RNA–Protein interactions for RNA: ENST00000555506.1

KTN1-222, Transcript of kinectin 1, humanhuman

TSL 1 (best)

Gene KTN1, Length 1,464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-222ENST00000555506 RSPH6AQ9H0K4 717 aa8.64□□□□□ -1.03
KTN1-222ENST00000555506 CLK2P49760 499 aaKnown RBP8.64□□□□□ -1.03
KTN1-222ENST00000555506 QPCTQ16769 361 aa8.64□□□□□ -1.03
KTN1-222ENST00000555506 TRIM47Q96LD4 638 aa8.64□□□□□ -1.03
KTN1-222ENST00000555506 GOPCQ9HD26 462 aa8.64□□□□□ -1.03
KTN1-222ENST00000555506 TOR4AQ9NXH8 423 aa8.64□□□□□ -1.03
KTN1-222ENST00000555506 JUNDP17535 347 aa8.63□□□□□ -1.03
KTN1-222ENST00000555506 KRTAP1-3Q8IUG1 177 aa8.63□□□□□ -1.03
KTN1-222ENST00000555506 PRR7Q8TB68 274 aa8.63□□□□□ -1.03
KTN1-222ENST00000555506 CD2BP2O95400 341 aaKnown RBP8.62□□□□□ -1.03
KTN1-222ENST00000555506 SNRPBP14678 240 aaKnown RBP8.62□□□□□ -1.03
KTN1-222ENST00000555506 TUSC1Q2TAM9 212 aa8.62□□□□□ -1.03
KTN1-222ENST00000555506 SH3D19Q5HYK7 790 aa8.62□□□□□ -1.03
KTN1-222ENST00000555506 ZBTB3Q9H5J0 574 aa8.62□□□□□ -1.03
KTN1-222ENST00000555506 ATP13A2Q9NQ11 1180 aa8.62□□□□□ -1.03
KTN1-222ENST00000555506 SPDYE5A6NIY4 337 aa8.61□□□□□ -1.03
KTN1-222ENST00000555506 CFAP99D6REC4 459 aa8.61□□□□□ -1.03
KTN1-222ENST00000555506 PRPF38BQ5VTL8 546 aaKnown RBP8.61□□□□□ -1.03
KTN1-222ENST00000555506 IRF7Q92985 503 aa8.61□□□□□ -1.03
KTN1-222ENST00000555506 LILRB3O75022 631 aa8.6□□□□□ -1.03
KTN1-222ENST00000555506 KCNMA1Q12791 1236 aa8.6□□□□□ -1.03
KTN1-222ENST00000555506 SKIV2LQ15477 1246 aaKnown RBP8.6□□□□□ -1.03
KTN1-222ENST00000555506 RPIAP49247 311 aa8.59□□□□□ -1.03
KTN1-222ENST00000555506 FBXO31Q5XUX0 539 aaPredicted RBP8.59□□□□□ -1.03
KTN1-222ENST00000555506 PROCA1Q8NCQ7 364 aaPredicted RBP8.59□□□□□ -1.03
KTN1-222ENST00000555506 PSMG3-AS1Q96PY0 264 aa8.59□□□□□ -1.03
KTN1-222ENST00000555506 ARXQ96QS3 562 aa8.59□□□□□ -1.03
KTN1-222ENST00000555506 TTC24A2A3L6 582 aaPredicted RBP8.58□□□□□ -1.04
KTN1-222ENST00000555506 RTL5Q5HYW3 569 aaPredicted RBP8.58□□□□□ -1.04
KTN1-222ENST00000555506 CCDC24Q8N4L8 307 aa8.58□□□□□ -1.04
KTN1-222ENST00000555506 NUTM2BA6NNL0 878 aaPredicted RBP8.57□□□□□ -1.04
KTN1-222ENST00000555506 NUTM2EB1AL46 878 aaPredicted RBP8.57□□□□□ -1.04
KTN1-222ENST00000555506 GMPRP36959 345 aa8.57□□□□□ -1.04
KTN1-222ENST00000555506 NUTM2DQ5VT03 806 aaPredicted RBP8.57□□□□□ -1.04
KTN1-222ENST00000555506 NUTM2AQ8IVF1 878 aaPredicted RBP8.57□□□□□ -1.04
KTN1-222ENST00000555506 NUDT12Q9BQG2 462 aa8.57□□□□□ -1.04
KTN1-222ENST00000555506 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.57□□□□□ -1.04
KTN1-222ENST00000555506 SUPT5HO00267 1087 aaKnown RBP8.57□□□□□ -1.04
KTN1-222ENST00000555506 DESI1Q6ICB0 168 aa8.57□□□□□ -1.04
KTN1-222ENST00000555506 NPAS3Q8IXF0 933 aa8.57□□□□□ -1.04
KTN1-222ENST00000555506 NXF1Q9UBU9 619 aaKnown RBP8.57□□□□□ -1.04
KTN1-222ENST00000555506 PTPRNQ16849 979 aa8.56□□□□□ -1.04
KTN1-222ENST00000555506 ZMYND15Q9H091 742 aa8.56□□□□□ -1.04
KTN1-222ENST00000555506 PTCRAQ6ISU1 281 aaPredicted RBP8.55□□□□□ -1.04
KTN1-222ENST00000555506 PCMTD1Q96MG8 357 aaPredicted RBP8.55□□□□□ -1.04
KTN1-222ENST00000555506 ZBTB24O43167 697 aaPredicted RBP8.54□□□□□ -1.04
KTN1-222ENST00000555506 CCNYL3P0C7X3 344 aa8.54□□□□□ -1.04
KTN1-222ENST00000555506 LYPD8Q6UX82 237 aa8.54□□□□□ -1.04
KTN1-222ENST00000555506 TSC1Q92574 1164 aa8.54□□□□□ -1.04
KTN1-222ENST00000555506 PER1O15534 1290 aaPredicted RBP8.53□□□□□ -1.04
KTN1-222ENST00000555506 GSK3AP49840 483 aa8.53□□□□□ -1.04
KTN1-222ENST00000555506 TRIM32Q13049 653 aa8.53□□□□□ -1.04
KTN1-222ENST00000555506 EVA1BQ9NVM1 165 aa8.53□□□□□ -1.04
KTN1-222ENST00000555506 FLIIQ13045 1269 aa8.52□□□□□ -1.05
KTN1-222ENST00000555506 ATP1B4Q9UN42 357 aaPredicted RBP8.52□□□□□ -1.05
KTN1-222ENST00000555506 PPP2R2DQ66LE6 453 aa8.51□□□□□ -1.05
KTN1-222ENST00000555506 TMEM151AQ8N4L1 468 aa8.51□□□□□ -1.05
KTN1-222ENST00000555506 KCNH2Q12809 1159 aa8.51□□□□□ -1.05
KTN1-222ENST00000555506 F12P00748 615 aaPredicted RBP8.5□□□□□ -1.05
KTN1-222ENST00000555506 MAP10Q9P2G4 905 aa8.5□□□□□ -1.05
KTN1-222ENST00000555506 SKOR1P84550 965 aa8.49□□□□□ -1.05
KTN1-222ENST00000555506 CTDSPL2Q05D32 466 aa8.49□□□□□ -1.05
KTN1-222ENST00000555506 HELBQ8NG08 1087 aaPredicted RBP8.49□□□□□ -1.05
KTN1-222ENST00000555506 UNC93B1Q9H1C4 597 aa8.49□□□□□ -1.05
KTN1-222ENST00000555506 CTHP32929 405 aa8.48□□□□□ -1.05
KTN1-222ENST00000555506 HOMEZQ8IX15 550 aa8.47□□□□□ -1.05
KTN1-222ENST00000555506 SNIP1Q8TAD8 396 aaKnown RBP8.47□□□□□ -1.05
KTN1-222ENST00000555506 RFC5P40937 340 aa8.45□□□□□ -1.06
KTN1-222ENST00000555506 LRRN4Q8WUT4 740 aa8.45□□□□□ -1.06
KTN1-222ENST00000555506 WNT7AO00755 349 aa8.45□□□□□ -1.06
KTN1-222ENST00000555506 AP1G2O75843 785 aa8.45□□□□□ -1.06
KTN1-222ENST00000555506 WNT7BP56706 349 aa8.45□□□□□ -1.06
KTN1-222ENST00000555506 SH3BP2P78314 561 aa8.45□□□□□ -1.06
KTN1-222ENST00000555506 LINC01559Q495D7 138 aa8.45□□□□□ -1.06
KTN1-222ENST00000555506 BAP1Q92560 729 aa8.45□□□□□ -1.06
KTN1-222ENST00000555506 GDF11O95390 407 aa8.44□□□□□ -1.06
KTN1-222ENST00000555506 SMPD1P17405 629 aa8.44□□□□□ -1.06
KTN1-222ENST00000555506 RC3H1Q5TC82 1133 aaKnown RBP8.44□□□□□ -1.06
KTN1-222ENST00000555506 MRGPRX2Q96LB1 330 aa8.43□□□□□ -1.06
KTN1-222ENST00000555506 H3BM21 787 aa8.42□□□□□ -1.06
KTN1-222ENST00000555506 ZNF511Q8NB15 262 aa8.42□□□□□ -1.06
KTN1-222ENST00000555506 RNF225M0QZC1 329 aaPredicted RBP8.41□□□□□ -1.06
KTN1-222ENST00000555506 USP17L8P0C7I0 530 aa8.41□□□□□ -1.06
KTN1-222ENST00000555506 MCM6Q14566 821 aa8.4□□□□□ -1.06
KTN1-222ENST00000555506 HMX1Q9NP08 348 aaPredicted RBP8.4□□□□□ -1.06
KTN1-222ENST00000555506 RASSF7Q02833 373 aa8.39□□□□□ -1.07
KTN1-222ENST00000555506 NR6A1Q15406 480 aa8.39□□□□□ -1.07
KTN1-222ENST00000555506 A6NJR5 290 aa8.38□□□□□ -1.07
KTN1-222ENST00000555506 UBTFP17480 764 aaKnown RBP8.38□□□□□ -1.07
KTN1-222ENST00000555506 EPS8L1Q8TE68 723 aa8.38□□□□□ -1.07
KTN1-222ENST00000555506 SIAH2O43255 324 aa8.38□□□□□ -1.07
KTN1-222ENST00000555506 IGHA1P01876 353 aa8.38□□□□□ -1.07
KTN1-222ENST00000555506 TMEM259Q4ZIN3 620 aa8.38□□□□□ -1.07
KTN1-222ENST00000555506 LCE3BQ5TA77 95 aa8.38□□□□□ -1.07
KTN1-222ENST00000555506 EHBP1Q8NDI1 1231 aa8.38□□□□□ -1.07
KTN1-222ENST00000555506 FOXJ1Q92949 421 aa8.38□□□□□ -1.07
KTN1-222ENST00000555506 J3QL48 77 aa8.36□□□□□ -1.07
KTN1-222ENST00000555506 VEGFBP49765 207 aa8.36□□□□□ -1.07
KTN1-222ENST00000555506 C4orf48Q5BLP8 95 aa8.36□□□□□ -1.07
KTN1-222ENST00000555506 CLUAP1Q96AJ1 413 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms