RNA–Protein interactions for RNA: ENST00000554698.5

SDR39U1-208, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 1 (best) BASIC

Gene SDR39U1, Length 1,364 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-208ENST00000554698 PAK3O75914 559 aaPredicted RBP29.79■■■□□ 2.36
SDR39U1-208ENST00000554698 AKAP12Q02952 1782 aa29.79■■■□□ 2.36
SDR39U1-208ENST00000554698 COL22A1Q8NFW1 1626 aaPredicted RBP29.79■■■□□ 2.36
SDR39U1-208ENST00000554698 ANKRD36BQ8N2N9 1353 aa29.78■■■□□ 2.36
SDR39U1-208ENST00000554698 ALS2Q96Q42 1657 aa29.78■■■□□ 2.36
SDR39U1-208ENST00000554698 KIF7Q2M1P5 1343 aa29.78■■■□□ 2.36
SDR39U1-208ENST00000554698 MYOM1P52179 1685 aa29.77■■■□□ 2.36
SDR39U1-208ENST00000554698 POLR3GLQ9BT43 218 aa29.76■■■□□ 2.35
SDR39U1-208ENST00000554698 LMOD2Q6P5Q4 547 aa29.75■■■□□ 2.35
SDR39U1-208ENST00000554698 MON2Q7Z3U7 1717 aa29.75■■■□□ 2.35
SDR39U1-208ENST00000554698 NRKQ7Z2Y5 1582 aa29.74■■■□□ 2.35
SDR39U1-208ENST00000554698 TTC21BQ7Z4L5 1316 aa29.74■■■□□ 2.35
SDR39U1-208ENST00000554698 EDC4Q6P2E9 1401 aaKnown RBP29.73■■■□□ 2.35
SDR39U1-208ENST00000554698 TTC21AQ8NDW8 1320 aa29.71■■■□□ 2.35
SDR39U1-208ENST00000554698 CCDC7Q96M83 1385 aa29.71■■■□□ 2.35
SDR39U1-208ENST00000554698 LRP6O75581 1613 aa29.71■■■□□ 2.35
SDR39U1-208ENST00000554698 ABTB2Q8N961 1025 aa29.7■■■□□ 2.35
SDR39U1-208ENST00000554698 MED1Q15648 1581 aaPredicted RBP29.7■■■□□ 2.34
SDR39U1-208ENST00000554698 WASHC2AQ641Q2 1341 aa29.7■■■□□ 2.34
SDR39U1-208ENST00000554698 NUTM2BA6NNL0 878 aaPredicted RBP29.67■■■□□ 2.34
SDR39U1-208ENST00000554698 NUTM2EB1AL46 878 aaPredicted RBP29.67■■■□□ 2.34
SDR39U1-208ENST00000554698 NUTM2AQ8IVF1 878 aaPredicted RBP29.67■■■□□ 2.34
SDR39U1-208ENST00000554698 NUTM2GQ5VZR2 741 aa29.65■■■□□ 2.34
SDR39U1-208ENST00000554698 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.65■■■□□ 2.34
SDR39U1-208ENST00000554698 CABLES1Q8TDN4 633 aa29.65■■■□□ 2.34
SDR39U1-208ENST00000554698 CARD14Q9BXL6 1004 aa29.65■■■□□ 2.34
SDR39U1-208ENST00000554698 PIK3C2AO00443 1686 aa29.65■■■□□ 2.34
SDR39U1-208ENST00000554698 USP19O94966 1318 aa29.64■■■□□ 2.34
SDR39U1-208ENST00000554698 NLRP13Q86W25 1043 aa29.64■■■□□ 2.33
SDR39U1-208ENST00000554698 NLRP6P59044 892 aa29.62■■■□□ 2.33
SDR39U1-208ENST00000554698 CRYBG1Q9Y4K1 1723 aa29.61■■■□□ 2.33
SDR39U1-208ENST00000554698 NME9Q86XW9 330 aa29.61■■■□□ 2.33
SDR39U1-208ENST00000554698 PANK3Q9H999 370 aa29.61■■■□□ 2.33
SDR39U1-208ENST00000554698 USP31Q70CQ4 1352 aa29.6■■■□□ 2.33
SDR39U1-208ENST00000554698 ABCA3Q99758 1704 aa29.6■■■□□ 2.33
SDR39U1-208ENST00000554698 PLEKHG5O94827 1062 aa29.6■■■□□ 2.33
SDR39U1-208ENST00000554698 NSD3Q9BZ95 1437 aa29.59■■■□□ 2.33
SDR39U1-208ENST00000554698 ADAMTS2O95450 1211 aa29.58■■■□□ 2.33
SDR39U1-208ENST00000554698 HAP1P54257 671 aaPredicted RBP29.57■■■□□ 2.32
SDR39U1-208ENST00000554698 MEX3CQ5U5Q3 659 aaKnown RBP29.56■■■□□ 2.32
SDR39U1-208ENST00000554698 ZRANB1Q9UGI0 708 aa29.56■■■□□ 2.32
SDR39U1-208ENST00000554698 SLIT3O75094 1523 aa29.56■■■□□ 2.32
SDR39U1-208ENST00000554698 USP54Q70EL1 1684 aa29.55■■■□□ 2.32
SDR39U1-208ENST00000554698 PHRF1Q9P1Y6 1649 aaKnown RBP29.55■■■□□ 2.32
SDR39U1-208ENST00000554698 OVOS2A0A0J9YW53 1432 aa29.54■■■□□ 2.32
SDR39U1-208ENST00000554698 OVOS2Q6IE36 1432 aa29.54■■■□□ 2.32
SDR39U1-208ENST00000554698 FYB1O15117 783 aa29.53■■■□□ 2.32
SDR39U1-208ENST00000554698 GCP02774 474 aa29.53■■■□□ 2.32
SDR39U1-208ENST00000554698 MARF1Q9Y4F3 1742 aaKnown RBP29.53■■■□□ 2.32
SDR39U1-208ENST00000554698 C8orf37Q96NL8 207 aa29.51■■■□□ 2.31
SDR39U1-208ENST00000554698 CGNL1Q0VF96 1302 aa29.5■■■□□ 2.31
SDR39U1-208ENST00000554698 KCNH5Q8NCM2 988 aa29.49■■■□□ 2.31
SDR39U1-208ENST00000554698 CPDO75976 1380 aa29.48■■■□□ 2.31
SDR39U1-208ENST00000554698 COG3Q96JB2 828 aa29.48■■■□□ 2.31
SDR39U1-208ENST00000554698 GGNBP2Q9H3C7 697 aa29.48■■■□□ 2.31
SDR39U1-208ENST00000554698 NGLY1Q96IV0 654 aa29.47■■■□□ 2.31
SDR39U1-208ENST00000554698 KIAA0232Q92628 1395 aa29.47■■■□□ 2.31
SDR39U1-208ENST00000554698 FAM83GA6ND36 823 aa29.46■■■□□ 2.31
SDR39U1-208ENST00000554698 PER1O15534 1290 aaPredicted RBP29.46■■■□□ 2.31
SDR39U1-208ENST00000554698 ZC3H6P61129 1189 aaKnown RBP29.46■■■□□ 2.31
SDR39U1-208ENST00000554698 NFAT5O94916 1531 aa29.45■■■□□ 2.31
SDR39U1-208ENST00000554698 FNBP4Q8N3X1 1017 aaPredicted RBP29.45■■■□□ 2.31
SDR39U1-208ENST00000554698 PRDM11Q9NQV5 511 aa29.44■■■□□ 2.3
SDR39U1-208ENST00000554698 KNSTRNQ9Y448 316 aa29.44■■■□□ 2.3
SDR39U1-208ENST00000554698 AFF2P51816 1311 aa29.44■■■□□ 2.3
SDR39U1-208ENST00000554698 PHF23Q9BUL5 403 aaPredicted RBP29.43■■■□□ 2.3
SDR39U1-208ENST00000554698 KIF20BQ96Q89 1820 aa29.43■■■□□ 2.3
SDR39U1-208ENST00000554698 RGS17Q9UGC6 210 aaPredicted RBP29.42■■■□□ 2.3
SDR39U1-208ENST00000554698 SLIT2O94813 1529 aa29.42■■■□□ 2.3
SDR39U1-208ENST00000554698 NSD2O96028 1365 aa29.41■■■□□ 2.3
SDR39U1-208ENST00000554698 SOX12O15370 315 aa29.4■■■□□ 2.3
SDR39U1-208ENST00000554698 AMER1Q5JTC6 1135 aaPredicted RBP29.39■■■□□ 2.3
SDR39U1-208ENST00000554698 ARHGEF25Q86VW2 580 aa29.39■■■□□ 2.3
SDR39U1-208ENST00000554698 COL14A1Q05707 1796 aaKnown RBP29.39■■■□□ 2.3
SDR39U1-208ENST00000554698 CHRNA2Q15822 529 aa29.39■■■□□ 2.29
SDR39U1-208ENST00000554698 BCL9LQ86UU0 1499 aa29.38■■■□□ 2.29
SDR39U1-208ENST00000554698 ZNF772Q68DY9 489 aaPredicted RBP29.38■■■□□ 2.29
SDR39U1-208ENST00000554698 AATKQ6ZMQ8 1374 aa29.36■■■□□ 2.29
SDR39U1-208ENST00000554698 USP21Q9UK80 565 aa29.36■■■□□ 2.29
SDR39U1-208ENST00000554698 PLCH1Q4KWH8 1693 aa29.35■■■□□ 2.29
SDR39U1-208ENST00000554698 ZNF316A6NFI3 1004 aaPredicted RBP29.35■■■□□ 2.29
SDR39U1-208ENST00000554698 BTG4Q9NY30 223 aa29.34■■■□□ 2.29
SDR39U1-208ENST00000554698 NPC1L1Q9UHC9 1359 aa29.34■■■□□ 2.29
SDR39U1-208ENST00000554698 UNC5CLQ8IV45 518 aa29.33■■■□□ 2.29
SDR39U1-208ENST00000554698 LMO7Q8WWI1 1683 aa29.33■■■□□ 2.29
SDR39U1-208ENST00000554698 NWD2Q9ULI1 1742 aa29.33■■■□□ 2.29
SDR39U1-208ENST00000554698 ANKRD26Q9UPS8 1709 aa29.31■■■□□ 2.28
SDR39U1-208ENST00000554698 CAMTA1Q9Y6Y1 1673 aa29.31■■■□□ 2.28
SDR39U1-208ENST00000554698 ABCC6O95255 1503 aa29.3■■■□□ 2.28
SDR39U1-208ENST00000554698 ZBTB7CA1YPR0 619 aa29.3■■■□□ 2.28
SDR39U1-208ENST00000554698 FBLN1P23142 703 aa29.3■■■□□ 2.28
SDR39U1-208ENST00000554698 MAP3K19Q56UN5 1328 aa29.29■■■□□ 2.28
SDR39U1-208ENST00000554698 COL18A1P39060 1754 aa29.29■■■□□ 2.28
SDR39U1-208ENST00000554698 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.29■■■□□ 2.28
SDR39U1-208ENST00000554698 DDX10Q13206 875 aaKnown RBP29.28■■■□□ 2.28
SDR39U1-208ENST00000554698 POTEAQ6S8J7 498 aa29.28■■■□□ 2.28
SDR39U1-208ENST00000554698 ATRNO75882 1429 aa29.28■■■□□ 2.28
SDR39U1-208ENST00000554698 TRPC5Q9UL62 973 aaPredicted RBP29.27■■■□□ 2.28
SDR39U1-208ENST00000554698 AXIN2Q9Y2T1 843 aa29.27■■■□□ 2.28
SDR39U1-208ENST00000554698 NRAPQ86VF7 1730 aa29.27■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms