RNA–Protein interactions for RNA: ENST00000553336.5

NGDN-203, Transcript of neuroguidin, humanhuman

TSL 3

Gene NGDN, Length 712 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NGDN-203ENST00000553336 CCDC61Q9Y6R9 512 aa24.43■■□□□ 1.5
NGDN-203ENST00000553336 SRCAPQ6ZRS2 3230 aa24.4■■□□□ 1.5
NGDN-203ENST00000553336 ITSN1Q15811 1721 aa24.4■■□□□ 1.5
NGDN-203ENST00000553336 POLR3AO14802 1390 aaPredicted RBP24.4■■□□□ 1.5
NGDN-203ENST00000553336 ACEP12821 1306 aa24.39■■□□□ 1.5
NGDN-203ENST00000553336 PLEKHG3A1L390 1219 aa24.39■■□□□ 1.49
NGDN-203ENST00000553336 NBPF8Q3BBV2 869 aa24.39■■□□□ 1.49
NGDN-203ENST00000553336 BLMP54132 1417 aaPredicted RBP24.38■■□□□ 1.49
NGDN-203ENST00000553336 KRT27Q7Z3Y8 459 aa24.38■■□□□ 1.49
NGDN-203ENST00000553336 L3MBTL2Q969R5 705 aa24.38■■□□□ 1.49
NGDN-203ENST00000553336 PRDM11Q9NQV5 511 aa24.38■■□□□ 1.49
NGDN-203ENST00000553336 COL14A1Q05707 1796 aaKnown RBP24.37■■□□□ 1.49
NGDN-203ENST00000553336 ZRANB1Q9UGI0 708 aa24.37■■□□□ 1.49
NGDN-203ENST00000553336 CENPJQ9HC77 1338 aaPredicted RBP24.36■■□□□ 1.49
NGDN-203ENST00000553336 FAM98CQ17RN3 349 aaKnown RBP24.36■■□□□ 1.49
NGDN-203ENST00000553336 NRAPQ86VF7 1730 aa24.35■■□□□ 1.49
NGDN-203ENST00000553336 BRWD3Q6RI45 1802 aa24.35■■□□□ 1.49
NGDN-203ENST00000553336 A0A0G2JS52 829 aa24.35■■□□□ 1.49
NGDN-203ENST00000553336 MYT1Q01538 1121 aa24.35■■□□□ 1.49
NGDN-203ENST00000553336 NUTM2GQ5VZR2 741 aa24.35■■□□□ 1.49
NGDN-203ENST00000553336 CRYBG1Q9Y4K1 1723 aa24.35■■□□□ 1.49
NGDN-203ENST00000553336 SRPK2P78362 688 aaKnown RBP24.34■■□□□ 1.49
NGDN-203ENST00000553336 SIN3AQ96ST3 1273 aa24.34■■□□□ 1.49
NGDN-203ENST00000553336 KIAA0232Q92628 1395 aa24.33■■□□□ 1.49
NGDN-203ENST00000553336 TOPAZ1Q8N9V7 1692 aa24.33■■□□□ 1.49
NGDN-203ENST00000553336 SPATA31A5Q5VU36 1347 aa24.33■■□□□ 1.48
NGDN-203ENST00000553336 SPATA31A7Q8IWB4 1347 aa24.33■■□□□ 1.48
NGDN-203ENST00000553336 SF3B2Q13435 895 aaKnown RBP24.32■■□□□ 1.48
NGDN-203ENST00000553336 CABP2Q9NPB3 220 aa24.32■■□□□ 1.48
NGDN-203ENST00000553336 ZC3H6P61129 1189 aaKnown RBP24.31■■□□□ 1.48
NGDN-203ENST00000553336 CHRNA2Q15822 529 aa24.31■■□□□ 1.48
NGDN-203ENST00000553336 DEFB132Q7Z7B7 95 aa24.3■■□□□ 1.48
NGDN-203ENST00000553336 ABTB2Q8N961 1025 aa24.3■■□□□ 1.48
NGDN-203ENST00000553336 PPIP5K1Q6PFW1 1433 aa24.29■■□□□ 1.48
NGDN-203ENST00000553336 NEUROD1Q13562 356 aa24.29■■□□□ 1.48
NGDN-203ENST00000553336 SPATA31A1Q5TZJ5 1347 aa24.26■■□□□ 1.47
NGDN-203ENST00000553336 PHRF1Q9P1Y6 1649 aaKnown RBP24.25■■□□□ 1.47
NGDN-203ENST00000553336 STRN4Q9NRL3 753 aa24.25■■□□□ 1.47
NGDN-203ENST00000553336 NLRP13Q86W25 1043 aa24.24■■□□□ 1.47
NGDN-203ENST00000553336 CABP1Q9NZU7 370 aa24.24■■□□□ 1.47
NGDN-203ENST00000553336 USP19O94966 1318 aa24.24■■□□□ 1.47
NGDN-203ENST00000553336 QRICH2Q9H0J4 1663 aa24.23■■□□□ 1.47
NGDN-203ENST00000553336 BRD4O60885 1362 aaPredicted RBP24.22■■□□□ 1.47
NGDN-203ENST00000553336 EVA1CP58658 441 aa24.22■■□□□ 1.47
NGDN-203ENST00000553336 ROCK2O75116 1388 aaKnown RBP24.21■■□□□ 1.47
NGDN-203ENST00000553336 CPDO75976 1380 aa24.21■■□□□ 1.47
NGDN-203ENST00000553336 EVC2Q86UK5 1308 aa24.21■■□□□ 1.47
NGDN-203ENST00000553336 GCP02774 474 aa24.21■■□□□ 1.47
NGDN-203ENST00000553336 FAM182BQ5T319 152 aa24.21■■□□□ 1.47
NGDN-203ENST00000553336 TRPM1Q7Z4N2 1603 aa24.2■■□□□ 1.46
NGDN-203ENST00000553336 THSD7AQ9UPZ6 1657 aa24.19■■□□□ 1.46
NGDN-203ENST00000553336 BAG6P46379 1132 aa24.19■■□□□ 1.46
NGDN-203ENST00000553336 NRKQ7Z2Y5 1582 aa24.19■■□□□ 1.46
NGDN-203ENST00000553336 USP35Q9P2H5 1018 aa24.18■■□□□ 1.46
NGDN-203ENST00000553336 USP6P35125 1406 aa24.18■■□□□ 1.46
NGDN-203ENST00000553336 SSH2Q76I76 1423 aa24.18■■□□□ 1.46
NGDN-203ENST00000553336 CAMTA1Q9Y6Y1 1673 aa24.17■■□□□ 1.46
NGDN-203ENST00000553336 LARP1Q6PKG0 1096 aaKnown RBP24.16■■□□□ 1.46
NGDN-203ENST00000553336 NLRP6P59044 892 aa24.15■■□□□ 1.46
NGDN-203ENST00000553336 BARGINQ6ZT62 677 aa24.15■■□□□ 1.46
NGDN-203ENST00000553336 EN1Q05925 392 aaPredicted RBP24.12■■□□□ 1.45
NGDN-203ENST00000553336 FAM196AQ6ZSG2 479 aa24.12■■□□□ 1.45
NGDN-203ENST00000553336 TCP11L2Q8N4U5 519 aa24.12■■□□□ 1.45
NGDN-203ENST00000553336 LMO7Q8WWI1 1683 aa24.11■■□□□ 1.45
NGDN-203ENST00000553336 ZNF692Q9BU19 519 aaPredicted RBP24.11■■□□□ 1.45
NGDN-203ENST00000553336 ZBTB7CA1YPR0 619 aa24.09■■□□□ 1.45
NGDN-203ENST00000553336 PDE3BQ13370 1112 aa24.09■■□□□ 1.45
NGDN-203ENST00000553336 THRAP3Q9Y2W1 955 aaKnown RBP24.09■■□□□ 1.45
NGDN-203ENST00000553336 AATKQ6ZMQ8 1374 aa24.08■■□□□ 1.45
NGDN-203ENST00000553336 TTC21BQ7Z4L5 1316 aa24.08■■□□□ 1.44
NGDN-203ENST00000553336 COL5A2P05997 1499 aaPredicted RBP24.07■■□□□ 1.44
NGDN-203ENST00000553336 RGPD1P0DJD0 1748 aa24.07■■□□□ 1.44
NGDN-203ENST00000553336 SLIT3O75094 1523 aa24.07■■□□□ 1.44
NGDN-203ENST00000553336 TRIM37O94972 964 aa24.07■■□□□ 1.44
NGDN-203ENST00000553336 DISP2A7MBM2 1401 aa24.07■■□□□ 1.44
NGDN-203ENST00000553336 CARD11Q9BXL7 1154 aa24.06■■□□□ 1.44
NGDN-203ENST00000553336 PSDA5PKW4 1024 aaPredicted RBP24.04■■□□□ 1.44
NGDN-203ENST00000553336 PIK3C2AO00443 1686 aa24.04■■□□□ 1.44
NGDN-203ENST00000553336 SBNO2Q9Y2G9 1366 aa24.03■■□□□ 1.44
NGDN-203ENST00000553336 CRB1P82279 1406 aa24.03■■□□□ 1.44
NGDN-203ENST00000553336 CPSF1Q10570 1443 aaKnown RBP24.03■■□□□ 1.44
NGDN-203ENST00000553336 TTC21AQ8NDW8 1320 aa24.03■■□□□ 1.44
NGDN-203ENST00000553336 EZH2Q15910 746 aaKnown RBP24.02■■□□□ 1.44
NGDN-203ENST00000553336 KCNH5Q8NCM2 988 aa24.02■■□□□ 1.44
NGDN-203ENST00000553336 CAMKK2Q96RR4 588 aa24.02■■□□□ 1.44
NGDN-203ENST00000553336 TONSLQ96HA7 1378 aa24.02■■□□□ 1.44
NGDN-203ENST00000553336 APBA3O96018 575 aa24.01■■□□□ 1.43
NGDN-203ENST00000553336 ARHGEF25Q86VW2 580 aa24.01■■□□□ 1.43
NGDN-203ENST00000553336 AXIN2Q9Y2T1 843 aa24.01■■□□□ 1.43
NGDN-203ENST00000553336 KTN1Q86UP2 1357 aaKnown RBP24.01■■□□□ 1.43
NGDN-203ENST00000553336 TNS1Q9HBL0 1735 aaKnown RBP24.01■■□□□ 1.43
NGDN-203ENST00000553336 TOM1L2Q6ZVM7 507 aa23.99■■□□□ 1.43
NGDN-203ENST00000553336 SOX12O15370 315 aa23.98■■□□□ 1.43
NGDN-203ENST00000553336 AKAP12Q02952 1782 aa23.98■■□□□ 1.43
NGDN-203ENST00000553336 R3HDM1Q15032 1099 aaKnown RBP23.97■■□□□ 1.43
NGDN-203ENST00000553336 WDR17Q8IZU2 1322 aa23.97■■□□□ 1.43
NGDN-203ENST00000553336 PARD3Q8TEW0 1356 aa23.96■■□□□ 1.43
NGDN-203ENST00000553336 COL18A1P39060 1754 aa23.96■■□□□ 1.43
NGDN-203ENST00000553336 C11orf95C9JLR9 678 aaPredicted RBP23.95■■□□□ 1.42
NGDN-203ENST00000553336 PARP4Q9UKK3 1724 aaKnown RBP23.94■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms