RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 SNRKQ9NRH2 765 aa4.13□□□□□ -1.75
CPSF6-207ENST00000551516 PCDHB15Q9Y5E8 787 aa4.13□□□□□ -1.75
CPSF6-207ENST00000551516 IQGAP2Q13576 1575 aa4.13□□□□□ -1.75
CPSF6-207ENST00000551516 CUL7Q14999 1698 aa4.13□□□□□ -1.75
CPSF6-207ENST00000551516 CARMIL2Q6F5E8 1435 aa4.12□□□□□ -1.75
CPSF6-207ENST00000551516 CD109Q6YHK3 1445 aa4.12□□□□□ -1.75
CPSF6-207ENST00000551516 BHMG1C9JSJ3 638 aaPredicted RBP4.12□□□□□ -1.75
CPSF6-207ENST00000551516 HRCP23327 699 aa4.12□□□□□ -1.75
CPSF6-207ENST00000551516 ATP6V1AP38606 617 aa4.12□□□□□ -1.75
CPSF6-207ENST00000551516 MTMR2Q13614 643 aa4.12□□□□□ -1.75
CPSF6-207ENST00000551516 RTL5Q5HYW3 569 aaPredicted RBP4.12□□□□□ -1.75
CPSF6-207ENST00000551516 FBXO31Q5XUX0 539 aaPredicted RBP4.12□□□□□ -1.75
CPSF6-207ENST00000551516 CABLES1Q8TDN4 633 aa4.12□□□□□ -1.75
CPSF6-207ENST00000551516 ZFRQ96KR1 1074 aaKnown RBP4.12□□□□□ -1.75
CPSF6-207ENST00000551516 ZNF777Q9ULD5 760 aaPredicted RBP4.12□□□□□ -1.75
CPSF6-207ENST00000551516 COG6Q9Y2V7 657 aa4.12□□□□□ -1.75
CPSF6-207ENST00000551516 KIAA0556O60303 1618 aa4.12□□□□□ -1.75
CPSF6-207ENST00000551516 LMTK3Q96Q04 1460 aa4.11□□□□□ -1.75
CPSF6-207ENST00000551516 ADAMTSL3P82987 1691 aa4.11□□□□□ -1.75
CPSF6-207ENST00000551516 GOLGA8CPA6NN73 597 aa4.11□□□□□ -1.75
CPSF6-207ENST00000551516 SOCS7O14512 581 aa4.11□□□□□ -1.75
CPSF6-207ENST00000551516 CFHP08603 1231 aa4.11□□□□□ -1.75
CPSF6-207ENST00000551516 FUT2Q10981 343 aa4.11□□□□□ -1.75
CPSF6-207ENST00000551516 HELBQ8NG08 1087 aaPredicted RBP4.11□□□□□ -1.75
CPSF6-207ENST00000551516 FBXO41Q8TF61 875 aa4.11□□□□□ -1.75
CPSF6-207ENST00000551516 TSC1Q92574 1164 aa4.11□□□□□ -1.75
CPSF6-207ENST00000551516 POM121Q96HA1 1249 aa4.11□□□□□ -1.75
CPSF6-207ENST00000551516 LRCH3Q96II8 777 aa4.11□□□□□ -1.75
CPSF6-207ENST00000551516 HS3ST6Q96QI5 342 aa4.11□□□□□ -1.75
CPSF6-207ENST00000551516 ZNF330Q9Y3S2 320 aaPredicted RBP4.11□□□□□ -1.75
CPSF6-207ENST00000551516 PTPRMP28827 1452 aa4.11□□□□□ -1.75
CPSF6-207ENST00000551516 FRMPD1Q5SYB0 1578 aa4.1□□□□□ -1.75
CPSF6-207ENST00000551516 ZCCHC11Q5TAX3 1644 aaKnown RBP4.1□□□□□ -1.75
CPSF6-207ENST00000551516 C6orf229H3BNL8 230 aa4.1□□□□□ -1.75
CPSF6-207ENST00000551516 RAPGEF3O95398 923 aa4.1□□□□□ -1.75
CPSF6-207ENST00000551516 USP17L8P0C7I0 530 aa4.1□□□□□ -1.75
CPSF6-207ENST00000551516 GUCA2AQ02747 115 aa4.1□□□□□ -1.75
CPSF6-207ENST00000551516 ADGRD1Q6QNK2 874 aa4.1□□□□□ -1.75
CPSF6-207ENST00000551516 FNBP4Q8N3X1 1017 aaPredicted RBP4.1□□□□□ -1.75
CPSF6-207ENST00000551516 MTMR14Q8NCE2 650 aa4.1□□□□□ -1.75
CPSF6-207ENST00000551516 PRR14Q9BWN1 585 aa4.1□□□□□ -1.75
CPSF6-207ENST00000551516 C1orf115Q9H7X2 142 aa4.1□□□□□ -1.75
CPSF6-207ENST00000551516 CDKN2AIPQ9NXV6 580 aaPredicted RBP4.1□□□□□ -1.75
CPSF6-207ENST00000551516 PCDHGC3Q9UN70 934 aa4.1□□□□□ -1.75
CPSF6-207ENST00000551516 PHLDB1Q86UU1 1377 aa4.1□□□□□ -1.75
CPSF6-207ENST00000551516 FHOD3Q2V2M9 1422 aa4.1□□□□□ -1.75
CPSF6-207ENST00000551516 TEX14Q8IWB6 1497 aa4.1□□□□□ -1.75
CPSF6-207ENST00000551516 ABL2P42684 1182 aa4.09□□□□□ -1.75
CPSF6-207ENST00000551516 PPP4CP60510 307 aa4.09□□□□□ -1.75
CPSF6-207ENST00000551516 LSM11P83369 360 aaKnown RBP eCLIP4.09□□□□□ -1.755e-7■■■□□ 16.5
CPSF6-207ENST00000551516 CTDSPL2Q05D32 466 aa4.09□□□□□ -1.75
CPSF6-207ENST00000551516 HLA-CQ95604 372 aa4.09□□□□□ -1.75
CPSF6-207ENST00000551516 CCDC97Q96F63 343 aaPredicted RBP4.09□□□□□ -1.75
CPSF6-207ENST00000551516 GDPD2Q9HCC8 539 aa4.09□□□□□ -1.75
CPSF6-207ENST00000551516 SERPINA10Q9UK55 444 aa4.09□□□□□ -1.75
CPSF6-207ENST00000551516 NUP153P49790 1475 aaKnown RBP4.09□□□□□ -1.75
CPSF6-207ENST00000551516 ACTN4O43707 911 aaKnown RBP4.08□□□□□ -1.76
CPSF6-207ENST00000551516 Q3C1V9 767 aa4.08□□□□□ -1.76
CPSF6-207ENST00000551516 ANKRD13DQ6ZTN6 518 aa4.08□□□□□ -1.76
CPSF6-207ENST00000551516 CCDC82Q8N4S0 544 aa4.08□□□□□ -1.76
CPSF6-207ENST00000551516 ANKK1Q8NFD2 765 aa4.08□□□□□ -1.76
CPSF6-207ENST00000551516 SIGLEC1Q9BZZ2 1709 aa4.08□□□□□ -1.76
CPSF6-207ENST00000551516 NDUFB9Q9Y6M9 179 aa4.08□□□□□ -1.76
CPSF6-207ENST00000551516 ABCA9Q8IUA7 1624 aa4.07□□□□□ -1.76
CPSF6-207ENST00000551516 NEO1Q92859 1461 aa4.07□□□□□ -1.76
CPSF6-207ENST00000551516 HRO43593 1189 aa4.07□□□□□ -1.76
CPSF6-207ENST00000551516 ILDR2Q71H61 639 aa4.07□□□□□ -1.76
CPSF6-207ENST00000551516 PRR7Q8TB68 274 aa4.07□□□□□ -1.76
CPSF6-207ENST00000551516 TBC1D2BQ9UPU7 963 aa4.07□□□□□ -1.76
CPSF6-207ENST00000551516 YEATS2Q9ULM3 1422 aa4.06□□□□□ -1.76
CPSF6-207ENST00000551516 POTEB3A0JP26 581 aa4.06□□□□□ -1.76
CPSF6-207ENST00000551516 SOWAHBA6NEL2 793 aa4.06□□□□□ -1.76
CPSF6-207ENST00000551516 CFAP99D6REC4 459 aa4.06□□□□□ -1.76
CPSF6-207ENST00000551516 WASHC4Q2M389 1173 aa4.06□□□□□ -1.76
CPSF6-207ENST00000551516 PUS10Q3MIT2 529 aaKnown RBP4.06□□□□□ -1.76
CPSF6-207ENST00000551516 MORN1Q5T089 497 aa4.06□□□□□ -1.76
CPSF6-207ENST00000551516 POTEBQ6S5H4 581 aa4.06□□□□□ -1.76
CPSF6-207ENST00000551516 RETREG3Q86VR2 466 aa4.06□□□□□ -1.76
CPSF6-207ENST00000551516 PNMA1Q8ND90 353 aa4.06□□□□□ -1.76
CPSF6-207ENST00000551516 SYMPKQ92797 1274 aaKnown RBP4.06□□□□□ -1.76
CPSF6-207ENST00000551516 WNT2BQ93097 391 aa4.06□□□□□ -1.76
CPSF6-207ENST00000551516 GJD4Q96KN9 370 aaPredicted RBP4.06□□□□□ -1.76
CPSF6-207ENST00000551516 CALR3Q96L12 384 aaKnown RBP4.06□□□□□ -1.76
CPSF6-207ENST00000551516 TSR3Q9UJK0 312 aaKnown RBP4.06□□□□□ -1.76
CPSF6-207ENST00000551516 HPS5Q9UPZ3 1129 aa4.06□□□□□ -1.76
CPSF6-207ENST00000551516 SLC27A5Q9Y2P5 690 aa4.06□□□□□ -1.76
CPSF6-207ENST00000551516 TSPOAP1O95153 1857 aa4.06□□□□□ -1.76
CPSF6-207ENST00000551516 SAMD9Q5K651 1589 aa4.06□□□□□ -1.76
CPSF6-207ENST00000551516 DESI1Q6ICB0 168 aa4.05□□□□□ -1.76
CPSF6-207ENST00000551516 LRRN4Q8WUT4 740 aa4.05□□□□□ -1.76
CPSF6-207ENST00000551516 PCF11O94913 1555 aaKnown RBP4.05□□□□□ -1.76
CPSF6-207ENST00000551516 GOLGA3Q08378 1498 aa4.05□□□□□ -1.76
CPSF6-207ENST00000551516 CFAP43Q8NDM7 1665 aa4.04□□□□□ -1.76
CPSF6-207ENST00000551516 TTBK1Q5TCY1 1321 aaPredicted RBP4.04□□□□□ -1.76
CPSF6-207ENST00000551516 POTEMA6NI47 508 aa4.04□□□□□ -1.76
CPSF6-207ENST00000551516 NR1I2O75469 434 aa4.04□□□□□ -1.76
CPSF6-207ENST00000551516 FMNL1O95466 1100 aaPredicted RBP4.04□□□□□ -1.76
CPSF6-207ENST00000551516 HMX1Q9NP08 348 aaPredicted RBP4.04□□□□□ -1.76
CPSF6-207ENST00000551516 SALL2Q9Y467 1007 aaPredicted RBP4.04□□□□□ -1.76
CPSF6-207ENST00000551516 PCDHB3Q9Y5E6 796 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms