RNA–Protein interactions for RNA: ENST00000555569.1

PCNX4-209, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 515 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-209ENST00000555569 GLI3P10071 1580 aa19.82■□□□□ 0.76
PCNX4-209ENST00000555569 POLR3AO14802 1390 aaPredicted RBP19.82■□□□□ 0.76
PCNX4-209ENST00000555569 RALGAPBQ86X10 1494 aa19.81■□□□□ 0.76
PCNX4-209ENST00000555569 PLEKHG3A1L390 1219 aa19.81■□□□□ 0.76
PCNX4-209ENST00000555569 ATAD2Q6PL18 1390 aa19.81■□□□□ 0.76
PCNX4-209ENST00000555569 ACEP12821 1306 aa19.8■□□□□ 0.76
PCNX4-209ENST00000555569 FAM83GA6ND36 823 aa19.8■□□□□ 0.76
PCNX4-209ENST00000555569 SRPK2P78362 688 aaKnown RBP19.8■□□□□ 0.76
PCNX4-209ENST00000555569 TRIM26Q12899 539 aaPredicted RBP19.8■□□□□ 0.76
PCNX4-209ENST00000555569 ROCK2O75116 1388 aaKnown RBP19.8■□□□□ 0.76
PCNX4-209ENST00000555569 NBPF8Q3BBV2 869 aa19.79■□□□□ 0.76
PCNX4-209ENST00000555569 COL14A1Q05707 1796 aaKnown RBP19.78■□□□□ 0.76
PCNX4-209ENST00000555569 VPS72Q15906 364 aa19.78■□□□□ 0.76
PCNX4-209ENST00000555569 CABP2Q9NPB3 220 aa19.78■□□□□ 0.76
PCNX4-209ENST00000555569 NRAPQ86VF7 1730 aa19.78■□□□□ 0.76
PCNX4-209ENST00000555569 PPIP5K1Q6PFW1 1433 aa19.77■□□□□ 0.76
PCNX4-209ENST00000555569 CCDC9Q9Y3X0 531 aaKnown RBP19.76■□□□□ 0.75
PCNX4-209ENST00000555569 PHRF1Q9P1Y6 1649 aaKnown RBP19.76■□□□□ 0.75
PCNX4-209ENST00000555569 BRWD3Q6RI45 1802 aa19.74■□□□□ 0.75
PCNX4-209ENST00000555569 BTG4Q9NY30 223 aa19.74■□□□□ 0.75
PCNX4-209ENST00000555569 EVC2Q86UK5 1308 aa19.74■□□□□ 0.75
PCNX4-209ENST00000555569 NUTM2GQ5VZR2 741 aa19.73■□□□□ 0.75
PCNX4-209ENST00000555569 TONSLQ96HA7 1378 aa19.72■□□□□ 0.75
PCNX4-209ENST00000555569 PRDM11Q9NQV5 511 aa19.72■□□□□ 0.75
PCNX4-209ENST00000555569 ABTB2Q8N961 1025 aa19.71■□□□□ 0.75
PCNX4-209ENST00000555569 MSH5O43196 834 aa19.7■□□□□ 0.74
PCNX4-209ENST00000555569 SEPT12Q8IYM1 358 aa19.7■□□□□ 0.74
PCNX4-209ENST00000555569 CABP1Q9NZU7 370 aa19.7■□□□□ 0.74
PCNX4-209ENST00000555569 BRD4O60885 1362 aaPredicted RBP19.7■□□□□ 0.74
PCNX4-209ENST00000555569 KIAA0232Q92628 1395 aa19.7■□□□□ 0.74
PCNX4-209ENST00000555569 ONECUT3O60422 494 aaPredicted RBP19.69■□□□□ 0.74
PCNX4-209ENST00000555569 ZC3H6P61129 1189 aaKnown RBP19.68■□□□□ 0.74
PCNX4-209ENST00000555569 USP6P35125 1406 aa19.68■□□□□ 0.74
PCNX4-209ENST00000555569 NRKQ7Z2Y5 1582 aa19.67■□□□□ 0.74
PCNX4-209ENST00000555569 CHRNA2Q15822 529 aa19.67■□□□□ 0.74
PCNX4-209ENST00000555569 CARD11Q9BXL7 1154 aa19.67■□□□□ 0.74
PCNX4-209ENST00000555569 EP400Q96L91 3159 aa19.67■□□□□ 0.74
PCNX4-209ENST00000555569 NLRP13Q86W25 1043 aa19.66■□□□□ 0.74
PCNX4-209ENST00000555569 CCDC125Q86Z20 511 aa19.66■□□□□ 0.74
PCNX4-209ENST00000555569 USP19O94966 1318 aa19.66■□□□□ 0.74
PCNX4-209ENST00000555569 FAM98CQ17RN3 349 aaKnown RBP19.65■□□□□ 0.74
PCNX4-209ENST00000555569 SPATA31A5Q5VU36 1347 aa19.65■□□□□ 0.74
PCNX4-209ENST00000555569 SPATA31A7Q8IWB4 1347 aa19.65■□□□□ 0.74
PCNX4-209ENST00000555569 AKAP12Q02952 1782 aa19.65■□□□□ 0.74
PCNX4-209ENST00000555569 A0A0G2JS52 829 aa19.64■□□□□ 0.73
PCNX4-209ENST00000555569 MYT1Q01538 1121 aa19.64■□□□□ 0.73
PCNX4-209ENST00000555569 SBNO2Q9Y2G9 1366 aa19.64■□□□□ 0.73
PCNX4-209ENST00000555569 KRT27Q7Z3Y8 459 aa19.63■□□□□ 0.73
PCNX4-209ENST00000555569 SSH2Q76I76 1423 aa19.62■□□□□ 0.73
PCNX4-209ENST00000555569 CPDO75976 1380 aa19.62■□□□□ 0.73
PCNX4-209ENST00000555569 GCP02774 474 aa19.61■□□□□ 0.73
PCNX4-209ENST00000555569 ZNF692Q9BU19 519 aaPredicted RBP19.61■□□□□ 0.73
PCNX4-209ENST00000555569 STRN4Q9NRL3 753 aa19.61■□□□□ 0.73
PCNX4-209ENST00000555569 PIK3C2AO00443 1686 aa19.61■□□□□ 0.73
PCNX4-209ENST00000555569 BLMP54132 1417 aaPredicted RBP19.6■□□□□ 0.73
PCNX4-209ENST00000555569 LMO7Q8WWI1 1683 aa19.6■□□□□ 0.73
PCNX4-209ENST00000555569 NLRP6P59044 892 aa19.6■□□□□ 0.73
PCNX4-209ENST00000555569 THSD7AQ9UPZ6 1657 aa19.59■□□□□ 0.73
PCNX4-209ENST00000555569 CAMTA1Q9Y6Y1 1673 aa19.59■□□□□ 0.73
PCNX4-209ENST00000555569 SPATA31A1Q5TZJ5 1347 aa19.59■□□□□ 0.73
PCNX4-209ENST00000555569 SLIT3O75094 1523 aa19.59■□□□□ 0.73
PCNX4-209ENST00000555569 EVA1CP58658 441 aa19.58■□□□□ 0.72
PCNX4-209ENST00000555569 TTC21BQ7Z4L5 1316 aa19.57■□□□□ 0.72
PCNX4-209ENST00000555569 CPSF1Q10570 1443 aaKnown RBP19.57■□□□□ 0.72
PCNX4-209ENST00000555569 MON2Q7Z3U7 1717 aa19.56■□□□□ 0.72
PCNX4-209ENST00000555569 KTN1Q86UP2 1357 aaKnown RBP19.56■□□□□ 0.72
PCNX4-209ENST00000555569 TTC21AQ8NDW8 1320 aa19.55■□□□□ 0.72
PCNX4-209ENST00000555569 SF3B2Q13435 895 aaKnown RBP19.55■□□□□ 0.72
PCNX4-209ENST00000555569 LARP1Q6PKG0 1096 aaKnown RBP19.54■□□□□ 0.72
PCNX4-209ENST00000555569 ZBTB7CA1YPR0 619 aa19.53■□□□□ 0.72
PCNX4-209ENST00000555569 USP35Q9P2H5 1018 aa19.53■□□□□ 0.72
PCNX4-209ENST00000555569 COL5A2P05997 1499 aaPredicted RBP19.53■□□□□ 0.72
PCNX4-209ENST00000555569 AATKQ6ZMQ8 1374 aa19.52■□□□□ 0.72
PCNX4-209ENST00000555569 BARGINQ6ZT62 677 aa19.51■□□□□ 0.71
PCNX4-209ENST00000555569 DEFB132Q7Z7B7 95 aa19.51■□□□□ 0.71
PCNX4-209ENST00000555569 TMC1Q8TDI8 760 aa19.51■□□□□ 0.71
PCNX4-209ENST00000555569 COL18A1P39060 1754 aa19.51■□□□□ 0.71
PCNX4-209ENST00000555569 CD163L1Q9NR16 1453 aa19.5■□□□□ 0.71
PCNX4-209ENST00000555569 FAM182BQ5T319 152 aa19.5■□□□□ 0.71
PCNX4-209ENST00000555569 TCP11L2Q8N4U5 519 aa19.5■□□□□ 0.71
PCNX4-209ENST00000555569 KCNH5Q8NCM2 988 aa19.5■□□□□ 0.71
PCNX4-209ENST00000555569 PUS7Q96PZ0 661 aaKnown RBP19.5■□□□□ 0.71
PCNX4-209ENST00000555569 ZRANB1Q9UGI0 708 aa19.5■□□□□ 0.71
PCNX4-209ENST00000555569 RGPD1P0DJD0 1748 aa19.5■□□□□ 0.71
PCNX4-209ENST00000555569 ST20-MTHFSA0A0A6YYL1 179 aa19.49■□□□□ 0.71
PCNX4-209ENST00000555569 HDGFL2Q7Z4V5 671 aaPredicted RBP19.49■□□□□ 0.71
PCNX4-209ENST00000555569 TESK2Q96S53 571 aa19.48■□□□□ 0.71
PCNX4-209ENST00000555569 SLC12A5Q9H2X9 1139 aa19.48■□□□□ 0.71
PCNX4-209ENST00000555569 THRAP3Q9Y2W1 955 aaKnown RBP19.48■□□□□ 0.71
PCNX4-209ENST00000555569 RGPD5Q99666 1765 aa19.47■□□□□ 0.71
PCNX4-209ENST00000555569 USP54Q70EL1 1684 aa19.47■□□□□ 0.71
PCNX4-209ENST00000555569 SOX12O15370 315 aa19.47■□□□□ 0.71
PCNX4-209ENST00000555569 ARHGEF25Q86VW2 580 aa19.47■□□□□ 0.71
PCNX4-209ENST00000555569 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.47■□□□□ 0.71
PCNX4-209ENST00000555569 CRB1P82279 1406 aa19.47■□□□□ 0.71
PCNX4-209ENST00000555569 NFAT5O94916 1531 aa19.46■□□□□ 0.71
PCNX4-209ENST00000555569 SLC24A1O60721 1099 aa19.46■□□□□ 0.71
PCNX4-209ENST00000555569 BAG6P46379 1132 aa19.46■□□□□ 0.71
PCNX4-209ENST00000555569 TERF2IPQ9NYB0 399 aa19.45■□□□□ 0.7
PCNX4-209ENST00000555569 PARP4Q9UKK3 1724 aaKnown RBP19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms