RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 CARD14Q9BXL6 1004 aa22.61■■□□□ 1.21
SPTLC2-203ENST00000554901 TTC21BQ7Z4L5 1316 aa22.61■■□□□ 1.21
SPTLC2-203ENST00000554901 PHLPP1O60346 1717 aa22.61■■□□□ 1.21
SPTLC2-203ENST00000554901 TRPM3Q9HCF6 1732 aaPredicted RBP22.61■■□□□ 1.21
SPTLC2-203ENST00000554901 XPCQ01831 940 aaPredicted RBP22.6■■□□□ 1.21
SPTLC2-203ENST00000554901 COL16A1Q07092 1604 aaPredicted RBP22.6■■□□□ 1.21
SPTLC2-203ENST00000554901 SPATA31A3Q5VYP0 1347 aa22.6■■□□□ 1.21
SPTLC2-203ENST00000554901 TNS3Q68CZ2 1445 aa22.6■■□□□ 1.21
SPTLC2-203ENST00000554901 NSD3Q9BZ95 1437 aa22.58■■□□□ 1.21
SPTLC2-203ENST00000554901 ARHGEF10O15013 1369 aa22.58■■□□□ 1.21
SPTLC2-203ENST00000554901 PER1O15534 1290 aaPredicted RBP22.57■■□□□ 1.2
SPTLC2-203ENST00000554901 CGNL1Q0VF96 1302 aa22.57■■□□□ 1.2
SPTLC2-203ENST00000554901 PAK3O75914 559 aaPredicted RBP22.57■■□□□ 1.2
SPTLC2-203ENST00000554901 DDX10Q13206 875 aaKnown RBP22.57■■□□□ 1.2
SPTLC2-203ENST00000554901 KNSTRNQ9Y448 316 aa22.57■■□□□ 1.2
SPTLC2-203ENST00000554901 HSPA1LP34931 641 aa22.55■■□□□ 1.2
SPTLC2-203ENST00000554901 ALS2Q96Q42 1657 aa22.55■■□□□ 1.2
SPTLC2-203ENST00000554901 ABTB2Q8N961 1025 aa22.54■■□□□ 1.2
SPTLC2-203ENST00000554901 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.53■■□□□ 1.2
SPTLC2-203ENST00000554901 NSD2O96028 1365 aa22.53■■□□□ 1.2
SPTLC2-203ENST00000554901 USP31Q70CQ4 1352 aa22.53■■□□□ 1.2
SPTLC2-203ENST00000554901 NPC1L1Q9UHC9 1359 aa22.52■■□□□ 1.2
SPTLC2-203ENST00000554901 NLRP13Q86W25 1043 aa22.52■■□□□ 1.19
SPTLC2-203ENST00000554901 JCADQ9P266 1359 aa22.51■■□□□ 1.19
SPTLC2-203ENST00000554901 FYB1O15117 783 aa22.51■■□□□ 1.19
SPTLC2-203ENST00000554901 LMOD2Q6P5Q4 547 aa22.5■■□□□ 1.19
SPTLC2-203ENST00000554901 PNPLA6Q8IY17 1366 aa22.5■■□□□ 1.19
SPTLC2-203ENST00000554901 PIK3C2AO00443 1686 aa22.5■■□□□ 1.19
SPTLC2-203ENST00000554901 MED1Q15648 1581 aaPredicted RBP22.49■■□□□ 1.19
SPTLC2-203ENST00000554901 NLRP6P59044 892 aa22.49■■□□□ 1.19
SPTLC2-203ENST00000554901 AMER1Q5JTC6 1135 aaPredicted RBP22.49■■□□□ 1.19
SPTLC2-203ENST00000554901 NME9Q86XW9 330 aa22.49■■□□□ 1.19
SPTLC2-203ENST00000554901 USP54Q70EL1 1684 aa22.48■■□□□ 1.19
SPTLC2-203ENST00000554901 COL22A1Q8NFW1 1626 aaPredicted RBP22.48■■□□□ 1.19
SPTLC2-203ENST00000554901 OVOS2A0A0J9YW53 1432 aa22.47■■□□□ 1.19
SPTLC2-203ENST00000554901 OVOS2Q6IE36 1432 aa22.47■■□□□ 1.19
SPTLC2-203ENST00000554901 SHPRHQ149N8 1683 aa22.47■■□□□ 1.19
SPTLC2-203ENST00000554901 USP19O94966 1318 aa22.47■■□□□ 1.19
SPTLC2-203ENST00000554901 COG3Q96JB2 828 aa22.47■■□□□ 1.19
SPTLC2-203ENST00000554901 KIF20BQ96Q89 1820 aa22.46■■□□□ 1.19
SPTLC2-203ENST00000554901 GGNBP2Q9H3C7 697 aa22.45■■□□□ 1.18
SPTLC2-203ENST00000554901 SPATA31A6Q5VVP1 1343 aa22.44■■□□□ 1.18
SPTLC2-203ENST00000554901 KCNH5Q8NCM2 988 aa22.43■■□□□ 1.18
SPTLC2-203ENST00000554901 SLIT3O75094 1523 aa22.42■■□□□ 1.18
SPTLC2-203ENST00000554901 NUTM2GQ5VZR2 741 aa22.42■■□□□ 1.18
SPTLC2-203ENST00000554901 ANKRD26Q9UPS8 1709 aa22.41■■□□□ 1.18
SPTLC2-203ENST00000554901 ZRANB1Q9UGI0 708 aa22.41■■□□□ 1.18
SPTLC2-203ENST00000554901 MARF1Q9Y4F3 1742 aaKnown RBP22.39■■□□□ 1.18
SPTLC2-203ENST00000554901 CRYBG1Q9Y4K1 1723 aa22.39■■□□□ 1.18
SPTLC2-203ENST00000554901 GCP02774 474 aa22.39■■□□□ 1.17
SPTLC2-203ENST00000554901 MORC1Q86VD1 984 aa22.38■■□□□ 1.17
SPTLC2-203ENST00000554901 CC2D1BQ5T0F9 858 aaKnown RBP22.37■■□□□ 1.17
SPTLC2-203ENST00000554901 PHRF1Q9P1Y6 1649 aaKnown RBP22.37■■□□□ 1.17
SPTLC2-203ENST00000554901 AATKQ6ZMQ8 1374 aa22.37■■□□□ 1.17
SPTLC2-203ENST00000554901 HAP1P54257 671 aaPredicted RBP22.36■■□□□ 1.17
SPTLC2-203ENST00000554901 CABLES1Q8TDN4 633 aa22.36■■□□□ 1.17
SPTLC2-203ENST00000554901 ABCA3Q99758 1704 aa22.36■■□□□ 1.17
SPTLC2-203ENST00000554901 NFAT5O94916 1531 aa22.35■■□□□ 1.17
SPTLC2-203ENST00000554901 CPDO75976 1380 aa22.34■■□□□ 1.17
SPTLC2-203ENST00000554901 RALBP1Q15311 655 aa22.33■■□□□ 1.17
SPTLC2-203ENST00000554901 ILDR1Q86SU0 546 aaPredicted RBP22.33■■□□□ 1.17
SPTLC2-203ENST00000554901 PARD3Q8TEW0 1356 aa22.33■■□□□ 1.16
SPTLC2-203ENST00000554901 ARHGEF25Q86VW2 580 aa22.31■■□□□ 1.16
SPTLC2-203ENST00000554901 KIF24Q5T7B8 1368 aa22.3■■□□□ 1.16
SPTLC2-203ENST00000554901 PLEKHG5O94827 1062 aa22.3■■□□□ 1.16
SPTLC2-203ENST00000554901 NUTM2BA6NNL0 878 aaPredicted RBP22.29■■□□□ 1.16
SPTLC2-203ENST00000554901 NUTM2EB1AL46 878 aaPredicted RBP22.29■■□□□ 1.16
SPTLC2-203ENST00000554901 NUTM2AQ8IVF1 878 aaPredicted RBP22.29■■□□□ 1.16
SPTLC2-203ENST00000554901 ABCC6O95255 1503 aa22.28■■□□□ 1.16
SPTLC2-203ENST00000554901 ZC3H6P61129 1189 aaKnown RBP22.28■■□□□ 1.16
SPTLC2-203ENST00000554901 PRKRIP1Q9H875 184 aaPredicted RBP22.28■■□□□ 1.16
SPTLC2-203ENST00000554901 KIAA0232Q92628 1395 aa22.28■■□□□ 1.16
SPTLC2-203ENST00000554901 SOX12O15370 315 aa22.27■■□□□ 1.16
SPTLC2-203ENST00000554901 ANP32CO43423 234 aa22.27■■□□□ 1.16
SPTLC2-203ENST00000554901 RTL1A6NKG5 1358 aa22.27■■□□□ 1.15
SPTLC2-203ENST00000554901 TNNT2P45379 298 aaPredicted RBP22.26■■□□□ 1.15
SPTLC2-203ENST00000554901 PRDM11Q9NQV5 511 aa22.26■■□□□ 1.15
SPTLC2-203ENST00000554901 LRP6O75581 1613 aa22.26■■□□□ 1.15
SPTLC2-203ENST00000554901 SMG6Q86US8 1419 aaKnown RBP22.26■■□□□ 1.15
SPTLC2-203ENST00000554901 MAP3K19Q56UN5 1328 aa22.26■■□□□ 1.15
SPTLC2-203ENST00000554901 CNGB1Q14028 1251 aaPredicted RBP22.26■■□□□ 1.15
SPTLC2-203ENST00000554901 POLKQ9UBT6 870 aa22.26■■□□□ 1.15
SPTLC2-203ENST00000554901 ADAMTS2O95450 1211 aa22.25■■□□□ 1.15
SPTLC2-203ENST00000554901 DIEXFQ68CQ4 756 aaKnown RBP22.25■■□□□ 1.15
SPTLC2-203ENST00000554901 RRS1Q15050 365 aaKnown RBP22.24■■□□□ 1.15
SPTLC2-203ENST00000554901 FLT4P35916 1363 aa22.23■■□□□ 1.15
SPTLC2-203ENST00000554901 COL14A1Q05707 1796 aaKnown RBP22.23■■□□□ 1.15
SPTLC2-203ENST00000554901 FAM83GA6ND36 823 aa22.22■■□□□ 1.15
SPTLC2-203ENST00000554901 FBLN1P23142 703 aa22.22■■□□□ 1.15
SPTLC2-203ENST00000554901 PPP2R1AP30153 589 aa22.22■■□□□ 1.15
SPTLC2-203ENST00000554901 IP6K1Q92551 441 aa22.22■■□□□ 1.15
SPTLC2-203ENST00000554901 MYBBP1AQ9BQG0 1328 aaKnown RBP22.22■■□□□ 1.15
SPTLC2-203ENST00000554901 LTN1O94822 1766 aa22.21■■□□□ 1.15
SPTLC2-203ENST00000554901 AMPHP49418 695 aa22.21■■□□□ 1.15
SPTLC2-203ENST00000554901 MEX3CQ5U5Q3 659 aaKnown RBP22.21■■□□□ 1.15
SPTLC2-203ENST00000554901 EMILIN1Q9Y6C2 1016 aa22.21■■□□□ 1.15
SPTLC2-203ENST00000554901 BLMP54132 1417 aaPredicted RBP22.21■■□□□ 1.15
SPTLC2-203ENST00000554901 MAP2P11137 1827 aaKnown RBP22.21■■□□□ 1.15
SPTLC2-203ENST00000554901 HOXC9P31274 260 aa22.2■■□□□ 1.14
SPTLC2-203ENST00000554901 CDK12Q9NYV4 1490 aaPredicted RBP22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 197.9 ms