RNA–Protein interactions for RNA: ENST00000554677.1

MTHFD1-207, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 3

Gene MTHFD1, Length 783 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-207ENST00000554677 ITSN1Q15811 1721 aa17.82■□□□□ 0.44
MTHFD1-207ENST00000554677 CDK19Q9BWU1 502 aa17.82■□□□□ 0.44
MTHFD1-207ENST00000554677 BTG4Q9NY30 223 aa17.82■□□□□ 0.44
MTHFD1-207ENST00000554677 COL14A1Q05707 1796 aaKnown RBP17.81■□□□□ 0.44
MTHFD1-207ENST00000554677 CCDC9Q9Y3X0 531 aaKnown RBP17.81■□□□□ 0.44
MTHFD1-207ENST00000554677 BLMP54132 1417 aaPredicted RBP17.81■□□□□ 0.44
MTHFD1-207ENST00000554677 PAK3O75914 559 aaPredicted RBP17.8■□□□□ 0.44
MTHFD1-207ENST00000554677 ZRANB1Q9UGI0 708 aa17.8■□□□□ 0.44
MTHFD1-207ENST00000554677 KRT27Q7Z3Y8 459 aa17.79■□□□□ 0.44
MTHFD1-207ENST00000554677 DEFB132Q7Z7B7 95 aa17.79■□□□□ 0.44
MTHFD1-207ENST00000554677 TOPAZ1Q8N9V7 1692 aa17.78■□□□□ 0.44
MTHFD1-207ENST00000554677 PLEKHG3A1L390 1219 aa17.77■□□□□ 0.44
MTHFD1-207ENST00000554677 FAM98CQ17RN3 349 aaKnown RBP17.77■□□□□ 0.44
MTHFD1-207ENST00000554677 NBPF8Q3BBV2 869 aa17.77■□□□□ 0.44
MTHFD1-207ENST00000554677 CCDC61Q9Y6R9 512 aa17.77■□□□□ 0.44
MTHFD1-207ENST00000554677 POLR3AO14802 1390 aaPredicted RBP17.77■□□□□ 0.43
MTHFD1-207ENST00000554677 ACEP12821 1306 aa17.76■□□□□ 0.43
MTHFD1-207ENST00000554677 SPATA31A5Q5VU36 1347 aa17.76■□□□□ 0.43
MTHFD1-207ENST00000554677 SPATA31A7Q8IWB4 1347 aa17.76■□□□□ 0.43
MTHFD1-207ENST00000554677 PHRF1Q9P1Y6 1649 aaKnown RBP17.74■□□□□ 0.43
MTHFD1-207ENST00000554677 NUTM2GQ5VZR2 741 aa17.74■□□□□ 0.43
MTHFD1-207ENST00000554677 PRDM11Q9NQV5 511 aa17.74■□□□□ 0.43
MTHFD1-207ENST00000554677 KIAA0232Q92628 1395 aa17.74■□□□□ 0.43
MTHFD1-207ENST00000554677 CHRNA2Q15822 529 aa17.73■□□□□ 0.43
MTHFD1-207ENST00000554677 THSD7AQ9UPZ6 1657 aa17.71■□□□□ 0.43
MTHFD1-207ENST00000554677 ZC3H6P61129 1189 aaKnown RBP17.71■□□□□ 0.43
MTHFD1-207ENST00000554677 L3MBTL2Q969R5 705 aa17.71■□□□□ 0.43
MTHFD1-207ENST00000554677 A0A0G2JS52 829 aa17.7■□□□□ 0.42
MTHFD1-207ENST00000554677 MYT1Q01538 1121 aa17.7■□□□□ 0.42
MTHFD1-207ENST00000554677 SF3B2Q13435 895 aaKnown RBP17.7■□□□□ 0.42
MTHFD1-207ENST00000554677 FAM182BQ5T319 152 aa17.7■□□□□ 0.42
MTHFD1-207ENST00000554677 SPATA31A1Q5TZJ5 1347 aa17.7■□□□□ 0.42
MTHFD1-207ENST00000554677 CENPJQ9HC77 1338 aaPredicted RBP17.7■□□□□ 0.42
MTHFD1-207ENST00000554677 CABP2Q9NPB3 220 aa17.69■□□□□ 0.42
MTHFD1-207ENST00000554677 ABTB2Q8N961 1025 aa17.68■□□□□ 0.42
MTHFD1-207ENST00000554677 SIN3AQ96ST3 1273 aa17.68■□□□□ 0.42
MTHFD1-207ENST00000554677 STRN4Q9NRL3 753 aa17.67■□□□□ 0.42
MTHFD1-207ENST00000554677 QRICH2Q9H0J4 1663 aa17.67■□□□□ 0.42
MTHFD1-207ENST00000554677 CAMTA1Q9Y6Y1 1673 aa17.67■□□□□ 0.42
MTHFD1-207ENST00000554677 USP19O94966 1318 aa17.67■□□□□ 0.42
MTHFD1-207ENST00000554677 PPIP5K1Q6PFW1 1433 aa17.66■□□□□ 0.42
MTHFD1-207ENST00000554677 SRPK2P78362 688 aaKnown RBP17.66■□□□□ 0.42
MTHFD1-207ENST00000554677 NRKQ7Z2Y5 1582 aa17.66■□□□□ 0.42
MTHFD1-207ENST00000554677 CPDO75976 1380 aa17.65■□□□□ 0.42
MTHFD1-207ENST00000554677 LMO7Q8WWI1 1683 aa17.64■□□□□ 0.42
MTHFD1-207ENST00000554677 RGPD1P0DJD0 1748 aa17.64■□□□□ 0.41
MTHFD1-207ENST00000554677 BAG6P46379 1132 aa17.64■□□□□ 0.41
MTHFD1-207ENST00000554677 CABP1Q9NZU7 370 aa17.64■□□□□ 0.41
MTHFD1-207ENST00000554677 TRPM1Q7Z4N2 1603 aa17.63■□□□□ 0.41
MTHFD1-207ENST00000554677 GCP02774 474 aa17.63■□□□□ 0.41
MTHFD1-207ENST00000554677 EN1Q05925 392 aaPredicted RBP17.63■□□□□ 0.41
MTHFD1-207ENST00000554677 NLRP13Q86W25 1043 aa17.63■□□□□ 0.41
MTHFD1-207ENST00000554677 TNS1Q9HBL0 1735 aaKnown RBP17.63■□□□□ 0.41
MTHFD1-207ENST00000554677 SSH2Q76I76 1423 aa17.63■□□□□ 0.41
MTHFD1-207ENST00000554677 LARP1Q6PKG0 1096 aaKnown RBP17.62■□□□□ 0.41
MTHFD1-207ENST00000554677 BARGINQ6ZT62 677 aa17.62■□□□□ 0.41
MTHFD1-207ENST00000554677 EVA1CP58658 441 aa17.61■□□□□ 0.41
MTHFD1-207ENST00000554677 USP35Q9P2H5 1018 aa17.61■□□□□ 0.41
MTHFD1-207ENST00000554677 BRD4O60885 1362 aaPredicted RBP17.61■□□□□ 0.41
MTHFD1-207ENST00000554677 DISP2A7MBM2 1401 aa17.6■□□□□ 0.41
MTHFD1-207ENST00000554677 USP6P35125 1406 aa17.6■□□□□ 0.41
MTHFD1-207ENST00000554677 PSDA5PKW4 1024 aaPredicted RBP17.59■□□□□ 0.41
MTHFD1-207ENST00000554677 NEUROD1Q13562 356 aa17.59■□□□□ 0.41
MTHFD1-207ENST00000554677 FAM196AQ6ZSG2 479 aa17.59■□□□□ 0.41
MTHFD1-207ENST00000554677 TRIM37O94972 964 aa17.58■□□□□ 0.4
MTHFD1-207ENST00000554677 TCP11L2Q8N4U5 519 aa17.58■□□□□ 0.4
MTHFD1-207ENST00000554677 COL18A1P39060 1754 aa17.58■□□□□ 0.4
MTHFD1-207ENST00000554677 EVC2Q86UK5 1308 aa17.57■□□□□ 0.4
MTHFD1-207ENST00000554677 NLRP6P59044 892 aa17.57■□□□□ 0.4
MTHFD1-207ENST00000554677 EZH2Q15910 746 aaKnown RBP17.57■□□□□ 0.4
MTHFD1-207ENST00000554677 CAMKK2Q96RR4 588 aa17.57■□□□□ 0.4
MTHFD1-207ENST00000554677 PIK3C2AO00443 1686 aa17.56■□□□□ 0.4
MTHFD1-207ENST00000554677 LRP5O75197 1615 aa17.56■□□□□ 0.4
MTHFD1-207ENST00000554677 SLIT3O75094 1523 aa17.56■□□□□ 0.4
MTHFD1-207ENST00000554677 COL5A2P05997 1499 aaPredicted RBP17.56■□□□□ 0.4
MTHFD1-207ENST00000554677 THRAP3Q9Y2W1 955 aaKnown RBP17.55■□□□□ 0.4
MTHFD1-207ENST00000554677 AKAP12Q02952 1782 aa17.55■□□□□ 0.4
MTHFD1-207ENST00000554677 ROCK2O75116 1388 aaKnown RBP17.54■□□□□ 0.4
MTHFD1-207ENST00000554677 RGPD5Q99666 1765 aa17.54■□□□□ 0.4
MTHFD1-207ENST00000554677 PDE3BQ13370 1112 aa17.54■□□□□ 0.4
MTHFD1-207ENST00000554677 AATKQ6ZMQ8 1374 aa17.53■□□□□ 0.4
MTHFD1-207ENST00000554677 PARP4Q9UKK3 1724 aaKnown RBP17.53■□□□□ 0.4
MTHFD1-207ENST00000554677 AXIN2Q9Y2T1 843 aa17.53■□□□□ 0.4
MTHFD1-207ENST00000554677 TTC21BQ7Z4L5 1316 aa17.52■□□□□ 0.4
MTHFD1-207ENST00000554677 APBA3O96018 575 aa17.52■□□□□ 0.4
MTHFD1-207ENST00000554677 ZNF692Q9BU19 519 aaPredicted RBP17.52■□□□□ 0.4
MTHFD1-207ENST00000554677 CRB1P82279 1406 aa17.51■□□□□ 0.39
MTHFD1-207ENST00000554677 CPSF1Q10570 1443 aaKnown RBP17.51■□□□□ 0.39
MTHFD1-207ENST00000554677 R3HDM1Q15032 1099 aaKnown RBP17.51■□□□□ 0.39
MTHFD1-207ENST00000554677 SBF2Q86WG5 1849 aa17.5■□□□□ 0.39
MTHFD1-207ENST00000554677 ZBTB7CA1YPR0 619 aa17.5■□□□□ 0.39
MTHFD1-207ENST00000554677 ARHGEF25Q86VW2 580 aa17.5■□□□□ 0.39
MTHFD1-207ENST00000554677 PEAK1Q9H792 1746 aa17.49■□□□□ 0.39
MTHFD1-207ENST00000554677 RREB1Q92766 1687 aa17.48■□□□□ 0.39
MTHFD1-207ENST00000554677 NUP188Q5SRE5 1749 aa17.47■□□□□ 0.39
MTHFD1-207ENST00000554677 TTC21AQ8NDW8 1320 aa17.47■□□□□ 0.39
MTHFD1-207ENST00000554677 PARD3Q8TEW0 1356 aa17.46■□□□□ 0.39
MTHFD1-207ENST00000554677 SBNO2Q9Y2G9 1366 aa17.46■□□□□ 0.39
MTHFD1-207ENST00000554677 MON2Q7Z3U7 1717 aa17.46■□□□□ 0.39
MTHFD1-207ENST00000554677 WDR17Q8IZU2 1322 aa17.46■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms