RNA–Protein interactions for RNA: ENST00000554417.1

HNRNPC-210, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 691 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-210ENST00000554417 KIAA1210Q9ULL0 1709 aa10.34□□□□□ -0.75
HNRNPC-210ENST00000554417 HOXB1P14653 301 aaPredicted RBP10.34□□□□□ -0.75
HNRNPC-210ENST00000554417 PROSER2Q86WR7 435 aaPredicted RBP10.34□□□□□ -0.75
HNRNPC-210ENST00000554417 EIF3AQ14152 1382 aaKnown RBP10.34□□□□□ -0.75
HNRNPC-210ENST00000554417 IQSEC2Q5JU85 1478 aa10.34□□□□□ -0.75
HNRNPC-210ENST00000554417 RNF166Q96A37 237 aaPredicted RBP10.33□□□□□ -0.76
HNRNPC-210ENST00000554417 ROCK2O75116 1388 aaKnown RBP10.33□□□□□ -0.76
HNRNPC-210ENST00000554417 METP08581 1390 aa10.33□□□□□ -0.76
HNRNPC-210ENST00000554417 TECPR2O15040 1411 aa10.33□□□□□ -0.76
HNRNPC-210ENST00000554417 PTCH1Q13635 1447 aa10.33□□□□□ -0.76
HNRNPC-210ENST00000554417 FAM135BQ49AJ0 1406 aa10.33□□□□□ -0.76
HNRNPC-210ENST00000554417 YTHDC2Q9H6S0 1430 aaKnown RBP10.33□□□□□ -0.76
HNRNPC-210ENST00000554417 GPRASP1Q5JY77 1395 aa10.32□□□□□ -0.76
HNRNPC-210ENST00000554417 CARD11Q9BXL7 1154 aa10.32□□□□□ -0.76
HNRNPC-210ENST00000554417 ZNF335Q9H4Z2 1342 aaPredicted RBP10.32□□□□□ -0.76
HNRNPC-210ENST00000554417 NWD1Q149M9 1564 aa10.31□□□□□ -0.76
HNRNPC-210ENST00000554417 CHRM1P11229 460 aaPredicted RBP10.31□□□□□ -0.76
HNRNPC-210ENST00000554417 C19orf44Q9H6X5 657 aa10.31□□□□□ -0.76
HNRNPC-210ENST00000554417 POGKQ9P215 609 aa10.31□□□□□ -0.76
HNRNPC-210ENST00000554417 NRXN3Q9Y4C0 1643 aa10.31□□□□□ -0.76
HNRNPC-210ENST00000554417 DLC1Q96QB1 1528 aa10.3□□□□□ -0.76
HNRNPC-210ENST00000554417 PSEN1P49768 467 aa10.3□□□□□ -0.76
HNRNPC-210ENST00000554417 TMEM132EQ6IEE7 984 aa10.3□□□□□ -0.76
HNRNPC-210ENST00000554417 C14orf37Q86TY3 774 aa10.3□□□□□ -0.76
HNRNPC-210ENST00000554417 RALGAPBQ86X10 1494 aa10.3□□□□□ -0.76
HNRNPC-210ENST00000554417 MSH6P52701 1360 aa10.29□□□□□ -0.76
HNRNPC-210ENST00000554417 CHD2O14647 1828 aaKnown RBP10.29□□□□□ -0.76
HNRNPC-210ENST00000554417 TOM1O60784 492 aa10.29□□□□□ -0.76
HNRNPC-210ENST00000554417 NBPF8Q3BBV2 869 aa10.29□□□□□ -0.76
HNRNPC-210ENST00000554417 DPY19L2Q6NUT2 758 aa10.29□□□□□ -0.76
HNRNPC-210ENST00000554417 CADPS2Q86UW7 1296 aa10.29□□□□□ -0.76
HNRNPC-210ENST00000554417 CERKQ8TCT0 537 aa10.29□□□□□ -0.76
HNRNPC-210ENST00000554417 STK26Q9P289 416 aa10.29□□□□□ -0.76
HNRNPC-210ENST00000554417 ADGRB1O14514 1584 aa10.28□□□□□ -0.76
HNRNPC-210ENST00000554417 ATF3P18847 181 aa10.28□□□□□ -0.76
HNRNPC-210ENST00000554417 GSE1Q14687 1217 aa10.28□□□□□ -0.76
HNRNPC-210ENST00000554417 TRAK1Q9UPV9 953 aa10.28□□□□□ -0.76
HNRNPC-210ENST00000554417 TMEM94Q12767 1356 aa10.27□□□□□ -0.76
HNRNPC-210ENST00000554417 DCCP43146 1447 aa10.27□□□□□ -0.77
HNRNPC-210ENST00000554417 PTPRUQ92729 1446 aa10.27□□□□□ -0.77
HNRNPC-210ENST00000554417 LTBP4Q8N2S1 1624 aa10.27□□□□□ -0.77
HNRNPC-210ENST00000554417 NBPF1Q3BBV0 1214 aa10.27□□□□□ -0.77
HNRNPC-210ENST00000554417 CDCA8Q53HL2 280 aa10.27□□□□□ -0.77
HNRNPC-210ENST00000554417 BOLA1Q9Y3E2 137 aa10.27□□□□□ -0.77
HNRNPC-210ENST00000554417 ERBB3P21860 1342 aa10.27□□□□□ -0.77
HNRNPC-210ENST00000554417 PRAM1Q96QH2 718 aa10.26□□□□□ -0.77
HNRNPC-210ENST00000554417 SETD1AO15047 1707 aaKnown RBP10.26□□□□□ -0.77
HNRNPC-210ENST00000554417 XRN1Q8IZH2 1706 aaKnown RBP10.26□□□□□ -0.77
HNRNPC-210ENST00000554417 LRRC7Q96NW7 1537 aa10.26□□□□□ -0.77
HNRNPC-210ENST00000554417 CENPJQ9HC77 1338 aaPredicted RBP10.26□□□□□ -0.77
HNRNPC-210ENST00000554417 TRPM1Q7Z4N2 1603 aa10.25□□□□□ -0.77
HNRNPC-210ENST00000554417 KNDC1Q76NI1 1749 aa10.25□□□□□ -0.77
HNRNPC-210ENST00000554417 EIF4G2P78344 907 aaKnown RBP eCLIP10.25□□□□□ -0.77
HNRNPC-210ENST00000554417 DOK7Q18PE1 504 aa10.25□□□□□ -0.77
HNRNPC-210ENST00000554417 ZNF710Q8N1W2 664 aa10.25□□□□□ -0.77
HNRNPC-210ENST00000554417 PUS7Q96PZ0 661 aaKnown RBP10.25□□□□□ -0.77
HNRNPC-210ENST00000554417 ROBO2Q9HCK4 1378 aa10.25□□□□□ -0.77
HNRNPC-210ENST00000554417 SBNO2Q9Y2G9 1366 aa10.25□□□□□ -0.77
HNRNPC-210ENST00000554417 ADGRL3Q9HAR2 1447 aa10.24□□□□□ -0.77
HNRNPC-210ENST00000554417 EVC2Q86UK5 1308 aa10.23□□□□□ -0.77
HNRNPC-210ENST00000554417 ASXL1Q8IXJ9 1541 aa10.23□□□□□ -0.77
HNRNPC-210ENST00000554417 WAPLQ7Z5K2 1190 aa10.22□□□□□ -0.77
HNRNPC-210ENST00000554417 WASLO00401 505 aaPredicted RBP10.21□□□□□ -0.77
HNRNPC-210ENST00000554417 TMF1P82094 1093 aa10.21□□□□□ -0.77
HNRNPC-210ENST00000554417 PDAP1Q13442 181 aaKnown RBP10.21□□□□□ -0.77
HNRNPC-210ENST00000554417 SLAIN2Q9P270 581 aa10.21□□□□□ -0.77
HNRNPC-210ENST00000554417 USP47Q96K76 1375 aa10.21□□□□□ -0.78
HNRNPC-210ENST00000554417 G3V3G9 751 aa10.2□□□□□ -0.78
HNRNPC-210ENST00000554417 VARS2Q5ST30 1063 aaKnown RBP10.2□□□□□ -0.78
HNRNPC-210ENST00000554417 ANKARQ7Z5J8 1434 aa10.19□□□□□ -0.78
HNRNPC-210ENST00000554417 ST20-MTHFSA0A0A6YYL1 179 aa10.19□□□□□ -0.78
HNRNPC-210ENST00000554417 UBAP1LF5GYI3 381 aa10.19□□□□□ -0.78
HNRNPC-210ENST00000554417 CDC42BPGQ6DT37 1551 aa10.18□□□□□ -0.78
HNRNPC-210ENST00000554417 ATAD2Q6PL18 1390 aa10.18□□□□□ -0.78
HNRNPC-210ENST00000554417 SRPK2P78362 688 aaKnown RBP10.18□□□□□ -0.78
HNRNPC-210ENST00000554417 FBXO41Q8TF61 875 aa10.18□□□□□ -0.78
HNRNPC-210ENST00000554417 STRCP1A6NGW2 1772 aa10.18□□□□□ -0.78
HNRNPC-210ENST00000554417 ADGRB2O60241 1585 aa10.18□□□□□ -0.78
HNRNPC-210ENST00000554417 PLEKHH1Q9ULM0 1364 aa10.17□□□□□ -0.78
HNRNPC-210ENST00000554417 NINLQ9Y2I6 1382 aa10.17□□□□□ -0.78
HNRNPC-210ENST00000554417 MINK1Q8N4C8 1332 aaPredicted RBP10.17□□□□□ -0.78
HNRNPC-210ENST00000554417 PTGER2P43116 358 aa10.17□□□□□ -0.78
HNRNPC-210ENST00000554417 SAFB2Q14151 953 aaKnown RBP eCLIP10.17□□□□□ -0.78
HNRNPC-210ENST00000554417 FKBP8Q14318 412 aa10.17□□□□□ -0.78
HNRNPC-210ENST00000554417 CDK19Q9BWU1 502 aa10.17□□□□□ -0.78
HNRNPC-210ENST00000554417 ARHGEF28Q8N1W1 1705 aaKnown RBP10.16□□□□□ -0.78
HNRNPC-210ENST00000554417 ZNF687Q8N1G0 1237 aa10.16□□□□□ -0.78
HNRNPC-210ENST00000554417 CABP2Q9NPB3 220 aa10.16□□□□□ -0.78
HNRNPC-210ENST00000554417 FBXO3Q9UK99 471 aa10.16□□□□□ -0.78
HNRNPC-210ENST00000554417 BRD4O60885 1362 aaPredicted RBP10.15□□□□□ -0.78
HNRNPC-210ENST00000554417 RIMBP2O15034 1052 aa10.15□□□□□ -0.78
HNRNPC-210ENST00000554417 PSME1Q06323 249 aa10.15□□□□□ -0.78
HNRNPC-210ENST00000554417 ESCO1Q5FWF5 840 aa10.15□□□□□ -0.78
HNRNPC-210ENST00000554417 NUDT16Q96DE0 195 aaKnown RBP10.15□□□□□ -0.78
HNRNPC-210ENST00000554417 RBM33Q96EV2 1170 aaKnown RBP10.15□□□□□ -0.78
HNRNPC-210ENST00000554417 TESK2Q96S53 571 aa10.15□□□□□ -0.78
HNRNPC-210ENST00000554417 NPHP3Q7Z494 1330 aa10.14□□□□□ -0.79
HNRNPC-210ENST00000554417 TULP4Q9NRJ4 1543 aa10.14□□□□□ -0.79
HNRNPC-210ENST00000554417 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.14□□□□□ -0.79
HNRNPC-210ENST00000554417 PLEKHG3A1L390 1219 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms