RNA–Protein interactions for RNA: ENST00000551557.1

TGIF1-220, Transcript of TGFB induced factor homeobox 1, humanhuman

TSL 3

Gene TGIF1, Length 319 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGIF1-220ENST00000551557 HAP1P54257 671 aaPredicted RBP28.3■■■□□ 2.12
TGIF1-220ENST00000551557 ATRNO75882 1429 aa28.29■■■□□ 2.12
TGIF1-220ENST00000551557 PLEKHG3A1L390 1219 aa28.29■■■□□ 2.12
TGIF1-220ENST00000551557 RBM6P78332 1123 aaKnown RBP28.29■■■□□ 2.12
TGIF1-220ENST00000551557 SLIT2O94813 1529 aa28.28■■■□□ 2.12
TGIF1-220ENST00000551557 CARD11Q9BXL7 1154 aa28.28■■■□□ 2.12
TGIF1-220ENST00000551557 RGS12O14924 1447 aa28.27■■■□□ 2.12
TGIF1-220ENST00000551557 NWD2Q9ULI1 1742 aa28.27■■■□□ 2.12
TGIF1-220ENST00000551557 TRPC5Q9UL62 973 aaPredicted RBP28.27■■■□□ 2.12
TGIF1-220ENST00000551557 PHRF1Q9P1Y6 1649 aaKnown RBP28.25■■■□□ 2.11
TGIF1-220ENST00000551557 EVC2Q86UK5 1308 aa28.25■■■□□ 2.11
TGIF1-220ENST00000551557 AKAP12Q02952 1782 aa28.21■■■□□ 2.11
TGIF1-220ENST00000551557 NRAPQ86VF7 1730 aa28.21■■■□□ 2.11
TGIF1-220ENST00000551557 COL14A1Q05707 1796 aaKnown RBP28.2■■■□□ 2.11
TGIF1-220ENST00000551557 UNC5CLQ8IV45 518 aa28.2■■■□□ 2.1
TGIF1-220ENST00000551557 CABP1Q9NZU7 370 aa28.2■■■□□ 2.1
TGIF1-220ENST00000551557 NUTM2GQ5VZR2 741 aa28.19■■■□□ 2.1
TGIF1-220ENST00000551557 GLI3P10071 1580 aa28.19■■■□□ 2.1
TGIF1-220ENST00000551557 FAM83GA6ND36 823 aa28.18■■■□□ 2.1
TGIF1-220ENST00000551557 SBNO2Q9Y2G9 1366 aa28.18■■■□□ 2.1
TGIF1-220ENST00000551557 GJD4Q96KN9 370 aaPredicted RBP28.14■■■□□ 2.1
TGIF1-220ENST00000551557 USP6P35125 1406 aa28.14■■■□□ 2.1
TGIF1-220ENST00000551557 NRKQ7Z2Y5 1582 aa28.13■■■□□ 2.09
TGIF1-220ENST00000551557 ABTB2Q8N961 1025 aa28.12■■■□□ 2.09
TGIF1-220ENST00000551557 BRWD3Q6RI45 1802 aa28.12■■■□□ 2.09
TGIF1-220ENST00000551557 PIK3C2AO00443 1686 aa28.11■■■□□ 2.09
TGIF1-220ENST00000551557 CLSPNQ9HAW4 1339 aa28.11■■■□□ 2.09
TGIF1-220ENST00000551557 EP400Q96L91 3159 aa28.11■■■□□ 2.09
TGIF1-220ENST00000551557 ATAD2Q6PL18 1390 aa28.1■■■□□ 2.09
TGIF1-220ENST00000551557 MON2Q7Z3U7 1717 aa28.09■■■□□ 2.09
TGIF1-220ENST00000551557 UPF1Q92900 1129 aaKnown RBP eCLIP28.09■■■□□ 2.09
TGIF1-220ENST00000551557 BTG4Q9NY30 223 aa28.09■■■□□ 2.09
TGIF1-220ENST00000551557 BRD4O60885 1362 aaPredicted RBP28.09■■■□□ 2.09
TGIF1-220ENST00000551557 SSH2Q76I76 1423 aa28.09■■■□□ 2.09
TGIF1-220ENST00000551557 VPS72Q15906 364 aa28.08■■■□□ 2.09
TGIF1-220ENST00000551557 KIAA0232Q92628 1395 aa28.08■■■□□ 2.09
TGIF1-220ENST00000551557 PRDM11Q9NQV5 511 aa28.07■■■□□ 2.08
TGIF1-220ENST00000551557 USP19O94966 1318 aa28.07■■■□□ 2.08
TGIF1-220ENST00000551557 ZC3H6P61129 1189 aaKnown RBP28.06■■■□□ 2.08
TGIF1-220ENST00000551557 ST20-MTHFSA0A0A6YYL1 179 aa28.05■■■□□ 2.08
TGIF1-220ENST00000551557 CPSF1Q10570 1443 aaKnown RBP28.04■■■□□ 2.08
TGIF1-220ENST00000551557 CHRNA2Q15822 529 aa28.04■■■□□ 2.08
TGIF1-220ENST00000551557 CCDC9Q9Y3X0 531 aaKnown RBP28.04■■■□□ 2.08
TGIF1-220ENST00000551557 NLRP13Q86W25 1043 aa28.03■■■□□ 2.08
TGIF1-220ENST00000551557 TESK2Q96S53 571 aa28.03■■■□□ 2.08
TGIF1-220ENST00000551557 ZNF692Q9BU19 519 aaPredicted RBP28.01■■■□□ 2.07
TGIF1-220ENST00000551557 TIMELESSQ9UNS1 1208 aa28.01■■■□□ 2.07
TGIF1-220ENST00000551557 CD163L1Q9NR16 1453 aa28.01■■■□□ 2.07
TGIF1-220ENST00000551557 LMO7Q8WWI1 1683 aa28■■■□□ 2.07
TGIF1-220ENST00000551557 SLIT3O75094 1523 aa28■■■□□ 2.07
TGIF1-220ENST00000551557 KTN1Q86UP2 1357 aaKnown RBP27.99■■■□□ 2.07
TGIF1-220ENST00000551557 USP47Q96K76 1375 aa27.99■■■□□ 2.07
TGIF1-220ENST00000551557 TTC21BQ7Z4L5 1316 aa27.99■■■□□ 2.07
TGIF1-220ENST00000551557 NLRP6P59044 892 aa27.99■■■□□ 2.07
TGIF1-220ENST00000551557 CCER1Q8TC90 406 aaPredicted RBP27.99■■■□□ 2.07
TGIF1-220ENST00000551557 GCP02774 474 aa27.98■■■□□ 2.07
TGIF1-220ENST00000551557 TMC1Q8TDI8 760 aa27.97■■■□□ 2.07
TGIF1-220ENST00000551557 CPDO75976 1380 aa27.97■■■□□ 2.07
TGIF1-220ENST00000551557 CAMTA1Q9Y6Y1 1673 aa27.97■■■□□ 2.07
TGIF1-220ENST00000551557 SEPT12Q8IYM1 358 aa27.95■■■□□ 2.06
TGIF1-220ENST00000551557 SLC12A5Q9H2X9 1139 aa27.95■■■□□ 2.06
TGIF1-220ENST00000551557 SPATA31A5Q5VU36 1347 aa27.93■■■□□ 2.06
TGIF1-220ENST00000551557 SPATA31A7Q8IWB4 1347 aa27.93■■■□□ 2.06
TGIF1-220ENST00000551557 TTC21AQ8NDW8 1320 aa27.93■■■□□ 2.06
TGIF1-220ENST00000551557 ONECUT3O60422 494 aaPredicted RBP27.93■■■□□ 2.06
TGIF1-220ENST00000551557 PUS7Q96PZ0 661 aaKnown RBP27.93■■■□□ 2.06
TGIF1-220ENST00000551557 COL18A1P39060 1754 aa27.93■■■□□ 2.06
TGIF1-220ENST00000551557 RGPD5Q99666 1765 aa27.93■■■□□ 2.06
TGIF1-220ENST00000551557 USP54Q70EL1 1684 aa27.92■■■□□ 2.06
TGIF1-220ENST00000551557 FAM98CQ17RN3 349 aaKnown RBP27.92■■■□□ 2.06
TGIF1-220ENST00000551557 STRN4Q9NRL3 753 aa27.92■■■□□ 2.06
TGIF1-220ENST00000551557 THSD7AQ9UPZ6 1657 aa27.91■■■□□ 2.06
TGIF1-220ENST00000551557 A0A1W2PP64 1363 aa27.89■■■□□ 2.06
TGIF1-220ENST00000551557 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.89■■■□□ 2.06
TGIF1-220ENST00000551557 ZBTB7CA1YPR0 619 aa27.88■■■□□ 2.05
TGIF1-220ENST00000551557 HDGFL2Q7Z4V5 671 aaPredicted RBP27.88■■■□□ 2.05
TGIF1-220ENST00000551557 ZRANB1Q9UGI0 708 aa27.88■■■□□ 2.05
TGIF1-220ENST00000551557 SPATA31A1Q5TZJ5 1347 aa27.87■■■□□ 2.05
TGIF1-220ENST00000551557 NFAT5O94916 1531 aa27.87■■■□□ 2.05
TGIF1-220ENST00000551557 A0A0G2JS52 829 aa27.86■■■□□ 2.05
TGIF1-220ENST00000551557 MYT1Q01538 1121 aa27.86■■■□□ 2.05
TGIF1-220ENST00000551557 EDC4Q6P2E9 1401 aaKnown RBP27.85■■■□□ 2.05
TGIF1-220ENST00000551557 COL5A2P05997 1499 aaPredicted RBP27.85■■■□□ 2.05
TGIF1-220ENST00000551557 SOX12O15370 315 aa27.85■■■□□ 2.05
TGIF1-220ENST00000551557 SLC24A1O60721 1099 aa27.85■■■□□ 2.05
TGIF1-220ENST00000551557 EVA1CP58658 441 aa27.85■■■□□ 2.05
TGIF1-220ENST00000551557 TERF2IPQ9NYB0 399 aa27.85■■■□□ 2.05
TGIF1-220ENST00000551557 LTN1O94822 1766 aa27.84■■■□□ 2.05
TGIF1-220ENST00000551557 TMF1P82094 1093 aa27.84■■■□□ 2.05
TGIF1-220ENST00000551557 LARP1Q6PKG0 1096 aaKnown RBP27.84■■■□□ 2.05
TGIF1-220ENST00000551557 NME9Q86XW9 330 aa27.84■■■□□ 2.05
TGIF1-220ENST00000551557 NINLQ9Y2I6 1382 aa27.84■■■□□ 2.05
TGIF1-220ENST00000551557 AATKQ6ZMQ8 1374 aa27.83■■■□□ 2.05
TGIF1-220ENST00000551557 KRT27Q7Z3Y8 459 aa27.82■■■□□ 2.04
TGIF1-220ENST00000551557 USP31Q70CQ4 1352 aa27.82■■■□□ 2.04
TGIF1-220ENST00000551557 USP35Q9P2H5 1018 aa27.81■■■□□ 2.04
TGIF1-220ENST00000551557 MYOM1P52179 1685 aa27.81■■■□□ 2.04
TGIF1-220ENST00000551557 ARHGEF25Q86VW2 580 aa27.8■■■□□ 2.04
TGIF1-220ENST00000551557 KCNH5Q8NCM2 988 aa27.8■■■□□ 2.04
TGIF1-220ENST00000551557 AXIN2Q9Y2T1 843 aa27.78■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms