RNA–Protein interactions for RNA: ENST00000554811.5

XRCC3-208, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 3,668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-208ENST00000554811 KRT24Q2M2I5 525 aa14.83□□□□□ -0.04
XRCC3-208ENST00000554811 L1TD1Q5T7N2 865 aaKnown RBP14.83□□□□□ -0.04
XRCC3-208ENST00000554811 TRIM44Q96DX7 344 aaPredicted RBP14.83□□□□□ -0.04
XRCC3-208ENST00000554811 CHMP5Q9NZZ3 219 aa14.83□□□□□ -0.04
XRCC3-208ENST00000554811 TRPM2O94759 1503 aa14.83□□□□□ -0.04
XRCC3-208ENST00000554811 ATAD2Q6PL18 1390 aa14.83□□□□□ -0.04
XRCC3-208ENST00000554811 MCM4P33991 863 aa14.82□□□□□ -0.04
XRCC3-208ENST00000554811 CHD1LQ86WJ1 897 aa14.81□□□□□ -0.04
XRCC3-208ENST00000554811 KIF16BQ96L93 1317 aa14.81□□□□□ -0.04
XRCC3-208ENST00000554811 NPC1L1Q9UHC9 1359 aa14.81□□□□□ -0.04
XRCC3-208ENST00000554811 ZNF428Q96B54 188 aa14.81□□□□□ -0.04
XRCC3-208ENST00000554811 PLXNC1O60486 1568 aa14.81□□□□□ -0.04
XRCC3-208ENST00000554811 LTV1Q96GA3 475 aaPredicted RBP14.8□□□□□ -0.04
XRCC3-208ENST00000554811 PNNQ9H307 717 aaKnown RBP14.8□□□□□ -0.04
XRCC3-208ENST00000554811 TWISTNBQ3B726 338 aaPredicted RBP14.8□□□□□ -0.04
XRCC3-208ENST00000554811 ZFYVE16Q7Z3T8 1539 aa14.8□□□□□ -0.04
XRCC3-208ENST00000554811 NPATQ14207 1427 aa14.8□□□□□ -0.04
XRCC3-208ENST00000554811 SMARCA5O60264 1052 aaPredicted RBP14.79□□□□□ -0.04
XRCC3-208ENST00000554811 NUTM2GQ5VZR2 741 aa14.79□□□□□ -0.04
XRCC3-208ENST00000554811 COG3Q96JB2 828 aa14.78□□□□□ -0.04
XRCC3-208ENST00000554811 NINLQ9Y2I6 1382 aa14.78□□□□□ -0.04
XRCC3-208ENST00000554811 RTEL1-TNFRSF6BF6WH68 1400 aa14.78□□□□□ -0.04
XRCC3-208ENST00000554811 ANKRD36BQ8N2N9 1353 aa14.78□□□□□ -0.04
XRCC3-208ENST00000554811 MCM10Q7L590 875 aa14.78□□□□□ -0.04
XRCC3-208ENST00000554811 C16orf71Q8IYS4 520 aaPredicted RBP14.77□□□□□ -0.05
XRCC3-208ENST00000554811 SPHKAPQ2M3C7 1700 aa14.77□□□□□ -0.05
XRCC3-208ENST00000554811 SULT6B1Q6IMI4 303 aa14.77□□□□□ -0.05
XRCC3-208ENST00000554811 FAM69CQ0P6D2 419 aa14.76□□□□□ -0.05
XRCC3-208ENST00000554811 TSHZ3Q63HK5 1081 aa14.75□□□□□ -0.05
XRCC3-208ENST00000554811 AEBP1Q8IUX7 1158 aa14.75□□□□□ -0.05
XRCC3-208ENST00000554811 C8orf58Q8NAV2 365 aa14.75□□□□□ -0.05
XRCC3-208ENST00000554811 ARID3AQ99856 593 aa14.75□□□□□ -0.05
XRCC3-208ENST00000554811 ABCA6Q8N139 1617 aa14.75□□□□□ -0.05
XRCC3-208ENST00000554811 MBIPQ9NS73 344 aa14.75□□□□□ -0.05
XRCC3-208ENST00000554811 GOLGA6L22H0YM25 854 aa14.74□□□□□ -0.05
XRCC3-208ENST00000554811 XRCC6P12956 609 aaKnown RBP eCLIP14.74□□□□□ -0.05
XRCC3-208ENST00000554811 ANP32BQ92688 251 aaKnown RBP14.74□□□□□ -0.05
XRCC3-208ENST00000554811 ZBTB40Q9NUA8 1239 aa14.74□□□□□ -0.05
XRCC3-208ENST00000554811 POLKQ9UBT6 870 aa14.74□□□□□ -0.05
XRCC3-208ENST00000554811 GBP4Q96PP9 640 aa14.74□□□□□ -0.05
XRCC3-208ENST00000554811 DDX49Q9Y6V7 483 aaKnown RBP14.74□□□□□ -0.05
XRCC3-208ENST00000554811 GNAI1P63096 354 aa14.73□□□□□ -0.05
XRCC3-208ENST00000554811 RPGRIP1LQ68CZ1 1315 aa14.73□□□□□ -0.05
XRCC3-208ENST00000554811 NFE2L2Q16236 605 aa14.73□□□□□ -0.05
XRCC3-208ENST00000554811 CCDC27Q2M243 656 aa14.73□□□□□ -0.05
XRCC3-208ENST00000554811 TBC1D9Q6ZT07 1266 aa14.73□□□□□ -0.05
XRCC3-208ENST00000554811 IQGAP1P46940 1657 aa14.73□□□□□ -0.05
XRCC3-208ENST00000554811 TRHP20396 242 aaPredicted RBP14.72□□□□□ -0.05
XRCC3-208ENST00000554811 RRAGDQ9NQL2 400 aaPredicted RBP14.72□□□□□ -0.05
XRCC3-208ENST00000554811 F6X3S4 739 aa14.72□□□□□ -0.05
XRCC3-208ENST00000554811 FCHSD2O94868 740 aa14.72□□□□□ -0.05
XRCC3-208ENST00000554811 TNPO1Q92973 898 aaKnown RBP14.72□□□□□ -0.05
XRCC3-208ENST00000554811 TRIM6-TRIM34B2RNG4 842 aa14.72□□□□□ -0.05
XRCC3-208ENST00000554811 SSFA2P28290 1259 aa14.72□□□□□ -0.05
XRCC3-208ENST00000554811 MCTP1Q6DN14 999 aa14.72□□□□□ -0.05
XRCC3-208ENST00000554811 OTUD7AQ8TE49 926 aaPredicted RBP14.72□□□□□ -0.05
XRCC3-208ENST00000554811 PKNOX2Q96KN3 472 aa14.72□□□□□ -0.05
XRCC3-208ENST00000554811 PLEKHF1Q96S99 279 aa14.71□□□□□ -0.05
XRCC3-208ENST00000554811 MAP3K4Q9Y6R4 1608 aa14.71□□□□□ -0.05
XRCC3-208ENST00000554811 ZNF518AQ6AHZ1 1483 aa14.71□□□□□ -0.05
XRCC3-208ENST00000554811 RTF1Q92541 710 aaKnown RBP14.71□□□□□ -0.06
XRCC3-208ENST00000554811 RILPL2Q969X0 211 aa14.71□□□□□ -0.06
XRCC3-208ENST00000554811 ANTXR1Q9H6X2 564 aa14.71□□□□□ -0.06
XRCC3-208ENST00000554811 SLC52A1Q9NWF4 448 aa14.71□□□□□ -0.06
XRCC3-208ENST00000554811 CD2BP2O95400 341 aaKnown RBP14.7□□□□□ -0.06
XRCC3-208ENST00000554811 NUCB1Q02818 461 aa14.7□□□□□ -0.06
XRCC3-208ENST00000554811 HDAC1Q13547 482 aaPredicted RBP14.7□□□□□ -0.06
XRCC3-208ENST00000554811 DDX11L8A8MPP1 907 aa14.7□□□□□ -0.06
XRCC3-208ENST00000554811 CALD1Q05682 793 aaKnown RBP14.7□□□□□ -0.06
XRCC3-208ENST00000554811 AAMPQ13685 434 aa14.7□□□□□ -0.06
XRCC3-208ENST00000554811 RNF17Q9BXT8 1623 aaKnown RBP14.7□□□□□ -0.06
XRCC3-208ENST00000554811 LAMC1P11047 1609 aa14.7□□□□□ -0.06
XRCC3-208ENST00000554811 KIF1BO60333 1816 aa14.69□□□□□ -0.06
XRCC3-208ENST00000554811 SMC5Q8IY18 1101 aa14.69□□□□□ -0.06
XRCC3-208ENST00000554811 VAMP4O75379 141 aa14.69□□□□□ -0.06
XRCC3-208ENST00000554811 LMOD2Q6P5Q4 547 aa14.69□□□□□ -0.06
XRCC3-208ENST00000554811 SLC26A8Q96RN1 970 aa14.69□□□□□ -0.06
XRCC3-208ENST00000554811 TET3O43151 1660 aa14.69□□□□□ -0.06
XRCC3-208ENST00000554811 CHAMP1Q96JM3 812 aa14.69□□□□□ -0.06
XRCC3-208ENST00000554811 SLC4A2P04920 1241 aa14.68□□□□□ -0.06
XRCC3-208ENST00000554811 CASC1Q6TDU7 716 aa14.68□□□□□ -0.06
XRCC3-208ENST00000554811 MPNDQ8N594 471 aa14.68□□□□□ -0.06
XRCC3-208ENST00000554811 NUDT16Q96DE0 195 aaKnown RBP14.68□□□□□ -0.06
XRCC3-208ENST00000554811 FAM43AQ8N2R8 423 aa14.68□□□□□ -0.06
XRCC3-208ENST00000554811 RSPH6AQ9H0K4 717 aa14.68□□□□□ -0.06
XRCC3-208ENST00000554811 DTNBO60941 627 aa14.67□□□□□ -0.06
XRCC3-208ENST00000554811 GRPEL1Q9HAV7 217 aa14.67□□□□□ -0.06
XRCC3-208ENST00000554811 EXOC6BQ9Y2D4 811 aa14.67□□□□□ -0.06
XRCC3-208ENST00000554811 CDC45O75419 566 aa14.67□□□□□ -0.06
XRCC3-208ENST00000554811 CEP152O94986 1710 aa14.67□□□□□ -0.06
XRCC3-208ENST00000554811 CT47B1P0C2W7 299 aaPredicted RBP14.67□□□□□ -0.06
XRCC3-208ENST00000554811 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.67□□□□□ -0.06
XRCC3-208ENST00000554811 GAS2L2Q8NHY3 880 aa14.67□□□□□ -0.06
XRCC3-208ENST00000554811 PHF23Q9BUL5 403 aaPredicted RBP14.67□□□□□ -0.06
XRCC3-208ENST00000554811 API5Q9BZZ5 524 aaKnown RBP14.67□□□□□ -0.06
XRCC3-208ENST00000554811 CHMP4BQ9H444 224 aaKnown RBP14.67□□□□□ -0.06
XRCC3-208ENST00000554811 MYOM1P52179 1685 aa14.66□□□□□ -0.06
XRCC3-208ENST00000554811 AMPHP49418 695 aa14.66□□□□□ -0.06
XRCC3-208ENST00000554811 PLCB2Q00722 1185 aa14.66□□□□□ -0.06
XRCC3-208ENST00000554811 CAVIN1Q6NZI2 390 aaKnown RBP14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms