RNA–Protein interactions for RNA: ENST00000552341.5

PFDN5-216, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 1,980 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-216ENST00000552341 PNPLA6Q8IY17 1366 aa14.41□□□□□ -0.1
PFDN5-216ENST00000552341 CCDC146Q8IYE0 955 aa14.41□□□□□ -0.1
PFDN5-216ENST00000552341 ACEP12821 1306 aa14.41□□□□□ -0.1
PFDN5-216ENST00000552341 NALCNQ8IZF0 1738 aa14.4□□□□□ -0.1
PFDN5-216ENST00000552341 FMN2Q9NZ56 1722 aa14.4□□□□□ -0.1
PFDN5-216ENST00000552341 NUTM2FA1L443 756 aa14.4□□□□□ -0.1
PFDN5-216ENST00000552341 NME9Q86XW9 330 aa14.4□□□□□ -0.1
PFDN5-216ENST00000552341 CFAP53Q96M91 514 aa14.4□□□□□ -0.1
PFDN5-216ENST00000552341 SSH2Q76I76 1423 aa14.39□□□□□ -0.11
PFDN5-216ENST00000552341 MAP2P11137 1827 aaKnown RBP14.39□□□□□ -0.11
PFDN5-216ENST00000552341 APAF1O14727 1248 aa14.39□□□□□ -0.11
PFDN5-216ENST00000552341 ZRANB1Q9UGI0 708 aa14.39□□□□□ -0.11
PFDN5-216ENST00000552341 USP6P35125 1406 aa14.38□□□□□ -0.11
PFDN5-216ENST00000552341 FBLN1P23142 703 aa14.38□□□□□ -0.11
PFDN5-216ENST00000552341 ANKARQ7Z5J8 1434 aa14.38□□□□□ -0.11
PFDN5-216ENST00000552341 IQSEC2Q5JU85 1478 aa14.38□□□□□ -0.11
PFDN5-216ENST00000552341 NWD1Q149M9 1564 aa14.37□□□□□ -0.11
PFDN5-216ENST00000552341 POLKQ9UBT6 870 aa14.37□□□□□ -0.11
PFDN5-216ENST00000552341 TTC21BQ7Z4L5 1316 aa14.37□□□□□ -0.11
PFDN5-216ENST00000552341 AATKQ6ZMQ8 1374 aa14.37□□□□□ -0.11
PFDN5-216ENST00000552341 IRX6P78412 446 aaPredicted RBP14.36□□□□□ -0.11
PFDN5-216ENST00000552341 NGEFQ8N5V2 710 aa14.36□□□□□ -0.11
PFDN5-216ENST00000552341 RUNDC1Q96C34 613 aa14.35□□□□□ -0.11
PFDN5-216ENST00000552341 OVOS2A0A0J9YW53 1432 aa14.34□□□□□ -0.11
PFDN5-216ENST00000552341 OVOS2Q6IE36 1432 aa14.34□□□□□ -0.11
PFDN5-216ENST00000552341 TRMT2AQ8IZ69 625 aaKnown RBP14.34□□□□□ -0.11
PFDN5-216ENST00000552341 COG3Q96JB2 828 aa14.34□□□□□ -0.11
PFDN5-216ENST00000552341 ADGRL3Q9HAR2 1447 aa14.34□□□□□ -0.11
PFDN5-216ENST00000552341 DUSP27Q5VZP5 1158 aa14.33□□□□□ -0.12
PFDN5-216ENST00000552341 ERICH6BQ5W0A0 696 aa14.33□□□□□ -0.12
PFDN5-216ENST00000552341 PMFBP1Q8TBY8 1022 aa14.33□□□□□ -0.12
PFDN5-216ENST00000552341 GOLGA2Q08379 1002 aa14.33□□□□□ -0.12
PFDN5-216ENST00000552341 SLFN5Q08AF3 891 aa14.33□□□□□ -0.12
PFDN5-216ENST00000552341 CDK12Q9NYV4 1490 aaPredicted RBP14.32□□□□□ -0.12
PFDN5-216ENST00000552341 U2AF1L5P0DN76 240 aaPredicted RBP14.32□□□□□ -0.12
PFDN5-216ENST00000552341 U2AF1Q01081 240 aaKnown RBP eCLIP14.32□□□□□ -0.12
PFDN5-216ENST00000552341 TCP11L2Q8N4U5 519 aa14.32□□□□□ -0.12
PFDN5-216ENST00000552341 RBM33Q96EV2 1170 aaKnown RBP14.32□□□□□ -0.12
PFDN5-216ENST00000552341 PLEKHF1Q96S99 279 aa14.32□□□□□ -0.12
PFDN5-216ENST00000552341 EMILIN1Q9Y6C2 1016 aa14.32□□□□□ -0.12
PFDN5-216ENST00000552341 KDM4FA0A1W2PPD8 638 aa14.31□□□□□ -0.12
PFDN5-216ENST00000552341 DIAPH1O60610 1272 aaKnown RBP14.31□□□□□ -0.12
PFDN5-216ENST00000552341 NCBP3Q53F19 620 aaKnown RBP14.31□□□□□ -0.12
PFDN5-216ENST00000552341 SPINK5Q9NQ38 1064 aaPredicted RBP14.31□□□□□ -0.12
PFDN5-216ENST00000552341 RCAN3Q9UKA8 241 aa14.31□□□□□ -0.12
PFDN5-216ENST00000552341 DMRT2Q9Y5R5 561 aa14.31□□□□□ -0.12
PFDN5-216ENST00000552341 USP31Q70CQ4 1352 aa14.31□□□□□ -0.12
PFDN5-216ENST00000552341 TTC21AQ8NDW8 1320 aa14.31□□□□□ -0.12
PFDN5-216ENST00000552341 WWC1Q8IX03 1113 aa14.31□□□□□ -0.12
PFDN5-216ENST00000552341 PIK3C2AO00443 1686 aa14.3□□□□□ -0.12
PFDN5-216ENST00000552341 NGDNQ8NEJ9 315 aaKnown RBP14.29□□□□□ -0.12
PFDN5-216ENST00000552341 CCDC27Q2M243 656 aa14.29□□□□□ -0.12
PFDN5-216ENST00000552341 MARF1Q9Y4F3 1742 aaKnown RBP14.29□□□□□ -0.12
PFDN5-216ENST00000552341 U2SURPO15042 1029 aaKnown RBP14.28□□□□□ -0.12
PFDN5-216ENST00000552341 RRS1Q15050 365 aaKnown RBP14.28□□□□□ -0.12
PFDN5-216ENST00000552341 STRCP1A6NGW2 1772 aa14.28□□□□□ -0.12
PFDN5-216ENST00000552341 USP54Q70EL1 1684 aa14.28□□□□□ -0.12
PFDN5-216ENST00000552341 PPM1GO15355 546 aaPredicted RBP14.27□□□□□ -0.12
PFDN5-216ENST00000552341 RRP7AQ9Y3A4 280 aaKnown RBP14.27□□□□□ -0.12
PFDN5-216ENST00000552341 IL13P35225 146 aa14.27□□□□□ -0.13
PFDN5-216ENST00000552341 RRP1P56182 461 aaKnown RBP14.27□□□□□ -0.13
PFDN5-216ENST00000552341 PEAK1Q9H792 1746 aa14.27□□□□□ -0.13
PFDN5-216ENST00000552341 LRRC7Q96NW7 1537 aa14.27□□□□□ -0.13
PFDN5-216ENST00000552341 E9PSI1 815 aa14.26□□□□□ -0.13
PFDN5-216ENST00000552341 FCHSD2O94868 740 aa14.25□□□□□ -0.13
PFDN5-216ENST00000552341 NEUROD2Q15784 382 aa14.25□□□□□ -0.13
PFDN5-216ENST00000552341 RSPH6AQ9H0K4 717 aa14.25□□□□□ -0.13
PFDN5-216ENST00000552341 LMTK3Q96Q04 1460 aa14.25□□□□□ -0.13
PFDN5-216ENST00000552341 HSPA2P54652 639 aa14.25□□□□□ -0.13
PFDN5-216ENST00000552341 PHF8Q9UPP1 1060 aa14.25□□□□□ -0.13
PFDN5-216ENST00000552341 WDR63Q8IWG1 891 aa14.24□□□□□ -0.13
PFDN5-216ENST00000552341 PPP4R2Q9NY27 417 aa14.24□□□□□ -0.13
PFDN5-216ENST00000552341 TMPOP42166 694 aaKnown RBP14.23□□□□□ -0.13
PFDN5-216ENST00000552341 STRCQ7RTU9 1775 aa14.23□□□□□ -0.13
PFDN5-216ENST00000552341 PROSER2Q86WR7 435 aaPredicted RBP14.23□□□□□ -0.13
PFDN5-216ENST00000552341 TRIM35Q9UPQ4 493 aa14.22□□□□□ -0.13
PFDN5-216ENST00000552341 RGPD1P0DJD0 1748 aa14.21□□□□□ -0.13
PFDN5-216ENST00000552341 PNNQ9H307 717 aaKnown RBP14.21□□□□□ -0.13
PFDN5-216ENST00000552341 PRKAR2BP31323 418 aa14.2□□□□□ -0.14
PFDN5-216ENST00000552341 EIF4A2Q14240 407 aaKnown RBP14.2□□□□□ -0.14
PFDN5-216ENST00000552341 ESCO1Q5FWF5 840 aa14.2□□□□□ -0.14
PFDN5-216ENST00000552341 C19orf44Q9H6X5 657 aa14.2□□□□□ -0.14
PFDN5-216ENST00000552341 MAP3K19Q56UN5 1328 aa14.2□□□□□ -0.14
PFDN5-216ENST00000552341 C14orf37Q86TY3 774 aa14.2□□□□□ -0.14
PFDN5-216ENST00000552341 PHACTR3Q96KR7 559 aa14.2□□□□□ -0.14
PFDN5-216ENST00000552341 MAPK8IP3Q9UPT6 1336 aa14.19□□□□□ -0.14
PFDN5-216ENST00000552341 NCOA3Q9Y6Q9 1424 aa14.19□□□□□ -0.14
PFDN5-216ENST00000552341 HMOX1P09601 288 aa14.19□□□□□ -0.14
PFDN5-216ENST00000552341 NLRP6P59044 892 aa14.19□□□□□ -0.14
PFDN5-216ENST00000552341 HSP90AB2PQ58FF8 381 aa14.19□□□□□ -0.14
PFDN5-216ENST00000552341 ORAI2Q96SN7 254 aa14.19□□□□□ -0.14
PFDN5-216ENST00000552341 C1orf167Q5SNV9 1468 aa14.19□□□□□ -0.14
PFDN5-216ENST00000552341 PLIN1O60240 522 aa14.18□□□□□ -0.14
PFDN5-216ENST00000552341 ANP32EQ9BTT0 268 aa14.18□□□□□ -0.14
PFDN5-216ENST00000552341 TMEM94Q12767 1356 aa14.18□□□□□ -0.14
PFDN5-216ENST00000552341 ABTB2Q8N961 1025 aa14.18□□□□□ -0.14
PFDN5-216ENST00000552341 SBNO1A3KN83 1393 aa14.18□□□□□ -0.14
PFDN5-216ENST00000552341 RIPK4P57078 832 aa14.17□□□□□ -0.14
PFDN5-216ENST00000552341 FLT4P35916 1363 aa14.17□□□□□ -0.14
PFDN5-216ENST00000552341 DCCP43146 1447 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms