RNA–Protein interactions for RNA: ENST00000553038.5

ACTR6-213, Transcript of ARP6 actin related protein 6 homolog, humanhuman

TSL 1 (best)

Gene ACTR6, Length 2,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTR6-213ENST00000553038 COG3Q96JB2 828 aa18.7■□□□□ 0.58
ACTR6-213ENST00000553038 MON2Q7Z3U7 1717 aa18.7■□□□□ 0.58
ACTR6-213ENST00000553038 INSRP06213 1382 aa18.69■□□□□ 0.58
ACTR6-213ENST00000553038 ANKRD26Q9UPS8 1709 aa18.69■□□□□ 0.58
ACTR6-213ENST00000553038 SMG6Q86US8 1419 aaKnown RBP18.69■□□□□ 0.58
ACTR6-213ENST00000553038 RGPD8O14715 1765 aaPredicted RBP18.69■□□□□ 0.58
ACTR6-213ENST00000553038 NEFLP07196 543 aa18.68■□□□□ 0.58
ACTR6-213ENST00000553038 NUDCQ9Y266 331 aa18.68■□□□□ 0.58
ACTR6-213ENST00000553038 PPM1GO15355 546 aaPredicted RBP18.67■□□□□ 0.58
ACTR6-213ENST00000553038 ERICH6Q7L0X2 663 aa18.67■□□□□ 0.58
ACTR6-213ENST00000553038 ZRANB1Q9UGI0 708 aa18.67■□□□□ 0.58
ACTR6-213ENST00000553038 TTC21BQ7Z4L5 1316 aa18.67■□□□□ 0.58
ACTR6-213ENST00000553038 POLR3AO14802 1390 aaPredicted RBP18.67■□□□□ 0.58
ACTR6-213ENST00000553038 USP6P35125 1406 aa18.67■□□□□ 0.58
ACTR6-213ENST00000553038 IRX6P78412 446 aaPredicted RBP18.67■□□□□ 0.58
ACTR6-213ENST00000553038 ESCO1Q5FWF5 840 aa18.67■□□□□ 0.58
ACTR6-213ENST00000553038 PHF8Q9UPP1 1060 aa18.66■□□□□ 0.58
ACTR6-213ENST00000553038 PAK3O75914 559 aaPredicted RBP18.64■□□□□ 0.58
ACTR6-213ENST00000553038 TMEM94Q12767 1356 aa18.64■□□□□ 0.57
ACTR6-213ENST00000553038 ATF3P18847 181 aa18.64■□□□□ 0.57
ACTR6-213ENST00000553038 CCDC146Q8IYE0 955 aa18.64■□□□□ 0.57
ACTR6-213ENST00000553038 STRCQ7RTU9 1775 aa18.63■□□□□ 0.57
ACTR6-213ENST00000553038 C19orf44Q9H6X5 657 aa18.63■□□□□ 0.57
ACTR6-213ENST00000553038 CDCA7LQ96GN5 454 aa18.62■□□□□ 0.57
ACTR6-213ENST00000553038 FBLN1P23142 703 aa18.62■□□□□ 0.57
ACTR6-213ENST00000553038 TTC21AQ8NDW8 1320 aa18.61■□□□□ 0.57
ACTR6-213ENST00000553038 SOX12O15370 315 aa18.61■□□□□ 0.57
ACTR6-213ENST00000553038 NRKQ7Z2Y5 1582 aa18.61■□□□□ 0.57
ACTR6-213ENST00000553038 PSME1Q06323 249 aa18.61■□□□□ 0.57
ACTR6-213ENST00000553038 U2SURPO15042 1029 aaKnown RBP18.6■□□□□ 0.57
ACTR6-213ENST00000553038 STRCP1A6NGW2 1772 aa18.6■□□□□ 0.57
ACTR6-213ENST00000553038 U2AF1L5P0DN76 240 aaPredicted RBP18.59■□□□□ 0.57
ACTR6-213ENST00000553038 U2AF1Q01081 240 aaKnown RBP eCLIP18.59■□□□□ 0.57
ACTR6-213ENST00000553038 ZNF335Q9H4Z2 1342 aaPredicted RBP18.58■□□□□ 0.57
ACTR6-213ENST00000553038 SHPRHQ149N8 1683 aa18.58■□□□□ 0.57
ACTR6-213ENST00000553038 ORAI2Q96SN7 254 aa18.58■□□□□ 0.56
ACTR6-213ENST00000553038 PDE3BQ13370 1112 aa18.57■□□□□ 0.56
ACTR6-213ENST00000553038 RRS1Q15050 365 aaKnown RBP18.57■□□□□ 0.56
ACTR6-213ENST00000553038 NUTM2GQ5VZR2 741 aa18.57■□□□□ 0.56
ACTR6-213ENST00000553038 POLKQ9UBT6 870 aa18.57■□□□□ 0.56
ACTR6-213ENST00000553038 MSH6P52701 1360 aa18.57■□□□□ 0.56
ACTR6-213ENST00000553038 DIAPH1O60610 1272 aaKnown RBP18.57■□□□□ 0.56
ACTR6-213ENST00000553038 PRKCSHP14314 528 aaPredicted RBP18.57■□□□□ 0.56
ACTR6-213ENST00000553038 NLRP6P59044 892 aa18.57■□□□□ 0.56
ACTR6-213ENST00000553038 DMRT2Q9Y5R5 561 aa18.57■□□□□ 0.56
ACTR6-213ENST00000553038 EMILIN1Q9Y6C2 1016 aa18.57■□□□□ 0.56
ACTR6-213ENST00000553038 APAF1O14727 1248 aa18.56■□□□□ 0.56
ACTR6-213ENST00000553038 ABTB2Q8N961 1025 aa18.56■□□□□ 0.56
ACTR6-213ENST00000553038 SSH2Q76I76 1423 aa18.55■□□□□ 0.56
ACTR6-213ENST00000553038 BCL11AQ9H165 835 aa18.55■□□□□ 0.56
ACTR6-213ENST00000553038 NCOA3Q9Y6Q9 1424 aa18.55■□□□□ 0.56
ACTR6-213ENST00000553038 FOXO3O43524 673 aa18.54■□□□□ 0.56
ACTR6-213ENST00000553038 XPCQ01831 940 aaPredicted RBP18.54■□□□□ 0.56
ACTR6-213ENST00000553038 CADPS2Q86UW7 1296 aa18.54■□□□□ 0.56
ACTR6-213ENST00000553038 OVOS2A0A0J9YW53 1432 aa18.54■□□□□ 0.56
ACTR6-213ENST00000553038 OVOS2Q6IE36 1432 aa18.54■□□□□ 0.56
ACTR6-213ENST00000553038 C1orf167Q5SNV9 1468 aa18.54■□□□□ 0.56
ACTR6-213ENST00000553038 AATKQ6ZMQ8 1374 aa18.54■□□□□ 0.56
ACTR6-213ENST00000553038 LMOD2Q6P5Q4 547 aa18.53■□□□□ 0.56
ACTR6-213ENST00000553038 MAP2P11137 1827 aaKnown RBP18.53■□□□□ 0.56
ACTR6-213ENST00000553038 ZNF521Q96K83 1311 aa18.53■□□□□ 0.56
ACTR6-213ENST00000553038 PLEKHG5O94827 1062 aa18.52■□□□□ 0.55
ACTR6-213ENST00000553038 TSHZ2Q9NRE2 1034 aa18.52■□□□□ 0.55
ACTR6-213ENST00000553038 RNF123Q5XPI4 1314 aa18.52■□□□□ 0.55
ACTR6-213ENST00000553038 DCCP43146 1447 aa18.51■□□□□ 0.55
ACTR6-213ENST00000553038 RUNDC1Q96C34 613 aa18.51■□□□□ 0.55
ACTR6-213ENST00000553038 PIK3C2AO00443 1686 aa18.5■□□□□ 0.55
ACTR6-213ENST00000553038 COL3A1P02461 1466 aaPredicted RBP18.5■□□□□ 0.55
ACTR6-213ENST00000553038 NEUROD2Q15784 382 aa18.49■□□□□ 0.55
ACTR6-213ENST00000553038 MST1RQ04912 1400 aa18.49■□□□□ 0.55
ACTR6-213ENST00000553038 CDK12Q9NYV4 1490 aaPredicted RBP18.49■□□□□ 0.55
ACTR6-213ENST00000553038 LRRC7Q96NW7 1537 aa18.49■□□□□ 0.55
ACTR6-213ENST00000553038 MAPK8IP3Q9UPT6 1336 aa18.49■□□□□ 0.55
ACTR6-213ENST00000553038 USP31Q70CQ4 1352 aa18.48■□□□□ 0.55
ACTR6-213ENST00000553038 PNPLA6Q8IY17 1366 aa18.48■□□□□ 0.55
ACTR6-213ENST00000553038 KIF1AQ12756 1690 aa18.48■□□□□ 0.55
ACTR6-213ENST00000553038 KRT28Q7Z3Y7 464 aa18.48■□□□□ 0.55
ACTR6-213ENST00000553038 AMPHP49418 695 aa18.47■□□□□ 0.55
ACTR6-213ENST00000553038 RCAN3Q9UKA8 241 aa18.47■□□□□ 0.55
ACTR6-213ENST00000553038 NEFMP07197 916 aa18.47■□□□□ 0.55
ACTR6-213ENST00000553038 PNNQ9H307 717 aaKnown RBP18.47■□□□□ 0.55
ACTR6-213ENST00000553038 SPINK5Q9NQ38 1064 aaPredicted RBP18.47■□□□□ 0.55
ACTR6-213ENST00000553038 RRP7AQ9Y3A4 280 aaKnown RBP18.47■□□□□ 0.55
ACTR6-213ENST00000553038 GOLGA2Q08379 1002 aa18.46■□□□□ 0.55
ACTR6-213ENST00000553038 ZBTB7CA1YPR0 619 aa18.45■□□□□ 0.54
ACTR6-213ENST00000553038 DUSP27Q5VZP5 1158 aa18.45■□□□□ 0.54
ACTR6-213ENST00000553038 TCP11L2Q8N4U5 519 aa18.45■□□□□ 0.54
ACTR6-213ENST00000553038 MAP3K19Q56UN5 1328 aa18.44■□□□□ 0.54
ACTR6-213ENST00000553038 SLFN5Q08AF3 891 aa18.44■□□□□ 0.54
ACTR6-213ENST00000553038 HMOX1P09601 288 aa18.44■□□□□ 0.54
ACTR6-213ENST00000553038 DDX17Q92841 729 aaKnown RBP18.44■□□□□ 0.54
ACTR6-213ENST00000553038 XIRP1Q702N8 1843 aaKnown RBP18.44■□□□□ 0.54
ACTR6-213ENST00000553038 IL13P35225 146 aa18.43■□□□□ 0.54
ACTR6-213ENST00000553038 ERICH6BQ5W0A0 696 aa18.43■□□□□ 0.54
ACTR6-213ENST00000553038 NGEFQ8N5V2 710 aa18.42■□□□□ 0.54
ACTR6-213ENST00000553038 HSP90AB2PQ58FF8 381 aa18.42■□□□□ 0.54
ACTR6-213ENST00000553038 TRMT2AQ8IZ69 625 aaKnown RBP18.42■□□□□ 0.54
ACTR6-213ENST00000553038 SBNO1A3KN83 1393 aa18.41■□□□□ 0.54
ACTR6-213ENST00000553038 NPHP3Q7Z494 1330 aa18.41■□□□□ 0.54
ACTR6-213ENST00000553038 IQSEC2Q5JU85 1478 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms