RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 ANKRD50Q9ULJ7 1429 aa7.93□□□□□ -1.14
CKAP4-203ENST00000553039 ZBTB7AO95365 584 aa7.92□□□□□ -1.14
CKAP4-203ENST00000553039 HSPA6P17066 643 aa7.92□□□□□ -1.14
CKAP4-203ENST00000553039 BCL11BQ9C0K0 894 aaPredicted RBP7.92□□□□□ -1.14
CKAP4-203ENST00000553039 RPGRIP1LQ68CZ1 1315 aa7.92□□□□□ -1.14
CKAP4-203ENST00000553039 CCDC144AA2RUR9 1427 aa7.92□□□□□ -1.14
CKAP4-203ENST00000553039 PXDNQ92626 1479 aa7.92□□□□□ -1.14
CKAP4-203ENST00000553039 PTGER2P43116 358 aa7.91□□□□□ -1.14
CKAP4-203ENST00000553039 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.91□□□□□ -1.14
CKAP4-203ENST00000553039 BRWD3Q6RI45 1802 aa7.91□□□□□ -1.14
CKAP4-203ENST00000553039 SBNO1A3KN83 1393 aa7.9□□□□□ -1.14
CKAP4-203ENST00000553039 NUP155O75694 1391 aa7.9□□□□□ -1.14
CKAP4-203ENST00000553039 SPATA31A1Q5TZJ5 1347 aa7.9□□□□□ -1.14
CKAP4-203ENST00000553039 GRIN3BO60391 1043 aa7.9□□□□□ -1.14
CKAP4-203ENST00000553039 BARGINQ6ZT62 677 aa7.9□□□□□ -1.14
CKAP4-203ENST00000553039 ARXQ96QS3 562 aa7.9□□□□□ -1.14
CKAP4-203ENST00000553039 MTFR1LQ9H019 292 aa7.9□□□□□ -1.14
CKAP4-203ENST00000553039 PRDM11Q9NQV5 511 aa7.9□□□□□ -1.14
CKAP4-203ENST00000553039 STK32BQ9NY57 414 aa7.9□□□□□ -1.14
CKAP4-203ENST00000553039 POLA2Q14181 598 aa7.89□□□□□ -1.15
CKAP4-203ENST00000553039 FAM50AQ14320 339 aaKnown RBP7.89□□□□□ -1.15
CKAP4-203ENST00000553039 ERICH6Q7L0X2 663 aa7.89□□□□□ -1.15
CKAP4-203ENST00000553039 WAPLQ7Z5K2 1190 aa7.89□□□□□ -1.15
CKAP4-203ENST00000553039 STK26Q9P289 416 aa7.89□□□□□ -1.15
CKAP4-203ENST00000553039 PCDH10Q9P2E7 1040 aa7.89□□□□□ -1.15
CKAP4-203ENST00000553039 XRN1Q8IZH2 1706 aaKnown RBP7.89□□□□□ -1.15
CKAP4-203ENST00000553039 SIRT1Q96EB6 747 aa7.88□□□□□ -1.15
CKAP4-203ENST00000553039 GPBP1L1Q9HC44 474 aaPredicted RBP7.88□□□□□ -1.15
CKAP4-203ENST00000553039 STRN4Q9NRL3 753 aa7.88□□□□□ -1.15
CKAP4-203ENST00000553039 USP35Q9P2H5 1018 aa7.88□□□□□ -1.15
CKAP4-203ENST00000553039 TIMELESSQ9UNS1 1208 aa7.88□□□□□ -1.15
CKAP4-203ENST00000553039 ZBTB12Q9Y330 459 aaPredicted RBP7.88□□□□□ -1.15
CKAP4-203ENST00000553039 RGPD1P0DJD0 1748 aa7.87□□□□□ -1.15
CKAP4-203ENST00000553039 GCC2Q8IWJ2 1684 aa7.87□□□□□ -1.15
CKAP4-203ENST00000553039 PRELPP51888 382 aa7.87□□□□□ -1.15
CKAP4-203ENST00000553039 NBR1Q14596 966 aa7.87□□□□□ -1.15
CKAP4-203ENST00000553039 PELP1Q8IZL8 1130 aaKnown RBP7.87□□□□□ -1.15
CKAP4-203ENST00000553039 TCP11L2Q8N4U5 519 aa7.87□□□□□ -1.15
CKAP4-203ENST00000553039 TNS3Q68CZ2 1445 aa7.86□□□□□ -1.15
CKAP4-203ENST00000553039 PTPN23Q9H3S7 1636 aa7.86□□□□□ -1.15
CKAP4-203ENST00000553039 ADGRB2O60241 1585 aa7.86□□□□□ -1.15
CKAP4-203ENST00000553039 CAPN15O75808 1086 aa7.86□□□□□ -1.15
CKAP4-203ENST00000553039 APLP1P51693 650 aa7.86□□□□□ -1.15
CKAP4-203ENST00000553039 SLC15A2Q16348 729 aa7.86□□□□□ -1.15
CKAP4-203ENST00000553039 THRAP3Q9Y2W1 955 aaKnown RBP7.86□□□□□ -1.15
CKAP4-203ENST00000553039 MARF1Q9Y4F3 1742 aaKnown RBP7.86□□□□□ -1.15
CKAP4-203ENST00000553039 MYO5BQ9ULV0 1848 aa7.85□□□□□ -1.15
CKAP4-203ENST00000553039 PDGFDQ9GZP0 370 aaPredicted RBP7.85□□□□□ -1.15
CKAP4-203ENST00000553039 NAIPQ13075 1403 aa7.85□□□□□ -1.15
CKAP4-203ENST00000553039 GPRASP1Q5JY77 1395 aa7.84□□□□□ -1.15
CKAP4-203ENST00000553039 PAK3O75914 559 aaPredicted RBP7.84□□□□□ -1.15
CKAP4-203ENST00000553039 POLD1P28340 1107 aa7.84□□□□□ -1.15
CKAP4-203ENST00000553039 TNS4Q8IZW8 715 aa7.84□□□□□ -1.15
CKAP4-203ENST00000553039 PMFBP1Q8TBY8 1022 aa7.84□□□□□ -1.15
CKAP4-203ENST00000553039 RRBP1Q9P2E9 1410 aaKnown RBP7.84□□□□□ -1.15
CKAP4-203ENST00000553039 USP32Q8NFA0 1604 aa7.83□□□□□ -1.16
CKAP4-203ENST00000553039 SLC16A10Q8TF71 515 aa7.83□□□□□ -1.16
CKAP4-203ENST00000553039 SGIP1Q9BQI5 828 aa7.83□□□□□ -1.16
CKAP4-203ENST00000553039 PRAG1Q86YV5 1406 aa7.83□□□□□ -1.16
CKAP4-203ENST00000553039 NWD2Q9ULI1 1742 aa7.83□□□□□ -1.16
CKAP4-203ENST00000553039 ABCC11Q96J66 1382 aa7.83□□□□□ -1.16
CKAP4-203ENST00000553039 MAP3K5Q99683 1374 aa7.83□□□□□ -1.16
CKAP4-203ENST00000553039 TULP1O00294 542 aaPredicted RBP7.82□□□□□ -1.16
CKAP4-203ENST00000553039 SLC34A2O95436 690 aa7.82□□□□□ -1.16
CKAP4-203ENST00000553039 TXNRD1Q16881 649 aa7.82□□□□□ -1.16
CKAP4-203ENST00000553039 NALCNQ8IZF0 1738 aa7.82□□□□□ -1.16
CKAP4-203ENST00000553039 NGDNQ8NEJ9 315 aaKnown RBP7.82□□□□□ -1.16
CKAP4-203ENST00000553039 ANO8Q9HCE9 1232 aaPredicted RBP7.82□□□□□ -1.16
CKAP4-203ENST00000553039 GTF3C3Q9Y5Q9 886 aa7.82□□□□□ -1.16
CKAP4-203ENST00000553039 ZC3H6P61129 1189 aaKnown RBP7.81□□□□□ -1.16
CKAP4-203ENST00000553039 CHRNA2Q15822 529 aa7.81□□□□□ -1.16
CKAP4-203ENST00000553039 COL13A1Q5TAT6 717 aaPredicted RBP7.81□□□□□ -1.16
CKAP4-203ENST00000553039 HS6ST3Q8IZP7 471 aa7.81□□□□□ -1.16
CKAP4-203ENST00000553039 DNAJC5GQ8N7S2 189 aa7.81□□□□□ -1.16
CKAP4-203ENST00000553039 NRXN3Q9Y4C0 1643 aa7.81□□□□□ -1.16
CKAP4-203ENST00000553039 CHD4Q14839 1912 aa7.8□□□□□ -1.16
CKAP4-203ENST00000553039 DDB1Q16531 1140 aa7.8□□□□□ -1.16
CKAP4-203ENST00000553039 TMEM132EQ6IEE7 984 aa7.8□□□□□ -1.16
CKAP4-203ENST00000553039 LARP1Q6PKG0 1096 aaKnown RBP7.8□□□□□ -1.16
CKAP4-203ENST00000553039 PLCD3Q8N3E9 789 aa7.8□□□□□ -1.16
CKAP4-203ENST00000553039 SPINK5Q9NQ38 1064 aaPredicted RBP7.8□□□□□ -1.16
CKAP4-203ENST00000553039 CDCA7Q9BWT1 371 aaPredicted RBP7.79□□□□□ -1.16
CKAP4-203ENST00000553039 POGKQ9P215 609 aa7.79□□□□□ -1.16
CKAP4-203ENST00000553039 DAXXQ9UER7 740 aaPredicted RBP7.79□□□□□ -1.16
CKAP4-203ENST00000553039 CDC42BPGQ6DT37 1551 aa7.79□□□□□ -1.16
CKAP4-203ENST00000553039 CAMTA1Q9Y6Y1 1673 aa7.79□□□□□ -1.16
CKAP4-203ENST00000553039 VPS8Q8N3P4 1428 aa7.78□□□□□ -1.16
CKAP4-203ENST00000553039 NEXMIFQ5QGS0 1516 aa7.78□□□□□ -1.16
CKAP4-203ENST00000553039 DLC1Q96QB1 1528 aa7.78□□□□□ -1.16
CKAP4-203ENST00000553039 KIAA0232Q92628 1395 aa7.78□□□□□ -1.16
CKAP4-203ENST00000553039 ROCK1Q13464 1354 aa7.77□□□□□ -1.17
CKAP4-203ENST00000553039 DHX57Q6P158 1386 aaKnown RBP7.77□□□□□ -1.17
CKAP4-203ENST00000553039 AATKQ6ZMQ8 1374 aa7.77□□□□□ -1.17
CKAP4-203ENST00000553039 CEP350Q5VT06 3117 aa7.77□□□□□ -1.17
CKAP4-203ENST00000553039 IQGAP3Q86VI3 1631 aa7.77□□□□□ -1.17
CKAP4-203ENST00000553039 ACIN1Q9UKV3 1341 aaKnown RBP7.77□□□□□ -1.17
CKAP4-203ENST00000553039 NRXN1Q9ULB1 1477 aa7.76□□□□□ -1.17
CKAP4-203ENST00000553039 EXOC5O00471 708 aa7.76□□□□□ -1.17
CKAP4-203ENST00000553039 TOMM70O94826 608 aa7.76□□□□□ -1.17
CKAP4-203ENST00000553039 TMEM132AQ24JP5 1023 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms