RNA–Protein interactions for RNA: ENST00000553368.1

APEX1-204, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 3

Gene APEX1, Length 304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-204ENST00000553368 ARHGEF28Q8N1W1 1705 aaKnown RBP22.03■■□□□ 1.12
APEX1-204ENST00000553368 CRYBG1Q9Y4K1 1723 aa22.03■■□□□ 1.12
APEX1-204ENST00000553368 NGDNQ8NEJ9 315 aaKnown RBP22.02■■□□□ 1.12
APEX1-204ENST00000553368 ATP7BP35670 1465 aa22.02■■□□□ 1.12
APEX1-204ENST00000553368 SF3B2Q13435 895 aaKnown RBP22.01■■□□□ 1.11
APEX1-204ENST00000553368 FAM98CQ17RN3 349 aaKnown RBP22■■□□□ 1.11
APEX1-204ENST00000553368 NUDT16Q96DE0 195 aaKnown RBP22■■□□□ 1.11
APEX1-204ENST00000553368 ITSN1Q15811 1721 aa21.99■■□□□ 1.11
APEX1-204ENST00000553368 SPATA31A5Q5VU36 1347 aa21.99■■□□□ 1.11
APEX1-204ENST00000553368 SPATA31A7Q8IWB4 1347 aa21.99■■□□□ 1.11
APEX1-204ENST00000553368 PAK3O75914 559 aaPredicted RBP21.98■■□□□ 1.11
APEX1-204ENST00000553368 CDK19Q9BWU1 502 aa21.96■■□□□ 1.11
APEX1-204ENST00000553368 KIAA1210Q9ULL0 1709 aa21.94■■□□□ 1.1
APEX1-204ENST00000553368 A0A0G2JS52 829 aa21.94■■□□□ 1.1
APEX1-204ENST00000553368 MYT1Q01538 1121 aa21.94■■□□□ 1.1
APEX1-204ENST00000553368 PRDM11Q9NQV5 511 aa21.94■■□□□ 1.1
APEX1-204ENST00000553368 POLR3AO14802 1390 aaPredicted RBP21.94■■□□□ 1.1
APEX1-204ENST00000553368 THSD7AQ9UPZ6 1657 aa21.93■■□□□ 1.1
APEX1-204ENST00000553368 TOPAZ1Q8N9V7 1692 aa21.92■■□□□ 1.1
APEX1-204ENST00000553368 PHRF1Q9P1Y6 1649 aaKnown RBP21.92■■□□□ 1.1
APEX1-204ENST00000553368 KIAA0232Q92628 1395 aa21.92■■□□□ 1.1
APEX1-204ENST00000553368 PLEKHG3A1L390 1219 aa21.92■■□□□ 1.1
APEX1-204ENST00000553368 BAG6P46379 1132 aa21.92■■□□□ 1.1
APEX1-204ENST00000553368 CCDC61Q9Y6R9 512 aa21.92■■□□□ 1.1
APEX1-204ENST00000553368 NBPF8Q3BBV2 869 aa21.91■■□□□ 1.1
APEX1-204ENST00000553368 ACEP12821 1306 aa21.9■■□□□ 1.1
APEX1-204ENST00000553368 SPATA31A1Q5TZJ5 1347 aa21.9■■□□□ 1.1
APEX1-204ENST00000553368 CHRNA2Q15822 529 aa21.88■■□□□ 1.09
APEX1-204ENST00000553368 NBPF1Q3BBV0 1214 aa21.88■■□□□ 1.09
APEX1-204ENST00000553368 RGPD1P0DJD0 1748 aa21.88■■□□□ 1.09
APEX1-204ENST00000553368 FAM182BQ5T319 152 aa21.87■■□□□ 1.09
APEX1-204ENST00000553368 ZC3H6P61129 1189 aaKnown RBP21.86■■□□□ 1.09
APEX1-204ENST00000553368 DISP2A7MBM2 1401 aa21.86■■□□□ 1.09
APEX1-204ENST00000553368 LRP5O75197 1615 aa21.85■■□□□ 1.09
APEX1-204ENST00000553368 EN1Q05925 392 aaPredicted RBP21.85■■□□□ 1.09
APEX1-204ENST00000553368 NUTM2GQ5VZR2 741 aa21.85■■□□□ 1.09
APEX1-204ENST00000553368 STRN4Q9NRL3 753 aa21.84■■□□□ 1.09
APEX1-204ENST00000553368 USP19O94966 1318 aa21.83■■□□□ 1.09
APEX1-204ENST00000553368 NRKQ7Z2Y5 1582 aa21.83■■□□□ 1.09
APEX1-204ENST00000553368 CPDO75976 1380 aa21.83■■□□□ 1.08
APEX1-204ENST00000553368 TNS1Q9HBL0 1735 aaKnown RBP21.83■■□□□ 1.08
APEX1-204ENST00000553368 ABTB2Q8N961 1025 aa21.82■■□□□ 1.08
APEX1-204ENST00000553368 SSH2Q76I76 1423 aa21.81■■□□□ 1.08
APEX1-204ENST00000553368 PSDA5PKW4 1024 aaPredicted RBP21.81■■□□□ 1.08
APEX1-204ENST00000553368 BARGINQ6ZT62 677 aa21.81■■□□□ 1.08
APEX1-204ENST00000553368 CAMTA1Q9Y6Y1 1673 aa21.81■■□□□ 1.08
APEX1-204ENST00000553368 CENPJQ9HC77 1338 aaPredicted RBP21.8■■□□□ 1.08
APEX1-204ENST00000553368 LMO7Q8WWI1 1683 aa21.8■■□□□ 1.08
APEX1-204ENST00000553368 BRD4O60885 1362 aaPredicted RBP21.79■■□□□ 1.08
APEX1-204ENST00000553368 FAM196AQ6ZSG2 479 aa21.79■■□□□ 1.08
APEX1-204ENST00000553368 PPIP5K1Q6PFW1 1433 aa21.79■■□□□ 1.08
APEX1-204ENST00000553368 EVA1CP58658 441 aa21.78■■□□□ 1.08
APEX1-204ENST00000553368 SRPK2P78362 688 aaKnown RBP21.78■■□□□ 1.08
APEX1-204ENST00000553368 NLRP13Q86W25 1043 aa21.78■■□□□ 1.08
APEX1-204ENST00000553368 GCP02774 474 aa21.77■■□□□ 1.08
APEX1-204ENST00000553368 EZH2Q15910 746 aaKnown RBP21.77■■□□□ 1.08
APEX1-204ENST00000553368 CAMKK2Q96RR4 588 aa21.77■■□□□ 1.08
APEX1-204ENST00000553368 CABP2Q9NPB3 220 aa21.77■■□□□ 1.08
APEX1-204ENST00000553368 TRIM37O94972 964 aa21.76■■□□□ 1.07
APEX1-204ENST00000553368 LARP1Q6PKG0 1096 aaKnown RBP21.76■■□□□ 1.07
APEX1-204ENST00000553368 USP35Q9P2H5 1018 aa21.75■■□□□ 1.07
APEX1-204ENST00000553368 TCP11L2Q8N4U5 519 aa21.74■■□□□ 1.07
APEX1-204ENST00000553368 THRAP3Q9Y2W1 955 aaKnown RBP21.74■■□□□ 1.07
APEX1-204ENST00000553368 QRICH2Q9H0J4 1663 aa21.74■■□□□ 1.07
APEX1-204ENST00000553368 R3HDM1Q15032 1099 aaKnown RBP21.73■■□□□ 1.07
APEX1-204ENST00000553368 PARD3Q8TEW0 1356 aa21.73■■□□□ 1.07
APEX1-204ENST00000553368 USP6P35125 1406 aa21.72■■□□□ 1.07
APEX1-204ENST00000553368 PDE3BQ13370 1112 aa21.72■■□□□ 1.07
APEX1-204ENST00000553368 L3MBTL2Q969R5 705 aa21.72■■□□□ 1.07
APEX1-204ENST00000553368 CABP1Q9NZU7 370 aa21.72■■□□□ 1.07
APEX1-204ENST00000553368 COL5A2P05997 1499 aaPredicted RBP21.71■■□□□ 1.07
APEX1-204ENST00000553368 APBA3O96018 575 aa21.71■■□□□ 1.07
APEX1-204ENST00000553368 SLIT3O75094 1523 aa21.7■■□□□ 1.06
APEX1-204ENST00000553368 PARP4Q9UKK3 1724 aaKnown RBP21.69■■□□□ 1.06
APEX1-204ENST00000553368 NLRP6P59044 892 aa21.68■■□□□ 1.06
APEX1-204ENST00000553368 AATKQ6ZMQ8 1374 aa21.68■■□□□ 1.06
APEX1-204ENST00000553368 RREB1Q92766 1687 aa21.67■■□□□ 1.06
APEX1-204ENST00000553368 CRB1P82279 1406 aa21.67■■□□□ 1.06
APEX1-204ENST00000553368 TRPM1Q7Z4N2 1603 aa21.66■■□□□ 1.06
APEX1-204ENST00000553368 EVC2Q86UK5 1308 aa21.66■■□□□ 1.06
APEX1-204ENST00000553368 COL18A1P39060 1754 aa21.64■■□□□ 1.06
APEX1-204ENST00000553368 PIK3C2AO00443 1686 aa21.64■■□□□ 1.05
APEX1-204ENST00000553368 C11orf95C9JLR9 678 aaPredicted RBP21.64■■□□□ 1.05
APEX1-204ENST00000553368 SIN3AQ96ST3 1273 aa21.63■■□□□ 1.05
APEX1-204ENST00000553368 NUP188Q5SRE5 1749 aa21.63■■□□□ 1.05
APEX1-204ENST00000553368 ZNF692Q9BU19 519 aaPredicted RBP21.62■■□□□ 1.05
APEX1-204ENST00000553368 PEAK1Q9H792 1746 aa21.61■■□□□ 1.05
APEX1-204ENST00000553368 TTC21BQ7Z4L5 1316 aa21.6■■□□□ 1.05
APEX1-204ENST00000553368 ZBTB7CA1YPR0 619 aa21.6■■□□□ 1.05
APEX1-204ENST00000553368 AXIN2Q9Y2T1 843 aa21.6■■□□□ 1.05
APEX1-204ENST00000553368 OVOS2A0A0G2JMS6 1433 aa21.59■■□□□ 1.05
APEX1-204ENST00000553368 OVOS2A0A0J9YW53 1432 aa21.59■■□□□ 1.05
APEX1-204ENST00000553368 OVOS2Q6IE36 1432 aa21.59■■□□□ 1.05
APEX1-204ENST00000553368 ARHGEF25Q86VW2 580 aa21.59■■□□□ 1.05
APEX1-204ENST00000553368 ROCK2O75116 1388 aaKnown RBP21.59■■□□□ 1.05
APEX1-204ENST00000553368 AKAP12Q02952 1782 aa21.59■■□□□ 1.05
APEX1-204ENST00000553368 WDR17Q8IZU2 1322 aa21.58■■□□□ 1.05
APEX1-204ENST00000553368 CPSF1Q10570 1443 aaKnown RBP21.58■■□□□ 1.05
APEX1-204ENST00000553368 NBPF14Q5TI25 921 aa21.58■■□□□ 1.05
APEX1-204ENST00000553368 LRRC37A3O60309 1634 aa21.58■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms