RNA–Protein interactions for RNA: ENST00000555746.5

SRP54-209, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-209ENST00000555746 FKBPLQ9UIM3 349 aa6.64□□□□□ -1.35
SRP54-209ENST00000555746 CTHP32929 405 aa6.63□□□□□ -1.35
SRP54-209ENST00000555746 IFFO2Q5TF58 517 aa6.63□□□□□ -1.35
SRP54-209ENST00000555746 ARMC2Q8NEN0 867 aa6.63□□□□□ -1.35
SRP54-209ENST00000555746 FCF1Q9Y324 198 aaKnown RBP6.62□□□□□ -1.35
SRP54-209ENST00000555746 ARID3CA6NKF2 412 aa6.61□□□□□ -1.35
SRP54-209ENST00000555746 PTCRAQ6ISU1 281 aaPredicted RBP6.61□□□□□ -1.35
SRP54-209ENST00000555746 PDXDC2PQ6P474 469 aa6.61□□□□□ -1.35
SRP54-209ENST00000555746 UNC93B1Q9H1C4 597 aa6.61□□□□□ -1.35
SRP54-209ENST00000555746 ZNF777Q9ULD5 760 aaPredicted RBP6.61□□□□□ -1.35
SRP54-209ENST00000555746 GPSM3Q9Y4H4 160 aa6.61□□□□□ -1.35
SRP54-209ENST00000555746 POM121CA8CG34 1229 aa6.6□□□□□ -1.35
SRP54-209ENST00000555746 GGCXP38435 758 aa6.6□□□□□ -1.35
SRP54-209ENST00000555746 NBPF14Q5TI25 921 aa6.6□□□□□ -1.35
SRP54-209ENST00000555746 CCDC24Q8N4L8 307 aa6.6□□□□□ -1.35
SRP54-209ENST00000555746 ANKLE1Q8NAG6 615 aa6.6□□□□□ -1.35
SRP54-209ENST00000555746 ZBBXA8MT70 800 aa6.59□□□□□ -1.35
SRP54-209ENST00000555746 RNF223E7ERA6 249 aa6.59□□□□□ -1.35
SRP54-209ENST00000555746 SOX11P35716 441 aa6.59□□□□□ -1.35
SRP54-209ENST00000555746 VAC14Q08AM6 782 aa6.59□□□□□ -1.35
SRP54-209ENST00000555746 NR1H3Q13133 447 aa6.59□□□□□ -1.35
SRP54-209ENST00000555746 FBXO45P0C2W1 286 aa6.58□□□□□ -1.36
SRP54-209ENST00000555746 PPP1R18Q6NYC8 613 aa6.58□□□□□ -1.36
SRP54-209ENST00000555746 ALG2Q9H553 416 aa6.58□□□□□ -1.36
SRP54-209ENST00000555746 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.58□□□□□ -1.36
SRP54-209ENST00000555746 PPEF1O14829 653 aaPredicted RBP6.57□□□□□ -1.36
SRP54-209ENST00000555746 PTK2Q05397 1052 aa6.57□□□□□ -1.36
SRP54-209ENST00000555746 SH3BP5LQ7L8J4 393 aa6.57□□□□□ -1.36
SRP54-209ENST00000555746 SH3RF1Q7Z6J0 888 aa6.57□□□□□ -1.36
SRP54-209ENST00000555746 ADAMTS19Q8TE59 1207 aa6.57□□□□□ -1.36
SRP54-209ENST00000555746 GLMNQ92990 594 aa6.57□□□□□ -1.36
SRP54-209ENST00000555746 OCSTAMPQ9BR26 566 aa6.57□□□□□ -1.36
SRP54-209ENST00000555746 EIF4G2P78344 907 aaKnown RBP eCLIP6.56□□□□□ -1.368e-7■■■■■ 28.7
SRP54-209ENST00000555746 PLA2G2CQ5R387 149 aa6.56□□□□□ -1.36
SRP54-209ENST00000555746 CCDC82Q8N4S0 544 aa6.56□□□□□ -1.36
SRP54-209ENST00000555746 CALR3Q96L12 384 aaKnown RBP6.56□□□□□ -1.36
SRP54-209ENST00000555746 SERPINA10Q9UK55 444 aa6.56□□□□□ -1.36
SRP54-209ENST00000555746 RPIAP49247 311 aa6.55□□□□□ -1.36
SRP54-209ENST00000555746 HDGFL1Q5TGJ6 251 aa6.55□□□□□ -1.36
SRP54-209ENST00000555746 ZNF511Q8NB15 262 aa6.55□□□□□ -1.36
SRP54-209ENST00000555746 BAP1Q92560 729 aa6.55□□□□□ -1.36
SRP54-209ENST00000555746 ZBTB24O43167 697 aaPredicted RBP6.54□□□□□ -1.36
SRP54-209ENST00000555746 MCCD1P59942 119 aaPredicted RBP6.54□□□□□ -1.36
SRP54-209ENST00000555746 ZNF592Q92610 1267 aa6.54□□□□□ -1.36
SRP54-209ENST00000555746 ARHGAP9Q9BRR9 750 aa6.54□□□□□ -1.36
SRP54-209ENST00000555746 SH3BP2P78314 561 aa6.53□□□□□ -1.36
SRP54-209ENST00000555746 TRIM32Q13049 653 aa6.53□□□□□ -1.36
SRP54-209ENST00000555746 BPHLQ86WA6 291 aaPredicted RBP6.53□□□□□ -1.36
SRP54-209ENST00000555746 CCDC97Q96F63 343 aaPredicted RBP6.53□□□□□ -1.36
SRP54-209ENST00000555746 WNT7BP56706 349 aa6.52□□□□□ -1.37
SRP54-209ENST00000555746 SEMA3FQ13275 785 aa6.52□□□□□ -1.37
SRP54-209ENST00000555746 LINC01559Q495D7 138 aa6.52□□□□□ -1.37
SRP54-209ENST00000555746 C4orf48Q5BLP8 95 aa6.52□□□□□ -1.37
SRP54-209ENST00000555746 ADAM32Q8TC27 787 aa6.52□□□□□ -1.37
SRP54-209ENST00000555746 C1QTNF2Q9BXJ5 285 aa6.52□□□□□ -1.37
SRP54-209ENST00000555746 ZBTB33Q86T24 672 aa6.51□□□□□ -1.37
SRP54-209ENST00000555746 FOXJ1Q92949 421 aa6.51□□□□□ -1.37
SRP54-209ENST00000555746 EMID1Q96A84 441 aaPredicted RBP6.51□□□□□ -1.37
SRP54-209ENST00000555746 PLA2G2EQ9NZK7 142 aa6.51□□□□□ -1.37
SRP54-209ENST00000555746 A0A0G2JS52 829 aa6.5□□□□□ -1.37
SRP54-209ENST00000555746 SKOR1P84550 965 aa6.5□□□□□ -1.37
SRP54-209ENST00000555746 ERFEQ4G0M1 354 aa6.5□□□□□ -1.37
SRP54-209ENST00000555746 LIAT1Q6ZQX7 453 aa6.5□□□□□ -1.37
SRP54-209ENST00000555746 TRMT44Q8IYL2 757 aaKnown RBP6.5□□□□□ -1.37
SRP54-209ENST00000555746 ARXQ96QS3 562 aa6.5□□□□□ -1.37
SRP54-209ENST00000555746 UCN2Q96RP3 112 aa6.5□□□□□ -1.37
SRP54-209ENST00000555746 CD2BP2O95400 341 aaKnown RBP6.49□□□□□ -1.37
SRP54-209ENST00000555746 VARSP26640 1264 aaKnown RBP6.49□□□□□ -1.37
SRP54-209ENST00000555746 ARID3AQ99856 593 aa6.49□□□□□ -1.37
SRP54-209ENST00000555746 MAGEB6P1A0A0J9YX57 407 aa6.48□□□□□ -1.37
SRP54-209ENST00000555746 AGERQ15109 404 aa6.48□□□□□ -1.37
SRP54-209ENST00000555746 PHTF2Q8N3S3 785 aa6.48□□□□□ -1.37
SRP54-209ENST00000555746 NFATC2IPQ8NCF5 419 aa6.48□□□□□ -1.37
SRP54-209ENST00000555746 CARD14Q9BXL6 1004 aa6.48□□□□□ -1.37
SRP54-209ENST00000555746 PPP1R12CQ9BZL4 782 aa6.48□□□□□ -1.37
SRP54-209ENST00000555746 CEP126Q9P2H0 1117 aa6.48□□□□□ -1.37
SRP54-209ENST00000555746 PCDHB9Q9Y5E1 797 aa6.48□□□□□ -1.37
SRP54-209ENST00000555746 PALM3A6NDB9 673 aaPredicted RBP6.47□□□□□ -1.37
SRP54-209ENST00000555746 CFAP70Q5T0N1 1121 aa6.47□□□□□ -1.37
SRP54-209ENST00000555746 DZIP3Q86Y13 1208 aaKnown RBP6.47□□□□□ -1.37
SRP54-209ENST00000555746 CHIC2Q9UKJ5 165 aa6.47□□□□□ -1.37
SRP54-209ENST00000555746 CDV3Q9UKY7 258 aaKnown RBP6.47□□□□□ -1.37
SRP54-209ENST00000555746 SLC19A1P41440 591 aa6.46□□□□□ -1.38
SRP54-209ENST00000555746 SPRYD7Q5W111 196 aa6.46□□□□□ -1.38
SRP54-209ENST00000555746 MPNDQ8N594 471 aa6.46□□□□□ -1.38
SRP54-209ENST00000555746 FAM174AQ8TBP5 190 aa6.46□□□□□ -1.38
SRP54-209ENST00000555746 SLC10A4Q96EP9 437 aa6.46□□□□□ -1.38
SRP54-209ENST00000555746 MAP4K5Q9Y4K4 846 aa6.46□□□□□ -1.38
SRP54-209ENST00000555746 ESPNB1AK53 854 aa6.45□□□□□ -1.38
SRP54-209ENST00000555746 ATP9BO43861 1147 aa6.45□□□□□ -1.38
SRP54-209ENST00000555746 PPP1R15AO75807 674 aaPredicted RBP6.45□□□□□ -1.38
SRP54-209ENST00000555746 SRPK2P78362 688 aaKnown RBP6.45□□□□□ -1.38
SRP54-209ENST00000555746 RC3H1Q5TC82 1133 aaKnown RBP6.45□□□□□ -1.38
SRP54-209ENST00000555746 TBC1D9Q6ZT07 1266 aa6.45□□□□□ -1.38
SRP54-209ENST00000555746 TFIP11Q9UBB9 837 aaKnown RBP6.45□□□□□ -1.38
SRP54-209ENST00000555746 V9GY48 417 aaPredicted RBP6.45□□□□□ -1.38
SRP54-209ENST00000555746 PIK3CDO00329 1044 aa6.44□□□□□ -1.38
SRP54-209ENST00000555746 WNT7AO00755 349 aa6.44□□□□□ -1.38
SRP54-209ENST00000555746 SIAH2O43255 324 aa6.44□□□□□ -1.38
SRP54-209ENST00000555746 NBPF20Q3BBV1 942 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms