RNA–Protein interactions for RNA: ENST00000553078.5

CNOT2-243, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 3

Gene CNOT2, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-243ENST00000553078 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.24□□□□□ -0.299e-7■■□□□ 12
CNOT2-243ENST00000553078 WWC1Q8IX03 1113 aa13.24□□□□□ -0.29
CNOT2-243ENST00000553078 CPSF1Q10570 1443 aaKnown RBP13.23□□□□□ -0.29
CNOT2-243ENST00000553078 MON2Q7Z3U7 1717 aa13.23□□□□□ -0.29
CNOT2-243ENST00000553078 CALD1Q05682 793 aaKnown RBP13.23□□□□□ -0.29
CNOT2-243ENST00000553078 NEUROD2Q15784 382 aa13.23□□□□□ -0.29
CNOT2-243ENST00000553078 PLPPR3Q6T4P5 718 aa13.23□□□□□ -0.29
CNOT2-243ENST00000553078 ERICH6Q7L0X2 663 aa13.23□□□□□ -0.29
CNOT2-243ENST00000553078 TRMT2AQ8IZ69 625 aaKnown RBP13.23□□□□□ -0.29
CNOT2-243ENST00000553078 CRBNQ96SW2 442 aa13.23□□□□□ -0.29
CNOT2-243ENST00000553078 COL3A1P02461 1466 aaPredicted RBP13.23□□□□□ -0.29
CNOT2-243ENST00000553078 CDK12Q9NYV4 1490 aaPredicted RBP13.23□□□□□ -0.29
CNOT2-243ENST00000553078 CT47B1P0C2W7 299 aaPredicted RBP13.22□□□□□ -0.29
CNOT2-243ENST00000553078 MS4A1P11836 297 aa13.22□□□□□ -0.29
CNOT2-243ENST00000553078 TBX22Q9Y458 520 aa13.22□□□□□ -0.29
CNOT2-243ENST00000553078 AATKQ6ZMQ8 1374 aa13.21□□□□□ -0.29
CNOT2-243ENST00000553078 CEP170BQ9Y4F5 1589 aaPredicted RBP13.21□□□□□ -0.29
CNOT2-243ENST00000553078 TCERG1O14776 1098 aaKnown RBP13.21□□□□□ -0.29
CNOT2-243ENST00000553078 PIK3R4Q99570 1358 aa13.2□□□□□ -0.3
CNOT2-243ENST00000553078 ROBO2Q9HCK4 1378 aa13.2□□□□□ -0.3
CNOT2-243ENST00000553078 AKAP12Q02952 1782 aa13.2□□□□□ -0.3
CNOT2-243ENST00000553078 PLIN1O60240 522 aa13.2□□□□□ -0.3
CNOT2-243ENST00000553078 CEBPAP49715 358 aaPredicted RBP13.2□□□□□ -0.3
CNOT2-243ENST00000553078 LMOD3Q0VAK6 560 aa13.2□□□□□ -0.3
CNOT2-243ENST00000553078 AAMPQ13685 434 aa13.2□□□□□ -0.3
CNOT2-243ENST00000553078 RRP7AQ9Y3A4 280 aaKnown RBP13.2□□□□□ -0.3
CNOT2-243ENST00000553078 PNPLA6Q8IY17 1366 aa13.2□□□□□ -0.3
CNOT2-243ENST00000553078 IL16Q14005 1332 aa13.19□□□□□ -0.3
CNOT2-243ENST00000553078 TOPAZ1Q8N9V7 1692 aa13.19□□□□□ -0.3
CNOT2-243ENST00000553078 PPM1GO15355 546 aaPredicted RBP13.19□□□□□ -0.3
CNOT2-243ENST00000553078 MYT1Q01538 1121 aa13.19□□□□□ -0.3
CNOT2-243ENST00000553078 CENPQQ7L2Z9 268 aaPredicted RBP13.19□□□□□ -0.3
CNOT2-243ENST00000553078 RIMS1Q86UR5 1692 aaKnown RBP13.18□□□□□ -0.3
CNOT2-243ENST00000553078 FANCIQ9NVI1 1328 aa13.18□□□□□ -0.3
CNOT2-243ENST00000553078 FCHSD2O94868 740 aa13.18□□□□□ -0.3
CNOT2-243ENST00000553078 PDE3AQ14432 1141 aa13.18□□□□□ -0.3
CNOT2-243ENST00000553078 ANKARQ7Z5J8 1434 aa13.17□□□□□ -0.3
CNOT2-243ENST00000553078 LTKP29376 864 aa13.17□□□□□ -0.3
CNOT2-243ENST00000553078 ANP32AP39687 249 aaKnown RBP13.17□□□□□ -0.3
CNOT2-243ENST00000553078 AMOTL2Q9Y2J4 779 aa13.17□□□□□ -0.3
CNOT2-243ENST00000553078 TTC21AQ8NDW8 1320 aa13.16□□□□□ -0.3
CNOT2-243ENST00000553078 TMPOP42166 694 aaKnown RBP13.16□□□□□ -0.3
CNOT2-243ENST00000553078 SLC26A8Q96RN1 970 aa13.16□□□□□ -0.3
CNOT2-243ENST00000553078 PHF23Q9BUL5 403 aaPredicted RBP13.16□□□□□ -0.3
CNOT2-243ENST00000553078 LRRC7Q96NW7 1537 aa13.16□□□□□ -0.3
CNOT2-243ENST00000553078 ZNF142P52746 1687 aaPredicted RBP13.15□□□□□ -0.3
CNOT2-243ENST00000553078 PLEKHG3A1L390 1219 aa13.15□□□□□ -0.3
CNOT2-243ENST00000553078 NME9Q86XW9 330 aa13.15□□□□□ -0.3
CNOT2-243ENST00000553078 POLKQ9UBT6 870 aa13.15□□□□□ -0.3
CNOT2-243ENST00000553078 NRKQ7Z2Y5 1582 aa13.15□□□□□ -0.3
CNOT2-243ENST00000553078 USP6P35125 1406 aa13.14□□□□□ -0.31
CNOT2-243ENST00000553078 XRN1Q8IZH2 1706 aaKnown RBP13.14□□□□□ -0.31
CNOT2-243ENST00000553078 RIPK4P57078 832 aa13.14□□□□□ -0.31
CNOT2-243ENST00000553078 TTC21BQ7Z4L5 1316 aa13.13□□□□□ -0.31
CNOT2-243ENST00000553078 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.13□□□□□ -0.31
CNOT2-243ENST00000553078 PRKAR2BP31323 418 aa13.13□□□□□ -0.31
CNOT2-243ENST00000553078 ANKLE2Q86XL3 938 aa13.13□□□□□ -0.31
CNOT2-243ENST00000553078 FTSJ3Q8IY81 847 aaKnown RBP13.13□□□□□ -0.31
CNOT2-243ENST00000553078 FRAT1Q92837 279 aaPredicted RBP13.13□□□□□ -0.31
CNOT2-243ENST00000553078 PLEKHF1Q96S99 279 aa13.13□□□□□ -0.31
CNOT2-243ENST00000553078 SPINK5Q9NQ38 1064 aaPredicted RBP13.13□□□□□ -0.31
CNOT2-243ENST00000553078 PTPRUQ92729 1446 aa13.13□□□□□ -0.31
CNOT2-243ENST00000553078 ACEP12821 1306 aa13.13□□□□□ -0.31
CNOT2-243ENST00000553078 NGDNQ8NEJ9 315 aaKnown RBP13.12□□□□□ -0.31
CNOT2-243ENST00000553078 KIF16BQ96L93 1317 aa13.12□□□□□ -0.31
CNOT2-243ENST00000553078 PRR36Q9H6K5 1346 aa13.12□□□□□ -0.31
CNOT2-243ENST00000553078 BCAR3O75815 825 aa13.11□□□□□ -0.31
CNOT2-243ENST00000553078 RARSP54136 660 aaKnown RBP13.11□□□□□ -0.31
CNOT2-243ENST00000553078 HAP1P54257 671 aaPredicted RBP13.11□□□□□ -0.31
CNOT2-243ENST00000553078 NFE2L2Q16236 605 aa13.11□□□□□ -0.31
CNOT2-243ENST00000553078 ZNF428Q96B54 188 aa13.11□□□□□ -0.31
CNOT2-243ENST00000553078 C20orf194Q5TEA3 1177 aa13.1□□□□□ -0.31
CNOT2-243ENST00000553078 ZKSCAN2Q63HK3 967 aa13.1□□□□□ -0.31
CNOT2-243ENST00000553078 PMFBP1Q8TBY8 1022 aa13.1□□□□□ -0.31
CNOT2-243ENST00000553078 RSPH6AQ9H0K4 717 aa13.1□□□□□ -0.31
CNOT2-243ENST00000553078 CHMP4BQ9H444 224 aaKnown RBP13.1□□□□□ -0.31
CNOT2-243ENST00000553078 SMC4Q9NTJ3 1288 aa13.1□□□□□ -0.31
CNOT2-243ENST00000553078 OVOS2A0A0J9YW53 1432 aa13.1□□□□□ -0.31
CNOT2-243ENST00000553078 OVOS2Q6IE36 1432 aa13.1□□□□□ -0.31
CNOT2-243ENST00000553078 IPO8O15397 1037 aaKnown RBP13.09□□□□□ -0.31
CNOT2-243ENST00000553078 EMILIN1Q9Y6C2 1016 aa13.09□□□□□ -0.31
CNOT2-243ENST00000553078 MAP2P11137 1827 aaKnown RBP13.09□□□□□ -0.31
CNOT2-243ENST00000553078 IL13P35225 146 aa13.08□□□□□ -0.32
CNOT2-243ENST00000553078 GNAI1P63096 354 aa13.08□□□□□ -0.32
CNOT2-243ENST00000553078 CLUAP1Q96AJ1 413 aa13.08□□□□□ -0.32
CNOT2-243ENST00000553078 DMRT2Q9Y5R5 561 aa13.08□□□□□ -0.32
CNOT2-243ENST00000553078 ADAMTSL3P82987 1691 aa13.08□□□□□ -0.32
CNOT2-243ENST00000553078 NALCNQ8IZF0 1738 aa13.08□□□□□ -0.32
CNOT2-243ENST00000553078 NUTM2FA1L443 756 aa13.07□□□□□ -0.32
CNOT2-243ENST00000553078 FMN2Q9NZ56 1722 aa13.06□□□□□ -0.32
CNOT2-243ENST00000553078 HMOX1P09601 288 aa13.06□□□□□ -0.32
CNOT2-243ENST00000553078 RRS1Q15050 365 aaKnown RBP13.06□□□□□ -0.32
CNOT2-243ENST00000553078 ALDH1L2Q3SY69 923 aa13.06□□□□□ -0.32
CNOT2-243ENST00000553078 IFT57Q9NWB7 429 aa13.06□□□□□ -0.32
CNOT2-243ENST00000553078 TRIM35Q9UPQ4 493 aa13.06□□□□□ -0.32
CNOT2-243ENST00000553078 KDM2BQ8NHM5 1336 aa13.06□□□□□ -0.32
CNOT2-243ENST00000553078 SBNO1A3KN83 1393 aa13.06□□□□□ -0.32
CNOT2-243ENST00000553078 FLT4P35916 1363 aa13.06□□□□□ -0.32
CNOT2-243ENST00000553078 USP31Q70CQ4 1352 aa13.06□□□□□ -0.32
CNOT2-243ENST00000553078 EXOSC9Q06265 439 aaKnown RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms