RNA–Protein interactions for RNA: ENST00000553532.5

TIMELESS-203, Transcript of timeless circadian regulator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TIMELESS, Length 5,121 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMELESS-203ENST00000553532 CFAP74Q9C0B2 1584 aa13□□□□□ -0.33
TIMELESS-203ENST00000553532 SHANK2Q9UPX8 1470 aa13□□□□□ -0.33
TIMELESS-203ENST00000553532 B4GALNT3Q6L9W6 998 aa12.99□□□□□ -0.33
TIMELESS-203ENST00000553532 RRP7AQ9Y3A4 280 aaKnown RBP12.99□□□□□ -0.33
TIMELESS-203ENST00000553532 SF3A1Q15459 793 aaKnown RBP12.99□□□□□ -0.33
TIMELESS-203ENST00000553532 GPATCH8Q9UKJ3 1502 aaKnown RBP12.99□□□□□ -0.33
TIMELESS-203ENST00000553532 CDCA7Q9BWT1 371 aaPredicted RBP12.99□□□□□ -0.33
TIMELESS-203ENST00000553532 KIAA0556O60303 1618 aa12.99□□□□□ -0.33
TIMELESS-203ENST00000553532 BRMS1Q9HCU9 246 aa12.99□□□□□ -0.33
TIMELESS-203ENST00000553532 SAFBQ15424 915 aaKnown RBP eCLIP12.98□□□□□ -0.33
TIMELESS-203ENST00000553532 PRKAR2BP31323 418 aa12.98□□□□□ -0.33
TIMELESS-203ENST00000553532 CLUAP1Q96AJ1 413 aa12.98□□□□□ -0.33
TIMELESS-203ENST00000553532 NGLY1Q96IV0 654 aa12.98□□□□□ -0.33
TIMELESS-203ENST00000553532 UHRF1BP1Q6BDS2 1440 aa12.98□□□□□ -0.33
TIMELESS-203ENST00000553532 NBR1Q14596 966 aa12.98□□□□□ -0.33
TIMELESS-203ENST00000553532 KLHL34Q8N239 644 aa12.98□□□□□ -0.33
TIMELESS-203ENST00000553532 SMARCC1Q92922 1105 aaPredicted RBP12.98□□□□□ -0.33
TIMELESS-203ENST00000553532 C14orf93Q9H972 538 aaKnown RBP12.98□□□□□ -0.33
TIMELESS-203ENST00000553532 PPP2R1AP30153 589 aa12.97□□□□□ -0.33
TIMELESS-203ENST00000553532 CCDC158Q5M9N0 1113 aa12.97□□□□□ -0.33
TIMELESS-203ENST00000553532 VPS53Q5VIR6 699 aa12.97□□□□□ -0.33
TIMELESS-203ENST00000553532 RALYLQ86SE5 291 aaKnown RBP12.97□□□□□ -0.33
TIMELESS-203ENST00000553532 CEP89Q96ST8 783 aa12.97□□□□□ -0.33
TIMELESS-203ENST00000553532 SCAF11Q99590 1463 aaKnown RBP12.97□□□□□ -0.33
TIMELESS-203ENST00000553532 CPLX1O14810 134 aa12.97□□□□□ -0.33
TIMELESS-203ENST00000553532 IDI1Q13907 227 aa12.97□□□□□ -0.33
TIMELESS-203ENST00000553532 ANKRD45Q5TZF3 282 aa12.97□□□□□ -0.33
TIMELESS-203ENST00000553532 KIF21AQ7Z4S6 1674 aa12.97□□□□□ -0.33
TIMELESS-203ENST00000553532 H3BQV1 296 aa12.97□□□□□ -0.33
TIMELESS-203ENST00000553532 EXOC5O00471 708 aa12.97□□□□□ -0.33
TIMELESS-203ENST00000553532 PSMA5P28066 241 aa12.97□□□□□ -0.33
TIMELESS-203ENST00000553532 IFFO2Q5TF58 517 aa12.97□□□□□ -0.33
TIMELESS-203ENST00000553532 INTS3Q68E01 1043 aaKnown RBP12.97□□□□□ -0.33
TIMELESS-203ENST00000553532 EIF4G3O43432 1585 aaKnown RBP12.97□□□□□ -0.33
TIMELESS-203ENST00000553532 TMOD3Q9NYL9 352 aa12.97□□□□□ -0.33
TIMELESS-203ENST00000553532 HDGFL1Q5TGJ6 251 aa12.96□□□□□ -0.33
TIMELESS-203ENST00000553532 ATP10AO60312 1499 aa12.96□□□□□ -0.33
TIMELESS-203ENST00000553532 FBXW7Q969H0 707 aa12.96□□□□□ -0.33
TIMELESS-203ENST00000553532 TMOD2Q9NZR1 351 aa12.96□□□□□ -0.33
TIMELESS-203ENST00000553532 APPP05067 770 aa12.96□□□□□ -0.33
TIMELESS-203ENST00000553532 HMOX1P09601 288 aa12.96□□□□□ -0.34
TIMELESS-203ENST00000553532 NUTM2GQ5VZR2 741 aa12.96□□□□□ -0.34
TIMELESS-203ENST00000553532 RRP1P56182 461 aaKnown RBP12.95□□□□□ -0.34
TIMELESS-203ENST00000553532 ELL2O00472 640 aaPredicted RBP12.95□□□□□ -0.34
TIMELESS-203ENST00000553532 SULT6B1Q6IMI4 303 aa12.95□□□□□ -0.34
TIMELESS-203ENST00000553532 KRT28Q7Z3Y7 464 aa12.95□□□□□ -0.34
TIMELESS-203ENST00000553532 RILPL2Q969X0 211 aa12.95□□□□□ -0.34
TIMELESS-203ENST00000553532 NACAP1Q9BZK3 213 aa12.95□□□□□ -0.34
TIMELESS-203ENST00000553532 GNAT3A8MTJ3 354 aa12.95□□□□□ -0.34
TIMELESS-203ENST00000553532 DNTTIP2Q5QJE6 756 aaKnown RBP12.95□□□□□ -0.34
TIMELESS-203ENST00000553532 CNTROBQ8N137 903 aa12.95□□□□□ -0.34
TIMELESS-203ENST00000553532 PDIA4P13667 645 aaKnown RBP12.95□□□□□ -0.34
TIMELESS-203ENST00000553532 CCDC43Q96MW1 224 aaKnown RBP12.95□□□□□ -0.34
TIMELESS-203ENST00000553532 NOP58Q9Y2X3 529 aaKnown RBP12.95□□□□□ -0.34
TIMELESS-203ENST00000553532 SRCIN1Q9C0H9 1055 aa12.94□□□□□ -0.34
TIMELESS-203ENST00000553532 ZNF287Q9HBT7 754 aa12.94□□□□□ -0.34
TIMELESS-203ENST00000553532 CTTNBP2Q8WZ74 1663 aa12.94□□□□□ -0.34
TIMELESS-203ENST00000553532 ZPR1O75312 459 aa12.94□□□□□ -0.34
TIMELESS-203ENST00000553532 SLF2Q8IX21 1173 aa12.94□□□□□ -0.34
TIMELESS-203ENST00000553532 TCP11L2Q8N4U5 519 aa12.94□□□□□ -0.34
TIMELESS-203ENST00000553532 C19orf44Q9H6X5 657 aa12.94□□□□□ -0.34
TIMELESS-203ENST00000553532 UBAP1LF5GYI3 381 aa12.94□□□□□ -0.34
TIMELESS-203ENST00000553532 IL27Q8NEV9 243 aa12.94□□□□□ -0.34
TIMELESS-203ENST00000553532 TBX22Q9Y458 520 aa12.94□□□□□ -0.34
TIMELESS-203ENST00000553532 GNAI2P04899 355 aa12.93□□□□□ -0.34
TIMELESS-203ENST00000553532 CCAR1Q8IX12 1150 aaKnown RBP12.93□□□□□ -0.34
TIMELESS-203ENST00000553532 ANKRD20A12PQ8NF67 263 aa12.93□□□□□ -0.34
TIMELESS-203ENST00000553532 PDE3AQ14432 1141 aa12.93□□□□□ -0.34
TIMELESS-203ENST00000553532 DDX54Q8TDD1 881 aaKnown RBP12.93□□□□□ -0.34
TIMELESS-203ENST00000553532 GCC1Q96CN9 775 aa12.93□□□□□ -0.34
TIMELESS-203ENST00000553532 TAOK2Q9UL54 1235 aa12.93□□□□□ -0.34
TIMELESS-203ENST00000553532 TWISTNBQ3B726 338 aaPredicted RBP12.93□□□□□ -0.34
TIMELESS-203ENST00000553532 MPHOSPH8Q99549 860 aa12.93□□□□□ -0.34
TIMELESS-203ENST00000553532 DHX16O60231 1041 aaKnown RBP12.93□□□□□ -0.34
TIMELESS-203ENST00000553532 IGHMBP2P38935 993 aaKnown RBP12.93□□□□□ -0.34
TIMELESS-203ENST00000553532 CNNM1Q9NRU3 951 aa12.92□□□□□ -0.34
TIMELESS-203ENST00000553532 TPM1P09493 284 aa12.92□□□□□ -0.34
TIMELESS-203ENST00000553532 RIMS2Q9UQ26 1411 aa12.92□□□□□ -0.34
TIMELESS-203ENST00000553532 NFE2L2Q16236 605 aa12.92□□□□□ -0.34
TIMELESS-203ENST00000553532 LRRC59Q96AG4 307 aaKnown RBP12.92□□□□□ -0.34
TIMELESS-203ENST00000553532 SLC12A5Q9H2X9 1139 aa12.92□□□□□ -0.34
TIMELESS-203ENST00000553532 TSR1Q2NL82 804 aaKnown RBP12.92□□□□□ -0.34
TIMELESS-203ENST00000553532 CCDC57Q2TAC2 916 aa12.92□□□□□ -0.34
TIMELESS-203ENST00000553532 TRPM2O94759 1503 aa12.91□□□□□ -0.34
TIMELESS-203ENST00000553532 PLCB2Q00722 1185 aa12.91□□□□□ -0.34
TIMELESS-203ENST00000553532 DRC7Q8IY82 874 aa12.91□□□□□ -0.34
TIMELESS-203ENST00000553532 NUP153P49790 1475 aaKnown RBP12.91□□□□□ -0.34
TIMELESS-203ENST00000553532 ANKRD36BQ8N2N9 1353 aa12.91□□□□□ -0.34
TIMELESS-203ENST00000553532 MCM2P49736 904 aa12.91□□□□□ -0.34
TIMELESS-203ENST00000553532 BTBD11A6QL63 1104 aa12.9□□□□□ -0.34
TIMELESS-203ENST00000553532 AKAP2Q9Y2D5 859 aa12.9□□□□□ -0.34
TIMELESS-203ENST00000553532 AIMP1Q12904 312 aaKnown RBP12.9□□□□□ -0.34
TIMELESS-203ENST00000553532 SKOR2Q2VWA4 1001 aaPredicted RBP12.9□□□□□ -0.34
TIMELESS-203ENST00000553532 LARP1Q6PKG0 1096 aaKnown RBP12.9□□□□□ -0.34
TIMELESS-203ENST00000553532 NFXL1Q6ZNB6 911 aa12.9□□□□□ -0.34
TIMELESS-203ENST00000553532 FAM161AQ3B820 660 aa12.9□□□□□ -0.34
TIMELESS-203ENST00000553532 NEUROD6Q96NK8 337 aa12.9□□□□□ -0.34
TIMELESS-203ENST00000553532 TPM3P06753 285 aa12.9□□□□□ -0.34
TIMELESS-203ENST00000553532 WWC2Q6AWC2 1192 aa12.89□□□□□ -0.35
TIMELESS-203ENST00000553532 IFNL2Q8IZJ0 200 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms