RNA–Protein interactions for RNA: ENST00000555585.5

HNRNPC-220, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 682 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-220ENST00000555585 ZNF335Q9H4Z2 1342 aaPredicted RBP13.08□□□□□ -0.32
HNRNPC-220ENST00000555585 MON2Q7Z3U7 1717 aa13.08□□□□□ -0.32
HNRNPC-220ENST00000555585 CPSF1Q10570 1443 aaKnown RBP13.07□□□□□ -0.32
HNRNPC-220ENST00000555585 CCDC184Q52MB2 194 aa13.07□□□□□ -0.32
HNRNPC-220ENST00000555585 MORC1Q86VD1 984 aa13.07□□□□□ -0.32
HNRNPC-220ENST00000555585 PMFBP1Q8TBY8 1022 aa13.07□□□□□ -0.32
HNRNPC-220ENST00000555585 ACEP12821 1306 aa13.07□□□□□ -0.32
HNRNPC-220ENST00000555585 NCOA3Q9Y6Q9 1424 aa13.06□□□□□ -0.32
HNRNPC-220ENST00000555585 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.06□□□□□ -0.32
HNRNPC-220ENST00000555585 NGDNQ8NEJ9 315 aaKnown RBP13.06□□□□□ -0.32
HNRNPC-220ENST00000555585 C19orf44Q9H6X5 657 aa13.06□□□□□ -0.32
HNRNPC-220ENST00000555585 NSD2O96028 1365 aa13.06□□□□□ -0.32
HNRNPC-220ENST00000555585 EDC4Q6P2E9 1401 aaKnown RBP13.05□□□□□ -0.32
HNRNPC-220ENST00000555585 ANKRD26Q9UPS8 1709 aa13.05□□□□□ -0.32
HNRNPC-220ENST00000555585 XIRP1Q702N8 1843 aaKnown RBP13.05□□□□□ -0.32
HNRNPC-220ENST00000555585 ATF3P18847 181 aa13.05□□□□□ -0.32
HNRNPC-220ENST00000555585 POLA2Q14181 598 aa13.05□□□□□ -0.32
HNRNPC-220ENST00000555585 NLRP13Q86W25 1043 aa13.05□□□□□ -0.32
HNRNPC-220ENST00000555585 BRD4O60885 1362 aaPredicted RBP13.05□□□□□ -0.32
HNRNPC-220ENST00000555585 PPP2R1AP30153 589 aa13.04□□□□□ -0.32
HNRNPC-220ENST00000555585 GGNBP2Q9H3C7 697 aa13.04□□□□□ -0.32
HNRNPC-220ENST00000555585 PHF8Q9UPP1 1060 aa13.04□□□□□ -0.32
HNRNPC-220ENST00000555585 MSH6P52701 1360 aa13.04□□□□□ -0.32
HNRNPC-220ENST00000555585 LRRC7Q96NW7 1537 aa13.03□□□□□ -0.32
HNRNPC-220ENST00000555585 FYB1O15117 783 aa13.03□□□□□ -0.32
HNRNPC-220ENST00000555585 TNNT2P45379 298 aaPredicted RBP13.03□□□□□ -0.32
HNRNPC-220ENST00000555585 ESCO1Q5FWF5 840 aa13.03□□□□□ -0.32
HNRNPC-220ENST00000555585 FAM9BQ8IZU0 186 aa13.02□□□□□ -0.33
HNRNPC-220ENST00000555585 POLR3AO14802 1390 aaPredicted RBP13.02□□□□□ -0.33
HNRNPC-220ENST00000555585 USP6P35125 1406 aa13.02□□□□□ -0.33
HNRNPC-220ENST00000555585 DCCP43146 1447 aa13.02□□□□□ -0.33
HNRNPC-220ENST00000555585 NRKQ7Z2Y5 1582 aa13.02□□□□□ -0.33
HNRNPC-220ENST00000555585 TTC21BQ7Z4L5 1316 aa13.01□□□□□ -0.33
HNRNPC-220ENST00000555585 C1orf167Q5SNV9 1468 aa13□□□□□ -0.33
HNRNPC-220ENST00000555585 CADPS2Q86UW7 1296 aa13□□□□□ -0.33
HNRNPC-220ENST00000555585 NME9Q86XW9 330 aa13□□□□□ -0.33
HNRNPC-220ENST00000555585 ORAI2Q96SN7 254 aa13□□□□□ -0.33
HNRNPC-220ENST00000555585 KIF1AQ12756 1690 aa12.99□□□□□ -0.33
HNRNPC-220ENST00000555585 MST1RQ04912 1400 aa12.98□□□□□ -0.33
HNRNPC-220ENST00000555585 TTC21AQ8NDW8 1320 aa12.98□□□□□ -0.33
HNRNPC-220ENST00000555585 PSME1Q06323 249 aa12.98□□□□□ -0.33
HNRNPC-220ENST00000555585 COG3Q96JB2 828 aa12.98□□□□□ -0.33
HNRNPC-220ENST00000555585 ZRANB1Q9UGI0 708 aa12.98□□□□□ -0.33
HNRNPC-220ENST00000555585 PAK3O75914 559 aaPredicted RBP12.97□□□□□ -0.33
HNRNPC-220ENST00000555585 SSH2Q76I76 1423 aa12.96□□□□□ -0.33
HNRNPC-220ENST00000555585 ZBTB22O15209 634 aa12.96□□□□□ -0.33
HNRNPC-220ENST00000555585 PNISRQ8TF01 805 aaKnown RBP12.96□□□□□ -0.33
HNRNPC-220ENST00000555585 ATF5Q9Y2D1 282 aaPredicted RBP12.96□□□□□ -0.33
HNRNPC-220ENST00000555585 FOXO3O43524 673 aa12.95□□□□□ -0.34
HNRNPC-220ENST00000555585 MTHFSP49914 203 aa12.95□□□□□ -0.34
HNRNPC-220ENST00000555585 CFAP53Q96M91 514 aa12.95□□□□□ -0.34
HNRNPC-220ENST00000555585 RBM42Q9BTD8 480 aaKnown RBP12.95□□□□□ -0.34
HNRNPC-220ENST00000555585 WDR43Q15061 677 aaKnown RBP eCLIP12.94□□□□□ -0.34
HNRNPC-220ENST00000555585 KRT28Q7Z3Y7 464 aa12.94□□□□□ -0.34
HNRNPC-220ENST00000555585 MAP2P11137 1827 aaKnown RBP12.94□□□□□ -0.34
HNRNPC-220ENST00000555585 PIK3C2AO00443 1686 aa12.93□□□□□ -0.34
HNRNPC-220ENST00000555585 LTBP4Q8N2S1 1624 aa12.93□□□□□ -0.34
HNRNPC-220ENST00000555585 XPCQ01831 940 aaPredicted RBP12.93□□□□□ -0.34
HNRNPC-220ENST00000555585 ABTB2Q8N961 1025 aa12.93□□□□□ -0.34
HNRNPC-220ENST00000555585 OVOS2A0A0J9YW53 1432 aa12.92□□□□□ -0.34
HNRNPC-220ENST00000555585 CENPBP07199 599 aaPredicted RBP12.92□□□□□ -0.34
HNRNPC-220ENST00000555585 NLRP6P59044 892 aa12.92□□□□□ -0.34
HNRNPC-220ENST00000555585 HNRNPUQ00839 825 aaKnown RBP eCLIP12.92□□□□□ -0.34
HNRNPC-220ENST00000555585 NUTM2GQ5VZR2 741 aa12.92□□□□□ -0.34
HNRNPC-220ENST00000555585 OVOS2Q6IE36 1432 aa12.92□□□□□ -0.34
HNRNPC-220ENST00000555585 SLAIN2Q9P270 581 aa12.92□□□□□ -0.34
HNRNPC-220ENST00000555585 FBLN1P23142 703 aa12.91□□□□□ -0.34
HNRNPC-220ENST00000555585 USP31Q70CQ4 1352 aa12.91□□□□□ -0.34
HNRNPC-220ENST00000555585 PPM1GO15355 546 aaPredicted RBP12.9□□□□□ -0.34
HNRNPC-220ENST00000555585 SOX12O15370 315 aa12.9□□□□□ -0.34
HNRNPC-220ENST00000555585 LMOD2Q6P5Q4 547 aa12.9□□□□□ -0.34
HNRNPC-220ENST00000555585 AATKQ6ZMQ8 1374 aa12.9□□□□□ -0.34
HNRNPC-220ENST00000555585 TRPM3Q9HCF6 1732 aaPredicted RBP12.9□□□□□ -0.34
HNRNPC-220ENST00000555585 USP54Q70EL1 1684 aa12.89□□□□□ -0.35
HNRNPC-220ENST00000555585 NPHP3Q7Z494 1330 aa12.89□□□□□ -0.35
HNRNPC-220ENST00000555585 BRINP3Q76B58 766 aa12.89□□□□□ -0.35
HNRNPC-220ENST00000555585 DDX17Q92841 729 aaKnown RBP12.89□□□□□ -0.35
HNRNPC-220ENST00000555585 POLKQ9UBT6 870 aa12.89□□□□□ -0.35
HNRNPC-220ENST00000555585 SHPRHQ149N8 1683 aa12.89□□□□□ -0.35
HNRNPC-220ENST00000555585 MARF1Q9Y4F3 1742 aaKnown RBP12.88□□□□□ -0.35
HNRNPC-220ENST00000555585 RRS1Q15050 365 aaKnown RBP12.88□□□□□ -0.35
HNRNPC-220ENST00000555585 POTEHQ6S545 545 aa12.88□□□□□ -0.35
HNRNPC-220ENST00000555585 ADAMTS8Q9UP79 889 aa12.88□□□□□ -0.35
HNRNPC-220ENST00000555585 EMILIN1Q9Y6C2 1016 aa12.88□□□□□ -0.35
HNRNPC-220ENST00000555585 PLEKHG5O94827 1062 aa12.87□□□□□ -0.35
HNRNPC-220ENST00000555585 NUDCQ9Y266 331 aa12.87□□□□□ -0.35
HNRNPC-220ENST00000555585 DIAPH1O60610 1272 aaKnown RBP12.86□□□□□ -0.35
HNRNPC-220ENST00000555585 SMG6Q86US8 1419 aaKnown RBP12.86□□□□□ -0.35
HNRNPC-220ENST00000555585 COL3A1P02461 1466 aaPredicted RBP12.85□□□□□ -0.35
HNRNPC-220ENST00000555585 SBNO1A3KN83 1393 aa12.85□□□□□ -0.35
HNRNPC-220ENST00000555585 ZBTB12Q9Y330 459 aaPredicted RBP12.85□□□□□ -0.35
HNRNPC-220ENST00000555585 ALS2Q96Q42 1657 aa12.85□□□□□ -0.35
HNRNPC-220ENST00000555585 CDK12Q9NYV4 1490 aaPredicted RBP12.85□□□□□ -0.35
HNRNPC-220ENST00000555585 INSRP06213 1382 aa12.84□□□□□ -0.35
HNRNPC-220ENST00000555585 SENP3-EIF4A1A0A087X0R7 540 aa12.84□□□□□ -0.35
HNRNPC-220ENST00000555585 U2SURPO15042 1029 aaKnown RBP12.84□□□□□ -0.35
HNRNPC-220ENST00000555585 BLMP54132 1417 aaPredicted RBP12.84□□□□□ -0.35
HNRNPC-220ENST00000555585 PXDNQ92626 1479 aa12.84□□□□□ -0.35
HNRNPC-220ENST00000555585 PNPLA6Q8IY17 1366 aa12.83□□□□□ -0.36
HNRNPC-220ENST00000555585 TNS3Q68CZ2 1445 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms