RNA–Protein interactions for RNA: ENST00000551261.5

LETMD1-229, Transcript of LETM1 domain containing 1, humanhuman

TSL 5

Gene LETMD1, Length 521 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-229ENST00000551261 CFAP53Q96M91 514 aa19.08■□□□□ 0.64
LETMD1-229ENST00000551261 PHF8Q9UPP1 1060 aa19.07■□□□□ 0.64
LETMD1-229ENST00000551261 OVOS2A0A0J9YW53 1432 aa19.07■□□□□ 0.64
LETMD1-229ENST00000551261 OVOS2Q6IE36 1432 aa19.07■□□□□ 0.64
LETMD1-229ENST00000551261 SMG6Q86US8 1419 aaKnown RBP19.07■□□□□ 0.64
LETMD1-229ENST00000551261 TTC21BQ7Z4L5 1316 aa19.06■□□□□ 0.64
LETMD1-229ENST00000551261 C1orf167Q5SNV9 1468 aa19.06■□□□□ 0.64
LETMD1-229ENST00000551261 ATF3P18847 181 aa19.06■□□□□ 0.64
LETMD1-229ENST00000551261 FAM9BQ8IZU0 186 aa19.06■□□□□ 0.64
LETMD1-229ENST00000551261 COG3Q96JB2 828 aa19.06■□□□□ 0.64
LETMD1-229ENST00000551261 USP31Q70CQ4 1352 aa19.06■□□□□ 0.64
LETMD1-229ENST00000551261 BLMP54132 1417 aaPredicted RBP19.05■□□□□ 0.64
LETMD1-229ENST00000551261 MST1RQ04912 1400 aa19.05■□□□□ 0.64
LETMD1-229ENST00000551261 WDR43Q15061 677 aaKnown RBP eCLIP19.04■□□□□ 0.64
LETMD1-229ENST00000551261 GGNBP2Q9H3C7 697 aa19.04■□□□□ 0.64
LETMD1-229ENST00000551261 XIRP1Q702N8 1843 aaKnown RBP19.04■□□□□ 0.64
LETMD1-229ENST00000551261 NUTM2FA1L443 756 aa19.03■□□□□ 0.64
LETMD1-229ENST00000551261 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.03■□□□□ 0.64
LETMD1-229ENST00000551261 CDK12Q9NYV4 1490 aaPredicted RBP19.02■□□□□ 0.63
LETMD1-229ENST00000551261 PIK3C2AO00443 1686 aa19.01■□□□□ 0.63
LETMD1-229ENST00000551261 ZBED9Q6R2W3 1325 aa19.01■□□□□ 0.63
LETMD1-229ENST00000551261 HNRNPUQ00839 825 aaKnown RBP eCLIP19■□□□□ 0.63
LETMD1-229ENST00000551261 PMFBP1Q8TBY8 1022 aa19■□□□□ 0.63
LETMD1-229ENST00000551261 ZNF335Q9H4Z2 1342 aaPredicted RBP19■□□□□ 0.63
LETMD1-229ENST00000551261 SHPRHQ149N8 1683 aa18.99■□□□□ 0.63
LETMD1-229ENST00000551261 PNPLA6Q8IY17 1366 aa18.99■□□□□ 0.63
LETMD1-229ENST00000551261 ESCO1Q5FWF5 840 aa18.99■□□□□ 0.63
LETMD1-229ENST00000551261 NME9Q86XW9 330 aa18.99■□□□□ 0.63
LETMD1-229ENST00000551261 KIF24Q5T7B8 1368 aa18.98■□□□□ 0.63
LETMD1-229ENST00000551261 NGEFQ8N5V2 710 aa18.98■□□□□ 0.63
LETMD1-229ENST00000551261 COL3A1P02461 1466 aaPredicted RBP18.97■□□□□ 0.63
LETMD1-229ENST00000551261 MTHFSP49914 203 aa18.97■□□□□ 0.63
LETMD1-229ENST00000551261 RBM33Q96EV2 1170 aaKnown RBP18.96■□□□□ 0.63
LETMD1-229ENST00000551261 NUDCQ9Y266 331 aa18.96■□□□□ 0.63
LETMD1-229ENST00000551261 TRPM3Q9HCF6 1732 aaPredicted RBP18.95■□□□□ 0.62
LETMD1-229ENST00000551261 TNNT2P45379 298 aaPredicted RBP18.94■□□□□ 0.62
LETMD1-229ENST00000551261 PSME1Q06323 249 aa18.94■□□□□ 0.62
LETMD1-229ENST00000551261 NPHP3Q7Z494 1330 aa18.94■□□□□ 0.62
LETMD1-229ENST00000551261 SBNO1A3KN83 1393 aa18.93■□□□□ 0.62
LETMD1-229ENST00000551261 MAP2P11137 1827 aaKnown RBP18.92■□□□□ 0.62
LETMD1-229ENST00000551261 RTL1A6NKG5 1358 aa18.92■□□□□ 0.62
LETMD1-229ENST00000551261 MARF1Q9Y4F3 1742 aaKnown RBP18.91■□□□□ 0.62
LETMD1-229ENST00000551261 PNNQ9H307 717 aaKnown RBP18.91■□□□□ 0.62
LETMD1-229ENST00000551261 POLKQ9UBT6 870 aa18.91■□□□□ 0.62
LETMD1-229ENST00000551261 LTBP4Q8N2S1 1624 aa18.91■□□□□ 0.62
LETMD1-229ENST00000551261 PHRF1Q9P1Y6 1649 aaKnown RBP18.9■□□□□ 0.62
LETMD1-229ENST00000551261 ALS2Q96Q42 1657 aa18.9■□□□□ 0.62
LETMD1-229ENST00000551261 NCBP3Q53F19 620 aaKnown RBP18.9■□□□□ 0.62
LETMD1-229ENST00000551261 ORAI2Q96SN7 254 aa18.9■□□□□ 0.62
LETMD1-229ENST00000551261 SLIT3O75094 1523 aa18.9■□□□□ 0.62
LETMD1-229ENST00000551261 ABTB2Q8N961 1025 aa18.89■□□□□ 0.61
LETMD1-229ENST00000551261 KCNH5Q8NCM2 988 aa18.89■□□□□ 0.61
LETMD1-229ENST00000551261 ADAMTS8Q9UP79 889 aa18.89■□□□□ 0.61
LETMD1-229ENST00000551261 DIAPH1O60610 1272 aaKnown RBP18.88■□□□□ 0.61
LETMD1-229ENST00000551261 NLRP6P59044 892 aa18.88■□□□□ 0.61
LETMD1-229ENST00000551261 FLT4P35916 1363 aa18.88■□□□□ 0.61
LETMD1-229ENST00000551261 ARHGEF10O15013 1369 aa18.87■□□□□ 0.61
LETMD1-229ENST00000551261 PDE3BQ13370 1112 aa18.87■□□□□ 0.61
LETMD1-229ENST00000551261 MED1Q15648 1581 aaPredicted RBP18.87■□□□□ 0.61
LETMD1-229ENST00000551261 PXDNQ92626 1479 aa18.86■□□□□ 0.61
LETMD1-229ENST00000551261 TNS3Q68CZ2 1445 aa18.86■□□□□ 0.61
LETMD1-229ENST00000551261 FOXO3O43524 673 aa18.86■□□□□ 0.61
LETMD1-229ENST00000551261 PAK3O75914 559 aaPredicted RBP18.86■□□□□ 0.61
LETMD1-229ENST00000551261 NFAT5O94916 1531 aa18.85■□□□□ 0.61
LETMD1-229ENST00000551261 ABCC6O95255 1503 aa18.85■□□□□ 0.61
LETMD1-229ENST00000551261 IQSEC2Q5JU85 1478 aa18.85■□□□□ 0.61
LETMD1-229ENST00000551261 USP19O94966 1318 aa18.85■□□□□ 0.61
LETMD1-229ENST00000551261 KRT28Q7Z3Y7 464 aa18.85■□□□□ 0.61
LETMD1-229ENST00000551261 SLAIN2Q9P270 581 aa18.85■□□□□ 0.61
LETMD1-229ENST00000551261 NHSL1Q5SYE7 1610 aa18.85■□□□□ 0.61
LETMD1-229ENST00000551261 ZRANB1Q9UGI0 708 aa18.84■□□□□ 0.61
LETMD1-229ENST00000551261 RUNDC1Q96C34 613 aa18.83■□□□□ 0.6
LETMD1-229ENST00000551261 BRINP3Q76B58 766 aa18.82■□□□□ 0.6
LETMD1-229ENST00000551261 EMILIN1Q9Y6C2 1016 aa18.82■□□□□ 0.6
LETMD1-229ENST00000551261 PEAK1Q9H792 1746 aa18.82■□□□□ 0.6
LETMD1-229ENST00000551261 U2AF1L5P0DN76 240 aaPredicted RBP18.81■□□□□ 0.6
LETMD1-229ENST00000551261 U2AF1Q01081 240 aaKnown RBP eCLIP18.81■□□□□ 0.6
LETMD1-229ENST00000551261 MAP3K19Q56UN5 1328 aa18.8■□□□□ 0.6
LETMD1-229ENST00000551261 FCHSD2O94868 740 aa18.8■□□□□ 0.6
LETMD1-229ENST00000551261 NEFMP07197 916 aa18.8■□□□□ 0.6
LETMD1-229ENST00000551261 LTN1O94822 1766 aa18.79■□□□□ 0.6
LETMD1-229ENST00000551261 PPM1GO15355 546 aaPredicted RBP18.79■□□□□ 0.6
LETMD1-229ENST00000551261 RGPD1P0DJD0 1748 aa18.79■□□□□ 0.6
LETMD1-229ENST00000551261 AHDC1Q5TGY3 1603 aaPredicted RBP18.78■□□□□ 0.6
LETMD1-229ENST00000551261 SOS2Q07890 1332 aaPredicted RBP18.78■□□□□ 0.6
LETMD1-229ENST00000551261 U2SURPO15042 1029 aaKnown RBP18.78■□□□□ 0.6
LETMD1-229ENST00000551261 IL13P35225 146 aa18.78■□□□□ 0.6
LETMD1-229ENST00000551261 RRS1Q15050 365 aaKnown RBP18.78■□□□□ 0.6
LETMD1-229ENST00000551261 SPATA31A3Q5VYP0 1347 aa18.77■□□□□ 0.6
LETMD1-229ENST00000551261 MAPK8IP3Q9UPT6 1336 aa18.77■□□□□ 0.6
LETMD1-229ENST00000551261 CCDC27Q2M243 656 aa18.77■□□□□ 0.6
LETMD1-229ENST00000551261 AEBP2Q6ZN18 517 aaPredicted RBP18.77■□□□□ 0.6
LETMD1-229ENST00000551261 AMPHP49418 695 aa18.76■□□□□ 0.59
LETMD1-229ENST00000551261 CRYBG1Q9Y4K1 1723 aa18.76■□□□□ 0.59
LETMD1-229ENST00000551261 ZNF521Q96K83 1311 aa18.74■□□□□ 0.59
LETMD1-229ENST00000551261 GCP02774 474 aa18.73■□□□□ 0.59
LETMD1-229ENST00000551261 ROBO1Q9Y6N7 1651 aa18.73■□□□□ 0.59
LETMD1-229ENST00000551261 APAF1O14727 1248 aa18.72■□□□□ 0.59
LETMD1-229ENST00000551261 HOXC9P31274 260 aa18.72■□□□□ 0.59
LETMD1-229ENST00000551261 EIF4A2Q14240 407 aaKnown RBP18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms