RNA–Protein interactions for RNA: ENST00000552862.1

CDK4-214, Transcript of cyclin dependent kinase 4, humanhuman

TSL 3

Gene CDK4, Length 447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-214ENST00000552862 NLRP13Q86W25 1043 aa17.99■□□□□ 0.47
CDK4-214ENST00000552862 FAM196AQ6ZSG2 479 aa17.97■□□□□ 0.47
CDK4-214ENST00000552862 ATP7BP35670 1465 aa17.96■□□□□ 0.47
CDK4-214ENST00000552862 PLEKHG5O94827 1062 aa17.96■□□□□ 0.47
CDK4-214ENST00000552862 FAM98CQ17RN3 349 aaKnown RBP17.96■□□□□ 0.47
CDK4-214ENST00000552862 NBPF8Q3BBV2 869 aa17.96■□□□□ 0.47
CDK4-214ENST00000552862 ABTB2Q8N961 1025 aa17.96■□□□□ 0.47
CDK4-214ENST00000552862 SPATA31A5Q5VU36 1347 aa17.96■□□□□ 0.46
CDK4-214ENST00000552862 SPATA31A7Q8IWB4 1347 aa17.96■□□□□ 0.46
CDK4-214ENST00000552862 THRAP3Q9Y2W1 955 aaKnown RBP17.95■□□□□ 0.46
CDK4-214ENST00000552862 SRPK2P78362 688 aaKnown RBP17.94■□□□□ 0.46
CDK4-214ENST00000552862 POLR3AO14802 1390 aaPredicted RBP17.93■□□□□ 0.46
CDK4-214ENST00000552862 PDE3BQ13370 1112 aa17.93■□□□□ 0.46
CDK4-214ENST00000552862 ZNF692Q9BU19 519 aaPredicted RBP17.93■□□□□ 0.46
CDK4-214ENST00000552862 COL14A1Q05707 1796 aaKnown RBP17.93■□□□□ 0.46
CDK4-214ENST00000552862 ACEP12821 1306 aa17.93■□□□□ 0.46
CDK4-214ENST00000552862 PRR36Q9H6K5 1346 aa17.93■□□□□ 0.46
CDK4-214ENST00000552862 GLI3P10071 1580 aa17.92■□□□□ 0.46
CDK4-214ENST00000552862 CENPJQ9HC77 1338 aaPredicted RBP17.92■□□□□ 0.46
CDK4-214ENST00000552862 RGPD8O14715 1765 aaPredicted RBP17.91■□□□□ 0.46
CDK4-214ENST00000552862 SLC24A1O60721 1099 aa17.91■□□□□ 0.46
CDK4-214ENST00000552862 BARGINQ6ZT62 677 aa17.91■□□□□ 0.46
CDK4-214ENST00000552862 ITSN1Q15811 1721 aa17.91■□□□□ 0.46
CDK4-214ENST00000552862 PARD3Q8TEW0 1356 aa17.91■□□□□ 0.46
CDK4-214ENST00000552862 SPATA31A1Q5TZJ5 1347 aa17.89■□□□□ 0.45
CDK4-214ENST00000552862 EVC2Q86UK5 1308 aa17.89■□□□□ 0.45
CDK4-214ENST00000552862 KIAA1210Q9ULL0 1709 aa17.89■□□□□ 0.45
CDK4-214ENST00000552862 EP400Q96L91 3159 aa17.89■□□□□ 0.45
CDK4-214ENST00000552862 NBPF14Q5TI25 921 aa17.87■□□□□ 0.45
CDK4-214ENST00000552862 DEFB132Q7Z7B7 95 aa17.87■□□□□ 0.45
CDK4-214ENST00000552862 TCP11L2Q8N4U5 519 aa17.87■□□□□ 0.45
CDK4-214ENST00000552862 CDCA7Q9BWT1 371 aaPredicted RBP17.87■□□□□ 0.45
CDK4-214ENST00000552862 STRN4Q9NRL3 753 aa17.87■□□□□ 0.45
CDK4-214ENST00000552862 CPDO75976 1380 aa17.87■□□□□ 0.45
CDK4-214ENST00000552862 KIAA0232Q92628 1395 aa17.87■□□□□ 0.45
CDK4-214ENST00000552862 ZC3H6P61129 1189 aaKnown RBP17.86■□□□□ 0.45
CDK4-214ENST00000552862 KCNH5Q8NCM2 988 aa17.86■□□□□ 0.45
CDK4-214ENST00000552862 PLCH1Q4KWH8 1693 aa17.86■□□□□ 0.45
CDK4-214ENST00000552862 GCP02774 474 aa17.85■□□□□ 0.45
CDK4-214ENST00000552862 ALS2Q96Q42 1657 aa17.85■□□□□ 0.45
CDK4-214ENST00000552862 TRPM3Q9HCF6 1732 aaPredicted RBP17.84■□□□□ 0.45
CDK4-214ENST00000552862 DISP2A7MBM2 1401 aa17.82■□□□□ 0.44
CDK4-214ENST00000552862 NLRP6P59044 892 aa17.82■□□□□ 0.44
CDK4-214ENST00000552862 PPIP5K1Q6PFW1 1433 aa17.81■□□□□ 0.44
CDK4-214ENST00000552862 DCAF8L1A6NGE4 600 aa17.81■□□□□ 0.44
CDK4-214ENST00000552862 USP19O94966 1318 aa17.8■□□□□ 0.44
CDK4-214ENST00000552862 EN1Q05925 392 aaPredicted RBP17.8■□□□□ 0.44
CDK4-214ENST00000552862 CHRNA2Q15822 529 aa17.8■□□□□ 0.44
CDK4-214ENST00000552862 NBPF1Q3BBV0 1214 aa17.8■□□□□ 0.44
CDK4-214ENST00000552862 CABP1Q9NZU7 370 aa17.8■□□□□ 0.44
CDK4-214ENST00000552862 ARHGEF28Q8N1W1 1705 aaKnown RBP17.8■□□□□ 0.44
CDK4-214ENST00000552862 ABCA3Q99758 1704 aa17.8■□□□□ 0.44
CDK4-214ENST00000552862 APBA3O96018 575 aa17.79■□□□□ 0.44
CDK4-214ENST00000552862 USP35Q9P2H5 1018 aa17.79■□□□□ 0.44
CDK4-214ENST00000552862 TTC21AQ8NDW8 1320 aa17.78■□□□□ 0.44
CDK4-214ENST00000552862 NUTM2GQ5VZR2 741 aa17.78■□□□□ 0.44
CDK4-214ENST00000552862 L3MBTL2Q969R5 705 aa17.78■□□□□ 0.44
CDK4-214ENST00000552862 CABP2Q9NPB3 220 aa17.78■□□□□ 0.44
CDK4-214ENST00000552862 AATKQ6ZMQ8 1374 aa17.78■□□□□ 0.44
CDK4-214ENST00000552862 BRWD3Q6RI45 1802 aa17.77■□□□□ 0.44
CDK4-214ENST00000552862 SRCAPQ6ZRS2 3230 aa17.77■□□□□ 0.44
CDK4-214ENST00000552862 SSH2Q76I76 1423 aa17.77■□□□□ 0.44
CDK4-214ENST00000552862 NRAPQ86VF7 1730 aa17.76■□□□□ 0.43
CDK4-214ENST00000552862 TRIM37O94972 964 aa17.76■□□□□ 0.43
CDK4-214ENST00000552862 ROCK2O75116 1388 aaKnown RBP17.76■□□□□ 0.43
CDK4-214ENST00000552862 RGPD1P0DJD0 1748 aa17.75■□□□□ 0.43
CDK4-214ENST00000552862 DDB1Q16531 1140 aa17.74■□□□□ 0.43
CDK4-214ENST00000552862 LARP1Q6PKG0 1096 aaKnown RBP17.74■□□□□ 0.43
CDK4-214ENST00000552862 TOM1L2Q6ZVM7 507 aa17.74■□□□□ 0.43
CDK4-214ENST00000552862 PUS7Q96PZ0 661 aaKnown RBP17.74■□□□□ 0.43
CDK4-214ENST00000552862 CAMKK2Q96RR4 588 aa17.74■□□□□ 0.43
CDK4-214ENST00000552862 CRB1P82279 1406 aa17.73■□□□□ 0.43
CDK4-214ENST00000552862 HMGB2P26583 209 aaKnown RBP17.73■□□□□ 0.43
CDK4-214ENST00000552862 USP6P35125 1406 aa17.72■□□□□ 0.43
CDK4-214ENST00000552862 PLSCR1O15162 318 aa17.72■□□□□ 0.43
CDK4-214ENST00000552862 THSD7AQ9UPZ6 1657 aa17.71■□□□□ 0.42
CDK4-214ENST00000552862 CSB-PGBD3P0DP91 1061 aa17.7■□□□□ 0.42
CDK4-214ENST00000552862 NEUROD1Q13562 356 aa17.7■□□□□ 0.42
CDK4-214ENST00000552862 R3HDM1Q15032 1099 aaKnown RBP17.7■□□□□ 0.42
CDK4-214ENST00000552862 EZH2Q15910 746 aaKnown RBP17.7■□□□□ 0.42
CDK4-214ENST00000552862 HDGFL2Q7Z4V5 671 aaPredicted RBP17.7■□□□□ 0.42
CDK4-214ENST00000552862 TERF2IPQ9NYB0 399 aa17.7■□□□□ 0.42
CDK4-214ENST00000552862 PSDA5PKW4 1024 aaPredicted RBP17.69■□□□□ 0.42
CDK4-214ENST00000552862 EXOC5O00471 708 aa17.69■□□□□ 0.42
CDK4-214ENST00000552862 WDR17Q8IZU2 1322 aa17.69■□□□□ 0.42
CDK4-214ENST00000552862 SBNO2Q9Y2G9 1366 aa17.68■□□□□ 0.42
CDK4-214ENST00000552862 TOPAZ1Q8N9V7 1692 aa17.68■□□□□ 0.42
CDK4-214ENST00000552862 OVOS2A0A0G2JMS6 1433 aa17.68■□□□□ 0.42
CDK4-214ENST00000552862 OVOS2A0A0J9YW53 1432 aa17.68■□□□□ 0.42
CDK4-214ENST00000552862 ZBTB7CA1YPR0 619 aa17.68■□□□□ 0.42
CDK4-214ENST00000552862 FAM182BQ5T319 152 aa17.68■□□□□ 0.42
CDK4-214ENST00000552862 OVOS2Q6IE36 1432 aa17.68■□□□□ 0.42
CDK4-214ENST00000552862 CARD10Q9BWT7 1032 aa17.68■□□□□ 0.42
CDK4-214ENST00000552862 BCL11BQ9C0K0 894 aaPredicted RBP17.68■□□□□ 0.42
CDK4-214ENST00000552862 LRP5O75197 1615 aa17.68■□□□□ 0.42
CDK4-214ENST00000552862 TTC21BQ7Z4L5 1316 aa17.68■□□□□ 0.42
CDK4-214ENST00000552862 CRYBG1Q9Y4K1 1723 aa17.67■□□□□ 0.42
CDK4-214ENST00000552862 ARHGEF25Q86VW2 580 aa17.67■□□□□ 0.42
CDK4-214ENST00000552862 PHRF1Q9P1Y6 1649 aaKnown RBP17.67■□□□□ 0.42
CDK4-214ENST00000552862 CAMTA1Q9Y6Y1 1673 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms