RNA–Protein interactions for RNA: ENST00000553116.5

RAB5B-210, Transcript of RAB5B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5B, Length 3,322 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-210ENST00000553116 PMFBP1Q8TBY8 1022 aa10.89□□□□□ -0.67
RAB5B-210ENST00000553116 CPSF1Q10570 1443 aaKnown RBP10.89□□□□□ -0.67
RAB5B-210ENST00000553116 PIK3R4Q99570 1358 aa10.89□□□□□ -0.67
RAB5B-210ENST00000553116 XRN1Q8IZH2 1706 aaKnown RBP10.89□□□□□ -0.67
RAB5B-210ENST00000553116 NGDNQ8NEJ9 315 aaKnown RBP10.89□□□□□ -0.67
RAB5B-210ENST00000553116 ACEP12821 1306 aa10.89□□□□□ -0.67
RAB5B-210ENST00000553116 AKAP12Q02952 1782 aa10.88□□□□□ -0.67
RAB5B-210ENST00000553116 GOLGA2Q08379 1002 aa10.88□□□□□ -0.67
RAB5B-210ENST00000553116 MON2Q7Z3U7 1717 aa10.88□□□□□ -0.67
RAB5B-210ENST00000553116 RCAN3Q9UKA8 241 aa10.88□□□□□ -0.67
RAB5B-210ENST00000553116 RUNDC1Q96C34 613 aa10.87□□□□□ -0.67
RAB5B-210ENST00000553116 FBLN1P23142 703 aa10.87□□□□□ -0.67
RAB5B-210ENST00000553116 RBM33Q96EV2 1170 aaKnown RBP10.87□□□□□ -0.67
RAB5B-210ENST00000553116 RRP7AQ9Y3A4 280 aaKnown RBP10.87□□□□□ -0.67
RAB5B-210ENST00000553116 NPHP4O75161 1426 aaPredicted RBP10.87□□□□□ -0.67
RAB5B-210ENST00000553116 ZRANB1Q9UGI0 708 aa10.87□□□□□ -0.67
RAB5B-210ENST00000553116 MAP2P11137 1827 aaKnown RBP10.87□□□□□ -0.67
RAB5B-210ENST00000553116 DIAPH1O60610 1272 aaKnown RBP10.86□□□□□ -0.67
RAB5B-210ENST00000553116 RGPD8O14715 1765 aaPredicted RBP10.86□□□□□ -0.67
RAB5B-210ENST00000553116 MAPK8IP3Q9UPT6 1336 aa10.86□□□□□ -0.67
RAB5B-210ENST00000553116 TOPAZ1Q8N9V7 1692 aa10.86□□□□□ -0.67
RAB5B-210ENST00000553116 SOX12O15370 315 aa10.86□□□□□ -0.67
RAB5B-210ENST00000553116 CHD2O14647 1828 aaKnown RBP10.86□□□□□ -0.67
RAB5B-210ENST00000553116 NKTRP30414 1462 aaKnown RBP10.85□□□□□ -0.67
RAB5B-210ENST00000553116 TCP11L2Q8N4U5 519 aa10.85□□□□□ -0.67
RAB5B-210ENST00000553116 TTC21BQ7Z4L5 1316 aa10.84□□□□□ -0.67
RAB5B-210ENST00000553116 PLEKHG3A1L390 1219 aa10.84□□□□□ -0.67
RAB5B-210ENST00000553116 NEFMP07197 916 aa10.84□□□□□ -0.67
RAB5B-210ENST00000553116 ERICH6BQ5W0A0 696 aa10.84□□□□□ -0.67
RAB5B-210ENST00000553116 NGEFQ8N5V2 710 aa10.84□□□□□ -0.67
RAB5B-210ENST00000553116 ANP32EQ9BTT0 268 aa10.84□□□□□ -0.67
RAB5B-210ENST00000553116 EMILIN1Q9Y6C2 1016 aa10.84□□□□□ -0.67
RAB5B-210ENST00000553116 RRS1Q15050 365 aaKnown RBP10.84□□□□□ -0.67
RAB5B-210ENST00000553116 POLKQ9UBT6 870 aa10.84□□□□□ -0.67
RAB5B-210ENST00000553116 USP6P35125 1406 aa10.83□□□□□ -0.67
RAB5B-210ENST00000553116 RRP1P56182 461 aaKnown RBP10.83□□□□□ -0.68
RAB5B-210ENST00000553116 PPP4R2Q9NY27 417 aa10.83□□□□□ -0.68
RAB5B-210ENST00000553116 ZNF521Q96K83 1311 aa10.82□□□□□ -0.68
RAB5B-210ENST00000553116 E9PSI1 815 aa10.82□□□□□ -0.68
RAB5B-210ENST00000553116 PAK3O75914 559 aaPredicted RBP10.82□□□□□ -0.68
RAB5B-210ENST00000553116 COL3A1P02461 1466 aaPredicted RBP10.82□□□□□ -0.68
RAB5B-210ENST00000553116 NALCNQ8IZF0 1738 aa10.82□□□□□ -0.68
RAB5B-210ENST00000553116 DUSP27Q5VZP5 1158 aa10.81□□□□□ -0.68
RAB5B-210ENST00000553116 WWC1Q8IX03 1113 aa10.81□□□□□ -0.68
RAB5B-210ENST00000553116 PNNQ9H307 717 aaKnown RBP10.81□□□□□ -0.68
RAB5B-210ENST00000553116 FMN2Q9NZ56 1722 aa10.81□□□□□ -0.68
RAB5B-210ENST00000553116 SLFN5Q08AF3 891 aa10.81□□□□□ -0.68
RAB5B-210ENST00000553116 ANKARQ7Z5J8 1434 aa10.81□□□□□ -0.68
RAB5B-210ENST00000553116 NRKQ7Z2Y5 1582 aa10.81□□□□□ -0.68
RAB5B-210ENST00000553116 B4GALNT3Q6L9W6 998 aa10.8□□□□□ -0.68
RAB5B-210ENST00000553116 PROSER2Q86WR7 435 aaPredicted RBP10.8□□□□□ -0.68
RAB5B-210ENST00000553116 RNF123Q5XPI4 1314 aa10.8□□□□□ -0.68
RAB5B-210ENST00000553116 TTC21AQ8NDW8 1320 aa10.8□□□□□ -0.68
RAB5B-210ENST00000553116 HMOX1P09601 288 aa10.79□□□□□ -0.68
RAB5B-210ENST00000553116 IQSEC2Q5JU85 1478 aa10.79□□□□□ -0.68
RAB5B-210ENST00000553116 AATKQ6ZMQ8 1374 aa10.79□□□□□ -0.68
RAB5B-210ENST00000553116 PNPLA6Q8IY17 1366 aa10.79□□□□□ -0.68
RAB5B-210ENST00000553116 KCNA4P22459 653 aa10.79□□□□□ -0.68
RAB5B-210ENST00000553116 HSPA2P54652 639 aa10.79□□□□□ -0.68
RAB5B-210ENST00000553116 ESCO1Q5FWF5 840 aa10.79□□□□□ -0.68
RAB5B-210ENST00000553116 SPINK5Q9NQ38 1064 aaPredicted RBP10.79□□□□□ -0.68
RAB5B-210ENST00000553116 CDK12Q9NYV4 1490 aaPredicted RBP10.79□□□□□ -0.68
RAB5B-210ENST00000553116 ADGRL3Q9HAR2 1447 aa10.79□□□□□ -0.68
RAB5B-210ENST00000553116 PLIN1O60240 522 aa10.79□□□□□ -0.68
RAB5B-210ENST00000553116 NUTM2GQ5VZR2 741 aa10.79□□□□□ -0.68
RAB5B-210ENST00000553116 DAXXQ9UER7 740 aaPredicted RBP10.79□□□□□ -0.68
RAB5B-210ENST00000553116 PHF8Q9UPP1 1060 aa10.79□□□□□ -0.68
RAB5B-210ENST00000553116 DMRT2Q9Y5R5 561 aa10.79□□□□□ -0.68
RAB5B-210ENST00000553116 PRKAR2BP31323 418 aa10.78□□□□□ -0.68
RAB5B-210ENST00000553116 NLRP6P59044 892 aa10.78□□□□□ -0.68
RAB5B-210ENST00000553116 CCDC136Q96JN2 1154 aa10.78□□□□□ -0.68
RAB5B-210ENST00000553116 OVOS2A0A0J9YW53 1432 aa10.77□□□□□ -0.68
RAB5B-210ENST00000553116 OVOS2Q6IE36 1432 aa10.77□□□□□ -0.68
RAB5B-210ENST00000553116 ABTB2Q8N961 1025 aa10.77□□□□□ -0.69
RAB5B-210ENST00000553116 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.77□□□□□ -0.69
RAB5B-210ENST00000553116 FCHSD2O94868 740 aa10.77□□□□□ -0.69
RAB5B-210ENST00000553116 TMPOP42166 694 aaKnown RBP10.77□□□□□ -0.69
RAB5B-210ENST00000553116 LRRC7Q96NW7 1537 aa10.77□□□□□ -0.69
RAB5B-210ENST00000553116 RIPK4P57078 832 aa10.76□□□□□ -0.69
RAB5B-210ENST00000553116 PSME1Q06323 249 aa10.76□□□□□ -0.69
RAB5B-210ENST00000553116 PLEKHG5O94827 1062 aa10.76□□□□□ -0.69
RAB5B-210ENST00000553116 CANXP27824 592 aaKnown RBP10.76□□□□□ -0.69
RAB5B-210ENST00000553116 AMPHP49418 695 aa10.76□□□□□ -0.69
RAB5B-210ENST00000553116 CCDC27Q2M243 656 aa10.76□□□□□ -0.69
RAB5B-210ENST00000553116 WDR63Q8IWG1 891 aa10.76□□□□□ -0.69
RAB5B-210ENST00000553116 PLEKHF1Q96S99 279 aa10.76□□□□□ -0.69
RAB5B-210ENST00000553116 MYH16Q9H6N6 1097 aa10.76□□□□□ -0.69
RAB5B-210ENST00000553116 IL13P35225 146 aa10.75□□□□□ -0.69
RAB5B-210ENST00000553116 RSPH6AQ9H0K4 717 aa10.75□□□□□ -0.69
RAB5B-210ENST00000553116 LMOD2Q6P5Q4 547 aa10.74□□□□□ -0.69
RAB5B-210ENST00000553116 EXOC6Q8TAG9 804 aa10.74□□□□□ -0.69
RAB5B-210ENST00000553116 SSH2Q76I76 1423 aa10.74□□□□□ -0.69
RAB5B-210ENST00000553116 PIK3C2AO00443 1686 aa10.74□□□□□ -0.69
RAB5B-210ENST00000553116 TRMT2AQ8IZ69 625 aaKnown RBP10.74□□□□□ -0.69
RAB5B-210ENST00000553116 NWD1Q149M9 1564 aa10.74□□□□□ -0.69
RAB5B-210ENST00000553116 ZBTB7CA1YPR0 619 aa10.73□□□□□ -0.69
RAB5B-210ENST00000553116 HSP90AB2PQ58FF8 381 aa10.73□□□□□ -0.69
RAB5B-210ENST00000553116 MAP3K19Q56UN5 1328 aa10.73□□□□□ -0.69
RAB5B-210ENST00000553116 XPCQ01831 940 aaPredicted RBP10.73□□□□□ -0.69
RAB5B-210ENST00000553116 EIF4A2Q14240 407 aaKnown RBP10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms