RNA–Protein interactions for RNA: ENST00000555244.1

CPSF2-204, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 3

Gene CPSF2, Length 806 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-204ENST00000555244 FLIIQ13045 1269 aa6.94□□□□□ -1.3
CPSF2-204ENST00000555244 GRIPAP1Q4V328 841 aa6.94□□□□□ -1.3
CPSF2-204ENST00000555244 MAPKBP1O60336 1514 aa6.94□□□□□ -1.3
CPSF2-204ENST00000555244 TUSC1Q2TAM9 212 aa6.93□□□□□ -1.3
CPSF2-204ENST00000555244 PROCA1Q8NCQ7 364 aaPredicted RBP6.93□□□□□ -1.3
CPSF2-204ENST00000555244 ADCY10Q96PN6 1610 aa6.92□□□□□ -1.3
CPSF2-204ENST00000555244 SPTLC1O15269 473 aa6.92□□□□□ -1.3
CPSF2-204ENST00000555244 RSBN1LQ6PCB5 846 aaPredicted RBP6.92□□□□□ -1.3
CPSF2-204ENST00000555244 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.92□□□□□ -1.3
CPSF2-204ENST00000555244 ABCC10Q5T3U5 1492 aa6.92□□□□□ -1.3
CPSF2-204ENST00000555244 MOXD2PA6NHM9 499 aa6.91□□□□□ -1.3
CPSF2-204ENST00000555244 PPEF1O14829 653 aaPredicted RBP6.91□□□□□ -1.3
CPSF2-204ENST00000555244 NR1I2O75469 434 aa6.91□□□□□ -1.3
CPSF2-204ENST00000555244 S1PR4O95977 384 aa6.91□□□□□ -1.3
CPSF2-204ENST00000555244 LIMD1Q9UGP4 676 aa6.91□□□□□ -1.3
CPSF2-204ENST00000555244 UACAQ9BZF9 1416 aa6.91□□□□□ -1.3
CPSF2-204ENST00000555244 RNF223E7ERA6 249 aa6.9□□□□□ -1.3
CPSF2-204ENST00000555244 HOXA2O43364 376 aa6.9□□□□□ -1.3
CPSF2-204ENST00000555244 FUT2Q10981 343 aa6.9□□□□□ -1.3
CPSF2-204ENST00000555244 Q6ZNB5 142 aa6.9□□□□□ -1.3
CPSF2-204ENST00000555244 SCUBE3Q8IX30 993 aa6.9□□□□□ -1.3
CPSF2-204ENST00000555244 GOLGA3Q08378 1498 aa6.9□□□□□ -1.31
CPSF2-204ENST00000555244 ABCC2Q92887 1545 aa6.9□□□□□ -1.31
CPSF2-204ENST00000555244 KDM5BQ9UGL1 1544 aa6.9□□□□□ -1.31
CPSF2-204ENST00000555244 GFRA3O60609 400 aa6.89□□□□□ -1.31
CPSF2-204ENST00000555244 NDUFV2P19404 249 aa6.89□□□□□ -1.31
CPSF2-204ENST00000555244 PRPF38BQ5VTL8 546 aaKnown RBP6.89□□□□□ -1.31
CPSF2-204ENST00000555244 PPP2R2DQ66LE6 453 aa6.89□□□□□ -1.31
CPSF2-204ENST00000555244 KIAA0556O60303 1618 aa6.88□□□□□ -1.31
CPSF2-204ENST00000555244 NUTM2BA6NNL0 878 aaPredicted RBP6.88□□□□□ -1.31
CPSF2-204ENST00000555244 NUTM2EB1AL46 878 aaPredicted RBP6.88□□□□□ -1.31
CPSF2-204ENST00000555244 ADH1BP00325 375 aa6.88□□□□□ -1.31
CPSF2-204ENST00000555244 FDX1P10109 184 aa6.88□□□□□ -1.31
CPSF2-204ENST00000555244 ATP6V1AP38606 617 aa6.88□□□□□ -1.31
CPSF2-204ENST00000555244 CSPP1Q1MSJ5 1256 aa6.88□□□□□ -1.31
CPSF2-204ENST00000555244 TMEM259Q4ZIN3 620 aa6.88□□□□□ -1.31
CPSF2-204ENST00000555244 NUTM2DQ5VT03 806 aaPredicted RBP6.88□□□□□ -1.31
CPSF2-204ENST00000555244 NUTM2AQ8IVF1 878 aaPredicted RBP6.88□□□□□ -1.31
CPSF2-204ENST00000555244 V9GY48 417 aaPredicted RBP6.88□□□□□ -1.31
CPSF2-204ENST00000555244 CTTNBP2Q8WZ74 1663 aa6.87□□□□□ -1.31
CPSF2-204ENST00000555244 PLB1Q6P1J6 1458 aa6.87□□□□□ -1.31
CPSF2-204ENST00000555244 RFC5P40937 340 aa6.87□□□□□ -1.31
CPSF2-204ENST00000555244 BANK1Q8NDB2 785 aa6.87□□□□□ -1.31
CPSF2-204ENST00000555244 SPSB2Q99619 263 aa6.87□□□□□ -1.31
CPSF2-204ENST00000555244 SLC6A16Q9GZN6 736 aa6.87□□□□□ -1.31
CPSF2-204ENST00000555244 ZBTB3Q9H5J0 574 aa6.87□□□□□ -1.31
CPSF2-204ENST00000555244 KIF13AQ9H1H9 1805 aa6.87□□□□□ -1.31
CPSF2-204ENST00000555244 DIP2BQ9P265 1576 aa6.86□□□□□ -1.31
CPSF2-204ENST00000555244 LILRB3O75022 631 aa6.86□□□□□ -1.31
CPSF2-204ENST00000555244 ABCA8O94911 1581 aa6.86□□□□□ -1.31
CPSF2-204ENST00000555244 GLI2P10070 1586 aa6.86□□□□□ -1.31
CPSF2-204ENST00000555244 SPDYE5A6NIY4 337 aa6.85□□□□□ -1.31
CPSF2-204ENST00000555244 SLC19A1P41440 591 aa6.85□□□□□ -1.31
CPSF2-204ENST00000555244 FAM69CQ0P6D2 419 aa6.85□□□□□ -1.31
CPSF2-204ENST00000555244 MTMR2Q13614 643 aa6.85□□□□□ -1.31
CPSF2-204ENST00000555244 MORN1Q5T089 497 aa6.85□□□□□ -1.31
CPSF2-204ENST00000555244 ZMYND15Q9H091 742 aa6.85□□□□□ -1.31
CPSF2-204ENST00000555244 SLC27A5Q9Y2P5 690 aa6.85□□□□□ -1.31
CPSF2-204ENST00000555244 PCDHB15Q9Y5E8 787 aa6.85□□□□□ -1.31
CPSF2-204ENST00000555244 ASXL2Q76L83 1435 aa6.84□□□□□ -1.31
CPSF2-204ENST00000555244 KIF21BO75037 1637 aa6.84□□□□□ -1.31
CPSF2-204ENST00000555244 SAMD9Q5K651 1589 aa6.84□□□□□ -1.31
CPSF2-204ENST00000555244 QPCTQ16769 361 aa6.84□□□□□ -1.31
CPSF2-204ENST00000555244 Q3C1V9 767 aa6.84□□□□□ -1.31
CPSF2-204ENST00000555244 ANKLE1Q8NAG6 615 aa6.84□□□□□ -1.31
CPSF2-204ENST00000555244 C6orf229H3BNL8 230 aa6.83□□□□□ -1.32
CPSF2-204ENST00000555244 APBB1O00213 710 aa6.83□□□□□ -1.32
CPSF2-204ENST00000555244 UBTFP17480 764 aaKnown RBP6.83□□□□□ -1.32
CPSF2-204ENST00000555244 HRCP23327 699 aa6.83□□□□□ -1.32
CPSF2-204ENST00000555244 MCM6Q14566 821 aa6.83□□□□□ -1.32
CPSF2-204ENST00000555244 EMID1Q96A84 441 aaPredicted RBP6.83□□□□□ -1.32
CPSF2-204ENST00000555244 PDZRN3Q9UPQ7 1066 aa6.83□□□□□ -1.32
CPSF2-204ENST00000555244 EPRSP07814 1512 aaKnown RBP6.82□□□□□ -1.32
CPSF2-204ENST00000555244 AP1G2O75843 785 aa6.82□□□□□ -1.32
CPSF2-204ENST00000555244 FMNL1O95466 1100 aaPredicted RBP6.82□□□□□ -1.32
CPSF2-204ENST00000555244 GUCA2AQ02747 115 aa6.82□□□□□ -1.32
CPSF2-204ENST00000555244 LAPTM4AQ15012 233 aa6.82□□□□□ -1.32
CPSF2-204ENST00000555244 LIAT1Q6ZQX7 453 aa6.82□□□□□ -1.32
CPSF2-204ENST00000555244 CABLES1Q8TDN4 633 aa6.82□□□□□ -1.32
CPSF2-204ENST00000555244 HLA-CQ95604 372 aa6.82□□□□□ -1.32
CPSF2-204ENST00000555244 PCDHGC3Q9UN70 934 aa6.82□□□□□ -1.32
CPSF2-204ENST00000555244 RAD21O60216 631 aa6.81□□□□□ -1.32
CPSF2-204ENST00000555244 RTL5Q5HYW3 569 aaPredicted RBP6.81□□□□□ -1.32
CPSF2-204ENST00000555244 PLA2G2CQ5R387 149 aa6.81□□□□□ -1.32
CPSF2-204ENST00000555244 RNF19BQ6ZMZ0 732 aa6.81□□□□□ -1.32
CPSF2-204ENST00000555244 HELBQ8NG08 1087 aaPredicted RBP6.81□□□□□ -1.32
CPSF2-204ENST00000555244 THAP11Q96EK4 314 aa6.81□□□□□ -1.32
CPSF2-204ENST00000555244 PRM3Q9NNZ6 103 aa6.81□□□□□ -1.32
CPSF2-204ENST00000555244 PRDM9Q9NQV7 894 aa6.81□□□□□ -1.32
CPSF2-204ENST00000555244 ATP10BO94823 1461 aa6.8□□□□□ -1.32
CPSF2-204ENST00000555244 WDR7Q9Y4E6 1490 aa6.8□□□□□ -1.32
CPSF2-204ENST00000555244 ZCCHC11Q5TAX3 1644 aaKnown RBP6.8□□□□□ -1.32
CPSF2-204ENST00000555244 NRG2O14511 850 aaPredicted RBP6.8□□□□□ -1.32
CPSF2-204ENST00000555244 SPRYD7Q5W111 196 aa6.8□□□□□ -1.32
CPSF2-204ENST00000555244 FBXO31Q5XUX0 539 aaPredicted RBP6.8□□□□□ -1.32
CPSF2-204ENST00000555244 FAM9AQ8IZU1 332 aaPredicted RBP6.8□□□□□ -1.32
CPSF2-204ENST00000555244 FAM160A2Q8N612 972 aaPredicted RBP6.8□□□□□ -1.32
CPSF2-204ENST00000555244 EFCAB5A4FU69 1503 aa6.8□□□□□ -1.32
CPSF2-204ENST00000555244 ZNF697Q5TEC3 545 aa6.79□□□□□ -1.32
CPSF2-204ENST00000555244 BRICD5Q6PL45 260 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 128.4 ms