68DY9 489 aaPredicted RBP19.26■□□□□ 0.67
SNX6-206ENST00000556162 AATKQ6ZMQ8 1374 aa19.26■□□□□ 0.67
SNX6-206ENST00000556162 RRS1Q15050 365 aaKnown RBP19.25■□□□□ 0.67
SNX6-206ENST00000556162 MAP3K19Q56UN5 1328 aa19.24■□□□□ 0.67
SNX6-206ENST00000556162 SLIT2O94813 1529 aa19.24■□□□□ 0.67
SNX6-206ENST00000556162 AMPHP49418 695 aa19.24■□□□□ 0.67
SNX6-206ENST00000556162 UNC5CLQ8IV45 518 aa19.24■□□□□ 0.67
SNX6-206ENST00000556162 COL14A1Q05707 1796 aaKnown RBP19.24■□□□□ 0.67
SNX6-206ENST00000556162 EVA1CP58658 441 aa19.23■□□□□ 0.67
SNX6-206ENST00000556162 ANKRD26Q9UPS8 1709 aa19.22■□□□□ 0.67
SNX6-206ENST00000556162 AXIN2Q9Y2T1 843 aa19.22■□□□□ 0.67
SNX6-206ENST00000556162 IP6K1Q92551 441 aa19.22■□□□□ 0.67
SNX6-206ENST00000556162 RGS17Q9UGC6 210 aaPredicted RBP19.22■□□□□ 0.67
SNX6-206ENST00000556162 BCL9LQ86UU0 1499 aa19.22■□□□□ 0.67
SNX6-206ENST00000556162 PPM1GO15355 546 aaPredicted RBP19.21■□□□□ 0.67
SNX6-206ENST00000556162 QTRT2Q9H974 415 aaKnown RBP19.2■□□□□ 0.66
SNX6-206ENST00000556162 STRN4Q9NRL3 753 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms