RNA–Protein interactions for RNA: ENST00000552215.5

CHPT1-208, Transcript of choline phosphotransferase 1, humanhuman

TSL 1 (best)

Gene CHPT1, Length 4,342 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-208ENST00000552215 CAMSAP1Q5T5Y3 1602 aa10.64□□□□□ -0.71
CHPT1-208ENST00000552215 TOM1O60784 492 aa10.64□□□□□ -0.71
CHPT1-208ENST00000552215 PLEKHG1Q9ULL1 1385 aa10.64□□□□□ -0.71
CHPT1-208ENST00000552215 EIF2S2P20042 333 aaKnown RBP10.64□□□□□ -0.71
CHPT1-208ENST00000552215 ABCC11Q96J66 1382 aa10.63□□□□□ -0.71
CHPT1-208ENST00000552215 RAPGEF4Q8WZA2 1011 aa10.63□□□□□ -0.71
CHPT1-208ENST00000552215 FAM83GA6ND36 823 aa10.63□□□□□ -0.71
CHPT1-208ENST00000552215 NPM2Q86SE8 214 aaKnown RBP10.63□□□□□ -0.71
CHPT1-208ENST00000552215 MCM10Q7L590 875 aa10.62□□□□□ -0.71
CHPT1-208ENST00000552215 KIF1BO60333 1816 aa10.62□□□□□ -0.71
CHPT1-208ENST00000552215 SPHKAPQ2M3C7 1700 aa10.62□□□□□ -0.71
CHPT1-208ENST00000552215 POLKQ9UBT6 870 aa10.62□□□□□ -0.71
CHPT1-208ENST00000552215 GCP02774 474 aa10.62□□□□□ -0.71
CHPT1-208ENST00000552215 NLRP1Q9C000 1473 aa10.62□□□□□ -0.71
CHPT1-208ENST00000552215 GOLGA2Q08379 1002 aa10.62□□□□□ -0.71
CHPT1-208ENST00000552215 SYNMO15061 1565 aa10.62□□□□□ -0.71
CHPT1-208ENST00000552215 PIK3C2BO00750 1634 aa10.61□□□□□ -0.71
CHPT1-208ENST00000552215 MROH1Q8NDA8 1641 aa10.61□□□□□ -0.71
CHPT1-208ENST00000552215 B4GALNT3Q6L9W6 998 aa10.61□□□□□ -0.71
CHPT1-208ENST00000552215 PELP1Q8IZL8 1130 aaKnown RBP10.61□□□□□ -0.71
CHPT1-208ENST00000552215 ZMYM4Q5VZL5 1548 aa10.61□□□□□ -0.71
CHPT1-208ENST00000552215 C1orf141Q5JVX7 400 aa10.6□□□□□ -0.71
CHPT1-208ENST00000552215 AGLP35573 1532 aa10.6□□□□□ -0.71
CHPT1-208ENST00000552215 TEFQ10587 303 aa10.6□□□□□ -0.71
CHPT1-208ENST00000552215 MAP3K19Q56UN5 1328 aa10.59□□□□□ -0.71
CHPT1-208ENST00000552215 NPHP3Q7Z494 1330 aa10.59□□□□□ -0.71
CHPT1-208ENST00000552215 APBB1O00213 710 aa10.59□□□□□ -0.71
CHPT1-208ENST00000552215 SLC4A10Q6U841 1118 aa10.59□□□□□ -0.71
CHPT1-208ENST00000552215 MPRIPQ6WCQ1 1025 aa10.59□□□□□ -0.71
CHPT1-208ENST00000552215 RUNDC1Q96C34 613 aa10.59□□□□□ -0.71
CHPT1-208ENST00000552215 CCDC136Q96JN2 1154 aa10.59□□□□□ -0.71
CHPT1-208ENST00000552215 FTSJ3Q8IY81 847 aaKnown RBP10.58□□□□□ -0.72
CHPT1-208ENST00000552215 ANKRD36BQ8N2N9 1353 aa10.58□□□□□ -0.72
CHPT1-208ENST00000552215 FAM182BQ5T319 152 aa10.58□□□□□ -0.72
CHPT1-208ENST00000552215 ZNF530Q6P9A1 599 aaPredicted RBP10.58□□□□□ -0.72
CHPT1-208ENST00000552215 ANKRD24Q8TF21 1146 aa10.58□□□□□ -0.72
CHPT1-208ENST00000552215 PTPRUQ92729 1446 aa10.58□□□□□ -0.72
CHPT1-208ENST00000552215 PHACTR3Q96KR7 559 aa10.57□□□□□ -0.72
CHPT1-208ENST00000552215 PNNQ9H307 717 aaKnown RBP10.57□□□□□ -0.72
CHPT1-208ENST00000552215 RCAN3Q9UKA8 241 aa10.57□□□□□ -0.72
CHPT1-208ENST00000552215 ALKQ9UM73 1620 aa10.57□□□□□ -0.72
CHPT1-208ENST00000552215 BRINP3Q76B58 766 aa10.57□□□□□ -0.72
CHPT1-208ENST00000552215 EIF2AK4Q9P2K8 1649 aaKnown RBP10.57□□□□□ -0.72
CHPT1-208ENST00000552215 ADAMTS13Q76LX8 1427 aa10.57□□□□□ -0.72
CHPT1-208ENST00000552215 SMC4Q9NTJ3 1288 aa10.57□□□□□ -0.72
CHPT1-208ENST00000552215 BTG4Q9NY30 223 aa10.57□□□□□ -0.72
CHPT1-208ENST00000552215 EIF4A2Q14240 407 aaKnown RBP10.56□□□□□ -0.72
CHPT1-208ENST00000552215 SETD1BQ9UPS6 1966 aaKnown RBP10.56□□□□□ -0.72
CHPT1-208ENST00000552215 PTCD1O75127 700 aaKnown RBP10.56□□□□□ -0.72
CHPT1-208ENST00000552215 LMTK2Q8IWU2 1503 aa10.56□□□□□ -0.72
CHPT1-208ENST00000552215 ADGRB3O60242 1522 aa10.56□□□□□ -0.72
CHPT1-208ENST00000552215 PREX1Q8TCU6 1659 aa10.55□□□□□ -0.72
CHPT1-208ENST00000552215 AIMP1Q12904 312 aaKnown RBP10.55□□□□□ -0.72
CHPT1-208ENST00000552215 FER1L4A9Z1Z3 1794 aa10.55□□□□□ -0.72
CHPT1-208ENST00000552215 TSPYL4Q9UJ04 414 aa10.55□□□□□ -0.72
CHPT1-208ENST00000552215 BRD4O60885 1362 aaPredicted RBP10.55□□□□□ -0.72
CHPT1-208ENST00000552215 KCNH5Q8NCM2 988 aa10.54□□□□□ -0.72
CHPT1-208ENST00000552215 RBM42Q9BTD8 480 aaKnown RBP10.54□□□□□ -0.72
CHPT1-208ENST00000552215 NPHP1O15259 732 aa10.54□□□□□ -0.72
CHPT1-208ENST00000552215 ACSBG1Q96GR2 724 aa10.54□□□□□ -0.72
CHPT1-208ENST00000552215 EYA1Q99502 592 aa10.54□□□□□ -0.72
CHPT1-208ENST00000552215 RTL5Q5HYW3 569 aaPredicted RBP10.54□□□□□ -0.72
CHPT1-208ENST00000552215 NEXMIFQ5QGS0 1516 aa10.53□□□□□ -0.72
CHPT1-208ENST00000552215 PIP4K2AP48426 406 aaPredicted RBP10.53□□□□□ -0.72
CHPT1-208ENST00000552215 MYOM2P54296 1465 aa10.53□□□□□ -0.72
CHPT1-208ENST00000552215 SIGLEC1Q9BZZ2 1709 aa10.53□□□□□ -0.72
CHPT1-208ENST00000552215 TATP17735 454 aaPredicted RBP10.53□□□□□ -0.72
CHPT1-208ENST00000552215 EXOSC9Q06265 439 aaKnown RBP10.53□□□□□ -0.72
CHPT1-208ENST00000552215 PLEKHG3A1L390 1219 aa10.53□□□□□ -0.72
CHPT1-208ENST00000552215 MSH5O43196 834 aa10.53□□□□□ -0.72
CHPT1-208ENST00000552215 TMPOP42166 694 aaKnown RBP10.53□□□□□ -0.72
CHPT1-208ENST00000552215 KRT24Q2M2I5 525 aa10.53□□□□□ -0.72
CHPT1-208ENST00000552215 ZBTB47Q9UFB7 747 aaPredicted RBP10.53□□□□□ -0.72
CHPT1-208ENST00000552215 MROH2AA6NES4 1674 aa10.53□□□□□ -0.72
CHPT1-208ENST00000552215 FAM177BA6PVY3 158 aa10.52□□□□□ -0.72
CHPT1-208ENST00000552215 BCAR3O75815 825 aa10.52□□□□□ -0.72
CHPT1-208ENST00000552215 ZFYVE9O95405 1425 aa10.52□□□□□ -0.72
CHPT1-208ENST00000552215 VWDEQ8N2E2 1590 aa10.52□□□□□ -0.73
CHPT1-208ENST00000552215 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.52□□□□□ -0.73
CHPT1-208ENST00000552215 MYH16Q9H6N6 1097 aa10.52□□□□□ -0.73
CHPT1-208ENST00000552215 ANXA1P04083 346 aa10.51□□□□□ -0.73
CHPT1-208ENST00000552215 HOXC9P31274 260 aa10.51□□□□□ -0.73
CHPT1-208ENST00000552215 SLC39A6Q13433 755 aa10.51□□□□□ -0.73
CHPT1-208ENST00000552215 NBPF6Q5VWK0 638 aa10.51□□□□□ -0.73
CHPT1-208ENST00000552215 NBPF4Q96M43 638 aa10.51□□□□□ -0.73
CHPT1-208ENST00000552215 BCORL1Q5H9F3 1711 aa10.51□□□□□ -0.73
CHPT1-208ENST00000552215 CEP170BQ9Y4F5 1589 aaPredicted RBP10.51□□□□□ -0.73
CHPT1-208ENST00000552215 ITPRIPQ8IWB1 547 aa10.51□□□□□ -0.73
CHPT1-208ENST00000552215 RGS3P49796 1198 aa10.5□□□□□ -0.73
CHPT1-208ENST00000552215 COG6Q9Y2V7 657 aa10.5□□□□□ -0.73
CHPT1-208ENST00000552215 WWC1Q8IX03 1113 aa10.5□□□□□ -0.73
CHPT1-208ENST00000552215 AXIN2Q9Y2T1 843 aa10.5□□□□□ -0.73
CHPT1-208ENST00000552215 PLEKHO1Q53GL0 409 aaPredicted RBP10.5□□□□□ -0.73
CHPT1-208ENST00000552215 TTC5Q8N0Z6 440 aa10.5□□□□□ -0.73
CHPT1-208ENST00000552215 MYO5BQ9ULV0 1848 aa10.5□□□□□ -0.73
CHPT1-208ENST00000552215 LARP1Q6PKG0 1096 aaKnown RBP10.49□□□□□ -0.73
CHPT1-208ENST00000552215 PANK1Q8TE04 598 aa10.49□□□□□ -0.73
CHPT1-208ENST00000552215 SPINK5Q9NQ38 1064 aaPredicted RBP10.49□□□□□ -0.73
CHPT1-208ENST00000552215 SPATA31D1Q6ZQQ2 1576 aa10.49□□□□□ -0.73
CHPT1-208ENST00000552215 ZBED9Q6R2W3 1325 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms