RNA–Protein interactions for RNA: ENST00000552645.5

LETMD1-234, Transcript of LETM1 domain containing 1, humanhuman

TSL 1 (best)

Gene LETMD1, Length 1,623 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-234ENST00000552645 KTN1Q86UP2 1357 aaKnown RBP13.79□□□□□ -0.2
LETMD1-234ENST00000552645 HAP1P54257 671 aaPredicted RBP13.79□□□□□ -0.2
LETMD1-234ENST00000552645 HDGFL2Q7Z4V5 671 aaPredicted RBP13.79□□□□□ -0.2
LETMD1-234ENST00000552645 PUS7Q96PZ0 661 aaKnown RBP13.79□□□□□ -0.2
LETMD1-234ENST00000552645 MED1Q15648 1581 aaPredicted RBP13.78□□□□□ -0.2
LETMD1-234ENST00000552645 SPATA31A6Q5VVP1 1343 aa13.78□□□□□ -0.2
LETMD1-234ENST00000552645 ALS2Q96Q42 1657 aa13.78□□□□□ -0.2
LETMD1-234ENST00000552645 CABLES1Q8TDN4 633 aa13.78□□□□□ -0.2
LETMD1-234ENST00000552645 TERF2IPQ9NYB0 399 aa13.78□□□□□ -0.2
LETMD1-234ENST00000552645 USP6P35125 1406 aa13.77□□□□□ -0.2
LETMD1-234ENST00000552645 ARHGEF10O15013 1369 aa13.77□□□□□ -0.2
LETMD1-234ENST00000552645 ADAMTS2O95450 1211 aa13.77□□□□□ -0.21
LETMD1-234ENST00000552645 ABTB2Q8N961 1025 aa13.77□□□□□ -0.21
LETMD1-234ENST00000552645 ZNF692Q9BU19 519 aaPredicted RBP13.77□□□□□ -0.21
LETMD1-234ENST00000552645 MON2Q7Z3U7 1717 aa13.77□□□□□ -0.21
LETMD1-234ENST00000552645 MYOM1P52179 1685 aa13.77□□□□□ -0.21
LETMD1-234ENST00000552645 COL22A1Q8NFW1 1626 aaPredicted RBP13.77□□□□□ -0.21
LETMD1-234ENST00000552645 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.76□□□□□ -0.21
LETMD1-234ENST00000552645 NINLQ9Y2I6 1382 aa13.76□□□□□ -0.21
LETMD1-234ENST00000552645 C11orf95C9JLR9 678 aaPredicted RBP13.75□□□□□ -0.21
LETMD1-234ENST00000552645 PHF23Q9BUL5 403 aaPredicted RBP13.75□□□□□ -0.21
LETMD1-234ENST00000552645 LRP6O75581 1613 aa13.75□□□□□ -0.21
LETMD1-234ENST00000552645 A0A1W2PP64 1363 aa13.75□□□□□ -0.21
LETMD1-234ENST00000552645 CD163L1Q9NR16 1453 aa13.75□□□□□ -0.21
LETMD1-234ENST00000552645 CPSF1Q10570 1443 aaKnown RBP13.75□□□□□ -0.21
LETMD1-234ENST00000552645 ABCA3Q99758 1704 aa13.74□□□□□ -0.21
LETMD1-234ENST00000552645 NRKQ7Z2Y5 1582 aa13.73□□□□□ -0.21
LETMD1-234ENST00000552645 C8orf37Q96NL8 207 aa13.73□□□□□ -0.21
LETMD1-234ENST00000552645 TTC21BQ7Z4L5 1316 aa13.73□□□□□ -0.21
LETMD1-234ENST00000552645 PIK3C2AO00443 1686 aa13.72□□□□□ -0.21
LETMD1-234ENST00000552645 NLRP6P59044 892 aa13.72□□□□□ -0.21
LETMD1-234ENST00000552645 ANKRD36BQ8N2N9 1353 aa13.72□□□□□ -0.21
LETMD1-234ENST00000552645 MARF1Q9Y4F3 1742 aaKnown RBP13.72□□□□□ -0.21
LETMD1-234ENST00000552645 KIF7Q2M1P5 1343 aa13.72□□□□□ -0.21
LETMD1-234ENST00000552645 SOX12O15370 315 aa13.71□□□□□ -0.22
LETMD1-234ENST00000552645 NLRP13Q86W25 1043 aa13.71□□□□□ -0.22
LETMD1-234ENST00000552645 NGLY1Q96IV0 654 aa13.71□□□□□ -0.22
LETMD1-234ENST00000552645 BRD4O60885 1362 aaPredicted RBP13.71□□□□□ -0.22
LETMD1-234ENST00000552645 EDC4Q6P2E9 1401 aaKnown RBP13.7□□□□□ -0.22
LETMD1-234ENST00000552645 SSH2Q76I76 1423 aa13.7□□□□□ -0.22
LETMD1-234ENST00000552645 TTC21AQ8NDW8 1320 aa13.7□□□□□ -0.22
LETMD1-234ENST00000552645 NME9Q86XW9 330 aa13.7□□□□□ -0.22
LETMD1-234ENST00000552645 ZRANB1Q9UGI0 708 aa13.7□□□□□ -0.22
LETMD1-234ENST00000552645 CRYBG1Q9Y4K1 1723 aa13.7□□□□□ -0.22
LETMD1-234ENST00000552645 PHRF1Q9P1Y6 1649 aaKnown RBP13.7□□□□□ -0.22
LETMD1-234ENST00000552645 ZBTB7CA1YPR0 619 aa13.69□□□□□ -0.22
LETMD1-234ENST00000552645 CCDC7Q96M83 1385 aa13.68□□□□□ -0.22
LETMD1-234ENST00000552645 ZC3H6P61129 1189 aaKnown RBP13.68□□□□□ -0.22
LETMD1-234ENST00000552645 PANK3Q9H999 370 aa13.68□□□□□ -0.22
LETMD1-234ENST00000552645 NSD3Q9BZ95 1437 aa13.68□□□□□ -0.22
LETMD1-234ENST00000552645 WASHC2AQ641Q2 1341 aa13.67□□□□□ -0.22
LETMD1-234ENST00000552645 KIF20BQ96Q89 1820 aa13.67□□□□□ -0.22
LETMD1-234ENST00000552645 CARD14Q9BXL6 1004 aa13.67□□□□□ -0.22
LETMD1-234ENST00000552645 AFF2P51816 1311 aa13.67□□□□□ -0.22
LETMD1-234ENST00000552645 PRDM11Q9NQV5 511 aa13.66□□□□□ -0.22
LETMD1-234ENST00000552645 GCP02774 474 aa13.65□□□□□ -0.22
LETMD1-234ENST00000552645 USP19O94966 1318 aa13.65□□□□□ -0.22
LETMD1-234ENST00000552645 CHRNA2Q15822 529 aa13.64□□□□□ -0.23
LETMD1-234ENST00000552645 GGNBP2Q9H3C7 697 aa13.64□□□□□ -0.23
LETMD1-234ENST00000552645 KIAA0232Q92628 1395 aa13.64□□□□□ -0.23
LETMD1-234ENST00000552645 PLCH1Q4KWH8 1693 aa13.64□□□□□ -0.23
LETMD1-234ENST00000552645 FAM83GA6ND36 823 aa13.64□□□□□ -0.23
LETMD1-234ENST00000552645 COG3Q96JB2 828 aa13.64□□□□□ -0.23
LETMD1-234ENST00000552645 BCL11AQ9H165 835 aa13.64□□□□□ -0.23
LETMD1-234ENST00000552645 USP21Q9UK80 565 aa13.64□□□□□ -0.23
LETMD1-234ENST00000552645 RGS17Q9UGC6 210 aaPredicted RBP13.63□□□□□ -0.23
LETMD1-234ENST00000552645 SLIT3O75094 1523 aa13.62□□□□□ -0.23
LETMD1-234ENST00000552645 COL14A1Q05707 1796 aaKnown RBP13.62□□□□□ -0.23
LETMD1-234ENST00000552645 FYB1O15117 783 aa13.62□□□□□ -0.23
LETMD1-234ENST00000552645 CNGB1Q14028 1251 aaPredicted RBP13.62□□□□□ -0.23
LETMD1-234ENST00000552645 KCNH5Q8NCM2 988 aa13.62□□□□□ -0.23
LETMD1-234ENST00000552645 CGNL1Q0VF96 1302 aa13.62□□□□□ -0.23
LETMD1-234ENST00000552645 ZNF316A6NFI3 1004 aaPredicted RBP13.61□□□□□ -0.23
LETMD1-234ENST00000552645 ZNF772Q68DY9 489 aaPredicted RBP13.61□□□□□ -0.23
LETMD1-234ENST00000552645 KNSTRNQ9Y448 316 aa13.61□□□□□ -0.23
LETMD1-234ENST00000552645 USP31Q70CQ4 1352 aa13.61□□□□□ -0.23
LETMD1-234ENST00000552645 USP54Q70EL1 1684 aa13.61□□□□□ -0.23
LETMD1-234ENST00000552645 LTN1O94822 1766 aa13.61□□□□□ -0.23
LETMD1-234ENST00000552645 BTG4Q9NY30 223 aa13.61□□□□□ -0.23
LETMD1-234ENST00000552645 NWD2Q9ULI1 1742 aa13.6□□□□□ -0.23
LETMD1-234ENST00000552645 OVOS2A0A0J9YW53 1432 aa13.6□□□□□ -0.23
LETMD1-234ENST00000552645 OVOS2Q6IE36 1432 aa13.6□□□□□ -0.23
LETMD1-234ENST00000552645 POTEAQ6S8J7 498 aa13.6□□□□□ -0.23
LETMD1-234ENST00000552645 FNBP4Q8N3X1 1017 aaPredicted RBP13.6□□□□□ -0.23
LETMD1-234ENST00000552645 ANP32EQ9BTT0 268 aa13.6□□□□□ -0.23
LETMD1-234ENST00000552645 CCDC9Q9Y3X0 531 aaKnown RBP13.6□□□□□ -0.23
LETMD1-234ENST00000552645 RGPD5Q99666 1765 aa13.59□□□□□ -0.23
LETMD1-234ENST00000552645 FBLN1P23142 703 aa13.59□□□□□ -0.23
LETMD1-234ENST00000552645 QTRT2Q9H974 415 aaKnown RBP13.59□□□□□ -0.23
LETMD1-234ENST00000552645 STRN4Q9NRL3 753 aa13.59□□□□□ -0.23
LETMD1-234ENST00000552645 NFAT5O94916 1531 aa13.59□□□□□ -0.23
LETMD1-234ENST00000552645 TNNT2P45379 298 aaPredicted RBP13.58□□□□□ -0.24
LETMD1-234ENST00000552645 EVA1CP58658 441 aa13.58□□□□□ -0.24
LETMD1-234ENST00000552645 UNC5CLQ8IV45 518 aa13.58□□□□□ -0.24
LETMD1-234ENST00000552645 SLIT2O94813 1529 aa13.58□□□□□ -0.24
LETMD1-234ENST00000552645 BCL9LQ86UU0 1499 aa13.58□□□□□ -0.24
LETMD1-234ENST00000552645 ANKRD26Q9UPS8 1709 aa13.58□□□□□ -0.24
LETMD1-234ENST00000552645 CPDO75976 1380 aa13.58□□□□□ -0.24
LETMD1-234ENST00000552645 ARHGEF25Q86VW2 580 aa13.57□□□□□ -0.24
LETMD1-234ENST00000552645 TRPC5Q9UL62 973 aaPredicted RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms