RNA–Protein interactions for RNA: ENST00000555082.5

PRKCH-211, Transcript of protein kinase C eta, humanhuman

TSL 1 (best) BASIC

Gene PRKCH, Length 2,932 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-211ENST00000555082 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.04□□□□□ -0.32
PRKCH-211ENST00000555082 LMTK3Q96Q04 1460 aa13.04□□□□□ -0.32
PRKCH-211ENST00000555082 BRD4O60885 1362 aaPredicted RBP13.04□□□□□ -0.32
PRKCH-211ENST00000555082 PIK3R4Q99570 1358 aa13.04□□□□□ -0.32
PRKCH-211ENST00000555082 ATP7BP35670 1465 aa13.03□□□□□ -0.32
PRKCH-211ENST00000555082 XRN1Q8IZH2 1706 aaKnown RBP13.03□□□□□ -0.32
PRKCH-211ENST00000555082 PROSER2Q86WR7 435 aaPredicted RBP13.03□□□□□ -0.32
PRKCH-211ENST00000555082 NME9Q86XW9 330 aa13.03□□□□□ -0.32
PRKCH-211ENST00000555082 PDE4AP27815 886 aa13.02□□□□□ -0.32
PRKCH-211ENST00000555082 ACEP12821 1306 aa13.02□□□□□ -0.33
PRKCH-211ENST00000555082 NPC1L1Q9UHC9 1359 aa13.02□□□□□ -0.33
PRKCH-211ENST00000555082 NINLQ9Y2I6 1382 aa13.01□□□□□ -0.33
PRKCH-211ENST00000555082 RRP1P56182 461 aaKnown RBP13.01□□□□□ -0.33
PRKCH-211ENST00000555082 NKTRP30414 1462 aaKnown RBP13□□□□□ -0.33
PRKCH-211ENST00000555082 PLIN1O60240 522 aa12.99□□□□□ -0.33
PRKCH-211ENST00000555082 MTHFSP49914 203 aa12.99□□□□□ -0.33
PRKCH-211ENST00000555082 NGDNQ8NEJ9 315 aaKnown RBP12.99□□□□□ -0.33
PRKCH-211ENST00000555082 CHD2O14647 1828 aaKnown RBP12.99□□□□□ -0.33
PRKCH-211ENST00000555082 CPSF1Q10570 1443 aaKnown RBP12.99□□□□□ -0.33
PRKCH-211ENST00000555082 RCAN3Q9UKA8 241 aa12.99□□□□□ -0.33
PRKCH-211ENST00000555082 ADAMTS8Q9UP79 889 aa12.98□□□□□ -0.33
PRKCH-211ENST00000555082 SOX12O15370 315 aa12.98□□□□□ -0.33
PRKCH-211ENST00000555082 SLC4A3P48751 1232 aa12.98□□□□□ -0.33
PRKCH-211ENST00000555082 ZNF335Q9H4Z2 1342 aaPredicted RBP12.97□□□□□ -0.33
PRKCH-211ENST00000555082 PLEKHG3A1L390 1219 aa12.97□□□□□ -0.33
PRKCH-211ENST00000555082 TCERG1O14776 1098 aaKnown RBP12.97□□□□□ -0.33
PRKCH-211ENST00000555082 ADGRB2O60241 1585 aa12.97□□□□□ -0.33
PRKCH-211ENST00000555082 CDCA7LQ96GN5 454 aa12.97□□□□□ -0.33
PRKCH-211ENST00000555082 ORAI2Q96SN7 254 aa12.97□□□□□ -0.33
PRKCH-211ENST00000555082 PPM1GO15355 546 aaPredicted RBP12.96□□□□□ -0.33
PRKCH-211ENST00000555082 PLEKHG5O94827 1062 aa12.96□□□□□ -0.33
PRKCH-211ENST00000555082 ESCO1Q5FWF5 840 aa12.96□□□□□ -0.33
PRKCH-211ENST00000555082 NUTM2GQ5VZR2 741 aa12.96□□□□□ -0.33
PRKCH-211ENST00000555082 XPCQ01831 940 aaPredicted RBP12.96□□□□□ -0.33
PRKCH-211ENST00000555082 BACH2Q9BYV9 841 aa12.96□□□□□ -0.33
PRKCH-211ENST00000555082 USP32Q8NFA0 1604 aa12.96□□□□□ -0.33
PRKCH-211ENST00000555082 TMEM94Q12767 1356 aa12.96□□□□□ -0.33
PRKCH-211ENST00000555082 CCDC146Q8IYE0 955 aa12.95□□□□□ -0.34
PRKCH-211ENST00000555082 TTC21BQ7Z4L5 1316 aa12.95□□□□□ -0.34
PRKCH-211ENST00000555082 ADGRL3Q9HAR2 1447 aa12.94□□□□□ -0.34
PRKCH-211ENST00000555082 CDC42BPGQ6DT37 1551 aa12.94□□□□□ -0.34
PRKCH-211ENST00000555082 BRPF3Q9ULD4 1205 aa12.94□□□□□ -0.34
PRKCH-211ENST00000555082 NALCNQ8IZF0 1738 aa12.94□□□□□ -0.34
PRKCH-211ENST00000555082 WDR43Q15061 677 aaKnown RBP eCLIP12.94□□□□□ -0.34
PRKCH-211ENST00000555082 ZNF692Q9BU19 519 aaPredicted RBP12.94□□□□□ -0.34
PRKCH-211ENST00000555082 EDC4Q6P2E9 1401 aaKnown RBP12.94□□□□□ -0.34
PRKCH-211ENST00000555082 RGPD8O14715 1765 aaPredicted RBP12.93□□□□□ -0.34
PRKCH-211ENST00000555082 RRS1Q15050 365 aaKnown RBP12.93□□□□□ -0.34
PRKCH-211ENST00000555082 PHF8Q9UPP1 1060 aa12.93□□□□□ -0.34
PRKCH-211ENST00000555082 EMILIN1Q9Y6C2 1016 aa12.93□□□□□ -0.34
PRKCH-211ENST00000555082 DDX17Q92841 729 aaKnown RBP12.92□□□□□ -0.34
PRKCH-211ENST00000555082 NSD2O96028 1365 aa12.92□□□□□ -0.34
PRKCH-211ENST00000555082 USP6P35125 1406 aa12.92□□□□□ -0.34
PRKCH-211ENST00000555082 FOXO3O43524 673 aa12.92□□□□□ -0.34
PRKCH-211ENST00000555082 STRCQ7RTU9 1775 aa12.92□□□□□ -0.34
PRKCH-211ENST00000555082 STRCP1A6NGW2 1772 aa12.92□□□□□ -0.34
PRKCH-211ENST00000555082 COG3Q96JB2 828 aa12.92□□□□□ -0.34
PRKCH-211ENST00000555082 C19orf44Q9H6X5 657 aa12.91□□□□□ -0.34
PRKCH-211ENST00000555082 CRBNQ96SW2 442 aa12.9□□□□□ -0.34
PRKCH-211ENST00000555082 POLKQ9UBT6 870 aa12.9□□□□□ -0.34
PRKCH-211ENST00000555082 NWD1Q149M9 1564 aa12.9□□□□□ -0.34
PRKCH-211ENST00000555082 TOPAZ1Q8N9V7 1692 aa12.89□□□□□ -0.35
PRKCH-211ENST00000555082 POLR3AO14802 1390 aaPredicted RBP12.89□□□□□ -0.35
PRKCH-211ENST00000555082 ANKARQ7Z5J8 1434 aa12.89□□□□□ -0.35
PRKCH-211ENST00000555082 ATF3P18847 181 aa12.89□□□□□ -0.35
PRKCH-211ENST00000555082 FMN2Q9NZ56 1722 aa12.88□□□□□ -0.35
PRKCH-211ENST00000555082 U2SURPO15042 1029 aaKnown RBP12.88□□□□□ -0.35
PRKCH-211ENST00000555082 NLRP6P59044 892 aa12.88□□□□□ -0.35
PRKCH-211ENST00000555082 PSME1Q06323 249 aa12.88□□□□□ -0.35
PRKCH-211ENST00000555082 SSH2Q76I76 1423 aa12.87□□□□□ -0.35
PRKCH-211ENST00000555082 LMOD2Q6P5Q4 547 aa12.87□□□□□ -0.35
PRKCH-211ENST00000555082 ABTB2Q8N961 1025 aa12.87□□□□□ -0.35
PRKCH-211ENST00000555082 CFAP53Q96M91 514 aa12.87□□□□□ -0.35
PRKCH-211ENST00000555082 U2AF1L5P0DN76 240 aaPredicted RBP12.87□□□□□ -0.35
PRKCH-211ENST00000555082 U2AF1Q01081 240 aaKnown RBP eCLIP12.87□□□□□ -0.35
PRKCH-211ENST00000555082 USP35Q9P2H5 1018 aa12.87□□□□□ -0.35
PRKCH-211ENST00000555082 APAF1O14727 1248 aa12.86□□□□□ -0.35
PRKCH-211ENST00000555082 MS4A1P11836 297 aa12.86□□□□□ -0.35
PRKCH-211ENST00000555082 C20orf194Q5TEA3 1177 aa12.86□□□□□ -0.35
PRKCH-211ENST00000555082 RRP7AQ9Y3A4 280 aaKnown RBP12.86□□□□□ -0.35
PRKCH-211ENST00000555082 ITSN1Q15811 1721 aa12.86□□□□□ -0.35
PRKCH-211ENST00000555082 MON2Q7Z3U7 1717 aa12.86□□□□□ -0.35
PRKCH-211ENST00000555082 NFKBIBQ15653 356 aa12.85□□□□□ -0.35
PRKCH-211ENST00000555082 NEUROD2Q15784 382 aa12.85□□□□□ -0.35
PRKCH-211ENST00000555082 AKAP12Q02952 1782 aa12.85□□□□□ -0.35
PRKCH-211ENST00000555082 C1orf167Q5SNV9 1468 aa12.85□□□□□ -0.35
PRKCH-211ENST00000555082 KIF20BQ96Q89 1820 aa12.85□□□□□ -0.35
PRKCH-211ENST00000555082 FRAT1Q92837 279 aaPredicted RBP12.84□□□□□ -0.35
PRKCH-211ENST00000555082 BLMP54132 1417 aaPredicted RBP12.84□□□□□ -0.35
PRKCH-211ENST00000555082 GSE1Q14687 1217 aa12.84□□□□□ -0.35
PRKCH-211ENST00000555082 DAXXQ9UER7 740 aaPredicted RBP12.84□□□□□ -0.35
PRKCH-211ENST00000555082 OVOS2A0A0J9YW53 1432 aa12.83□□□□□ -0.36
PRKCH-211ENST00000555082 OVOS2Q6IE36 1432 aa12.83□□□□□ -0.36
PRKCH-211ENST00000555082 ZBTB7CA1YPR0 619 aa12.83□□□□□ -0.36
PRKCH-211ENST00000555082 DIAPH1O60610 1272 aaKnown RBP12.83□□□□□ -0.36
PRKCH-211ENST00000555082 EIF5BO60841 1220 aaKnown RBP12.83□□□□□ -0.36
PRKCH-211ENST00000555082 LRRC7Q96NW7 1537 aa12.83□□□□□ -0.36
PRKCH-211ENST00000555082 MST1RQ04912 1400 aa12.83□□□□□ -0.36
PRKCH-211ENST00000555082 TTC21AQ8NDW8 1320 aa12.83□□□□□ -0.36
PRKCH-211ENST00000555082 MSH6P52701 1360 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms