RNA–Protein interactions for RNA: ENST00000553942.5

MARK3-207, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best) BASIC

Gene MARK3, Length 2,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-207ENST00000553942 UBE2Q2Q8WVN8 375 aa12.34□□□□□ -0.43
MARK3-207ENST00000553942 CPSF1Q10570 1443 aaKnown RBP12.33□□□□□ -0.44
MARK3-207ENST00000553942 PPP2R1AP30153 589 aa12.33□□□□□ -0.44
MARK3-207ENST00000553942 DMRT2Q9Y5R5 561 aa12.33□□□□□ -0.44
MARK3-207ENST00000553942 PLEKHG3A1L390 1219 aa12.32□□□□□ -0.44
MARK3-207ENST00000553942 RRS1Q15050 365 aaKnown RBP12.32□□□□□ -0.44
MARK3-207ENST00000553942 CGNL1Q0VF96 1302 aa12.32□□□□□ -0.44
MARK3-207ENST00000553942 PARD3Q8TEW0 1356 aa12.32□□□□□ -0.44
MARK3-207ENST00000553942 FMN2Q9NZ56 1722 aa12.32□□□□□ -0.44
MARK3-207ENST00000553942 PSME1Q06323 249 aa12.32□□□□□ -0.44
MARK3-207ENST00000553942 ANO8Q9HCE9 1232 aaPredicted RBP12.32□□□□□ -0.44
MARK3-207ENST00000553942 MSH5O43196 834 aa12.31□□□□□ -0.44
MARK3-207ENST00000553942 PUS7Q96PZ0 661 aaKnown RBP12.31□□□□□ -0.44
MARK3-207ENST00000553942 TTC21BQ7Z4L5 1316 aa12.31□□□□□ -0.44
MARK3-207ENST00000553942 MSH6P52701 1360 aa12.31□□□□□ -0.44
MARK3-207ENST00000553942 ZBTB7CA1YPR0 619 aa12.31□□□□□ -0.44
MARK3-207ENST00000553942 PIP4K2BP78356 416 aa12.31□□□□□ -0.44
MARK3-207ENST00000553942 SALL2Q9Y467 1007 aaPredicted RBP12.31□□□□□ -0.44
MARK3-207ENST00000553942 MST1RQ04912 1400 aa12.31□□□□□ -0.44
MARK3-207ENST00000553942 C1orf167Q5SNV9 1468 aa12.31□□□□□ -0.44
MARK3-207ENST00000553942 SLAIN2Q9P270 581 aa12.3□□□□□ -0.44
MARK3-207ENST00000553942 MYBBP1AQ9BQG0 1328 aaKnown RBP12.3□□□□□ -0.44
MARK3-207ENST00000553942 CDC42BPGQ6DT37 1551 aa12.3□□□□□ -0.44
MARK3-207ENST00000553942 CABLES1Q8TDN4 633 aa12.3□□□□□ -0.44
MARK3-207ENST00000553942 EMILIN1Q9Y6C2 1016 aa12.3□□□□□ -0.44
MARK3-207ENST00000553942 USP6P35125 1406 aa12.3□□□□□ -0.44
MARK3-207ENST00000553942 MTHFSP49914 203 aa12.29□□□□□ -0.44
MARK3-207ENST00000553942 BRINP3Q76B58 766 aa12.29□□□□□ -0.44
MARK3-207ENST00000553942 ABTB2Q8N961 1025 aa12.29□□□□□ -0.44
MARK3-207ENST00000553942 TOPAZ1Q8N9V7 1692 aa12.29□□□□□ -0.44
MARK3-207ENST00000553942 NLRP6P59044 892 aa12.28□□□□□ -0.44
MARK3-207ENST00000553942 RALBP1Q15311 655 aa12.28□□□□□ -0.44
MARK3-207ENST00000553942 CADPS2Q86UW7 1296 aa12.28□□□□□ -0.44
MARK3-207ENST00000553942 KRT28Q7Z3Y7 464 aa12.27□□□□□ -0.44
MARK3-207ENST00000553942 DEKP35659 375 aaKnown RBP12.27□□□□□ -0.45
MARK3-207ENST00000553942 POLR3AO14802 1390 aaPredicted RBP12.26□□□□□ -0.45
MARK3-207ENST00000553942 LTBP4Q8N2S1 1624 aa12.26□□□□□ -0.45
MARK3-207ENST00000553942 CCER2I3L3R5 266 aa12.26□□□□□ -0.45
MARK3-207ENST00000553942 ZNF692Q9BU19 519 aaPredicted RBP12.26□□□□□ -0.45
MARK3-207ENST00000553942 EDC4Q6P2E9 1401 aaKnown RBP12.26□□□□□ -0.45
MARK3-207ENST00000553942 NINLQ9Y2I6 1382 aa12.26□□□□□ -0.45
MARK3-207ENST00000553942 ITSN1Q15811 1721 aa12.26□□□□□ -0.45
MARK3-207ENST00000553942 NLRP13Q86W25 1043 aa12.26□□□□□ -0.45
MARK3-207ENST00000553942 COG3Q96JB2 828 aa12.25□□□□□ -0.45
MARK3-207ENST00000553942 ANKARQ7Z5J8 1434 aa12.25□□□□□ -0.45
MARK3-207ENST00000553942 AKAP12Q02952 1782 aa12.25□□□□□ -0.45
MARK3-207ENST00000553942 CCDC146Q8IYE0 955 aa12.25□□□□□ -0.45
MARK3-207ENST00000553942 PNISRQ8TF01 805 aaKnown RBP12.25□□□□□ -0.45
MARK3-207ENST00000553942 SSH2Q76I76 1423 aa12.24□□□□□ -0.45
MARK3-207ENST00000553942 POLKQ9UBT6 870 aa12.24□□□□□ -0.45
MARK3-207ENST00000553942 MON2Q7Z3U7 1717 aa12.24□□□□□ -0.45
MARK3-207ENST00000553942 ADAMTS8Q9UP79 889 aa12.23□□□□□ -0.45
MARK3-207ENST00000553942 HNRNPUQ00839 825 aaKnown RBP eCLIP12.22□□□□□ -0.45
MARK3-207ENST00000553942 NRKQ7Z2Y5 1582 aa12.22□□□□□ -0.45
MARK3-207ENST00000553942 ZC3H6P61129 1189 aaKnown RBP12.22□□□□□ -0.45
MARK3-207ENST00000553942 PIK3C2AO00443 1686 aa12.21□□□□□ -0.45
MARK3-207ENST00000553942 UBAP1LF5GYI3 381 aa12.21□□□□□ -0.45
MARK3-207ENST00000553942 HSP90AB2PQ58FF8 381 aa12.21□□□□□ -0.45
MARK3-207ENST00000553942 LTV1Q96GA3 475 aaPredicted RBP12.21□□□□□ -0.45
MARK3-207ENST00000553942 KIF20BQ96Q89 1820 aa12.21□□□□□ -0.46
MARK3-207ENST00000553942 U2SURPO15042 1029 aaKnown RBP12.21□□□□□ -0.46
MARK3-207ENST00000553942 NPC1L1Q9UHC9 1359 aa12.2□□□□□ -0.46
MARK3-207ENST00000553942 FKBP8Q14318 412 aa12.2□□□□□ -0.46
MARK3-207ENST00000553942 BRD4O60885 1362 aaPredicted RBP12.19□□□□□ -0.46
MARK3-207ENST00000553942 MAP3K19Q56UN5 1328 aa12.19□□□□□ -0.46
MARK3-207ENST00000553942 OVOS2A0A0J9YW53 1432 aa12.19□□□□□ -0.46
MARK3-207ENST00000553942 OVOS2Q6IE36 1432 aa12.19□□□□□ -0.46
MARK3-207ENST00000553942 HMOX1P09601 288 aa12.18□□□□□ -0.46
MARK3-207ENST00000553942 CHRNA2Q15822 529 aa12.18□□□□□ -0.46
MARK3-207ENST00000553942 DCCP43146 1447 aa12.18□□□□□ -0.46
MARK3-207ENST00000553942 NEFLP07196 543 aa12.18□□□□□ -0.46
MARK3-207ENST00000553942 MAP2P11137 1827 aaKnown RBP12.17□□□□□ -0.46
MARK3-207ENST00000553942 NEUROD2Q15784 382 aa12.17□□□□□ -0.46
MARK3-207ENST00000553942 RRP7AQ9Y3A4 280 aaKnown RBP12.17□□□□□ -0.46
MARK3-207ENST00000553942 NCOA3Q9Y6Q9 1424 aa12.17□□□□□ -0.46
MARK3-207ENST00000553942 NPHP3Q7Z494 1330 aa12.17□□□□□ -0.46
MARK3-207ENST00000553942 TTC21AQ8NDW8 1320 aa12.17□□□□□ -0.46
MARK3-207ENST00000553942 GCP02774 474 aa12.16□□□□□ -0.46
MARK3-207ENST00000553942 U2AF1L5P0DN76 240 aaPredicted RBP12.16□□□□□ -0.46
MARK3-207ENST00000553942 U2AF1Q01081 240 aaKnown RBP eCLIP12.16□□□□□ -0.46
MARK3-207ENST00000553942 USHBP1Q8N6Y0 703 aa12.16□□□□□ -0.46
MARK3-207ENST00000553942 NSD2O96028 1365 aa12.16□□□□□ -0.46
MARK3-207ENST00000553942 WDR43Q15061 677 aaKnown RBP eCLIP12.16□□□□□ -0.46
MARK3-207ENST00000553942 AXIN2Q9Y2T1 843 aa12.16□□□□□ -0.46
MARK3-207ENST00000553942 MARF1Q9Y4F3 1742 aaKnown RBP12.15□□□□□ -0.46
MARK3-207ENST00000553942 AMPHP49418 695 aa12.15□□□□□ -0.46
MARK3-207ENST00000553942 AEBP1Q8IUX7 1158 aa12.15□□□□□ -0.46
MARK3-207ENST00000553942 PXDNQ92626 1479 aa12.15□□□□□ -0.46
MARK3-207ENST00000553942 ROBO1Q9Y6N7 1651 aa12.15□□□□□ -0.47
MARK3-207ENST00000553942 SPATA31A3Q5VYP0 1347 aa12.14□□□□□ -0.47
MARK3-207ENST00000553942 ADRA2BP18089 450 aa12.14□□□□□ -0.47
MARK3-207ENST00000553942 CERKQ8TCT0 537 aa12.14□□□□□ -0.47
MARK3-207ENST00000553942 PEAK1Q9H792 1746 aa12.14□□□□□ -0.47
MARK3-207ENST00000553942 TRPM3Q9HCF6 1732 aaPredicted RBP12.14□□□□□ -0.47
MARK3-207ENST00000553942 LRRC59Q96AG4 307 aaKnown RBP12.13□□□□□ -0.47
MARK3-207ENST00000553942 ANKRD26Q9UPS8 1709 aa12.13□□□□□ -0.47
MARK3-207ENST00000553942 DIAPH1O60610 1272 aaKnown RBP12.13□□□□□ -0.47
MARK3-207ENST00000553942 EIF4A2Q14240 407 aaKnown RBP12.13□□□□□ -0.47
MARK3-207ENST00000553942 SOS2Q07890 1332 aaPredicted RBP12.12□□□□□ -0.47
MARK3-207ENST00000553942 MED1Q15648 1581 aaPredicted RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms