RNA–Protein interactions for RNA: ENST00000551260.5

RACGAP1-223, Transcript of Rac GTPase activating protein 1, humanhuman

TSL 4

Gene RACGAP1, Length 555 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACGAP1-223ENST00000551260 KRT27Q7Z3Y8 459 aa9.56□□□□□ -0.88
RACGAP1-223ENST00000551260 IFNL1Q8IU54 200 aa9.56□□□□□ -0.88
RACGAP1-223ENST00000551260 NWD2Q9ULI1 1742 aa9.56□□□□□ -0.88
RACGAP1-223ENST00000551260 FAM182BQ5T319 152 aa9.55□□□□□ -0.88
RACGAP1-223ENST00000551260 UNC5CLQ8IV45 518 aa9.55□□□□□ -0.88
RACGAP1-223ENST00000551260 USP32Q8NFA0 1604 aa9.55□□□□□ -0.88
RACGAP1-223ENST00000551260 ABCA3Q99758 1704 aa9.54□□□□□ -0.88
RACGAP1-223ENST00000551260 HDGFP51858 240 aaKnown RBP9.54□□□□□ -0.88
RACGAP1-223ENST00000551260 EZH2Q15910 746 aaKnown RBP9.54□□□□□ -0.88
RACGAP1-223ENST00000551260 DCBLD2Q96PD2 775 aa9.54□□□□□ -0.88
RACGAP1-223ENST00000551260 E9PCH4 1651 aa9.54□□□□□ -0.88
RACGAP1-223ENST00000551260 XPCQ01831 940 aaPredicted RBP9.53□□□□□ -0.88
RACGAP1-223ENST00000551260 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.53□□□□□ -0.88
RACGAP1-223ENST00000551260 NRAPQ86VF7 1730 aa9.53□□□□□ -0.88
RACGAP1-223ENST00000551260 PXDNQ92626 1479 aa9.53□□□□□ -0.88
RACGAP1-223ENST00000551260 METP08581 1390 aa9.52□□□□□ -0.88
RACGAP1-223ENST00000551260 RGPD8O14715 1765 aaPredicted RBP9.52□□□□□ -0.89
RACGAP1-223ENST00000551260 PPP1R1BQ9UD71 204 aaPredicted RBP9.51□□□□□ -0.89
RACGAP1-223ENST00000551260 MYOM1P52179 1685 aa9.51□□□□□ -0.89
RACGAP1-223ENST00000551260 A0A0G2JS52 829 aa9.5□□□□□ -0.89
RACGAP1-223ENST00000551260 ATMINO43313 823 aaPredicted RBP9.5□□□□□ -0.89
RACGAP1-223ENST00000551260 ONECUT3O60422 494 aaPredicted RBP9.5□□□□□ -0.89
RACGAP1-223ENST00000551260 MYT1Q01538 1121 aa9.5□□□□□ -0.89
RACGAP1-223ENST00000551260 ASTLQ6HA08 431 aaPredicted RBP9.5□□□□□ -0.89
RACGAP1-223ENST00000551260 PCDHB8Q9UN66 801 aa9.5□□□□□ -0.89
RACGAP1-223ENST00000551260 CCDC9Q9Y3X0 531 aaKnown RBP9.5□□□□□ -0.89
RACGAP1-223ENST00000551260 RPRD2Q5VT52 1461 aaKnown RBP9.5□□□□□ -0.89
RACGAP1-223ENST00000551260 NRKQ7Z2Y5 1582 aa9.5□□□□□ -0.89
RACGAP1-223ENST00000551260 NINLQ9Y2I6 1382 aa9.5□□□□□ -0.89
RACGAP1-223ENST00000551260 IQGAP3Q86VI3 1631 aa9.49□□□□□ -0.89
RACGAP1-223ENST00000551260 PELP1Q8IZL8 1130 aaKnown RBP9.49□□□□□ -0.89
RACGAP1-223ENST00000551260 BMP2KQ9NSY1 1161 aaPredicted RBP9.49□□□□□ -0.89
RACGAP1-223ENST00000551260 DISP2A7MBM2 1401 aa9.48□□□□□ -0.89
RACGAP1-223ENST00000551260 ABCC5O15440 1437 aa9.48□□□□□ -0.89
RACGAP1-223ENST00000551260 MYOM3Q5VTT5 1437 aa9.48□□□□□ -0.89
RACGAP1-223ENST00000551260 TIE1P35590 1138 aa9.48□□□□□ -0.89
RACGAP1-223ENST00000551260 VPS72Q15906 364 aa9.48□□□□□ -0.89
RACGAP1-223ENST00000551260 CAMKK2Q96RR4 588 aa9.48□□□□□ -0.89
RACGAP1-223ENST00000551260 ADGRB2O60241 1585 aa9.48□□□□□ -0.89
RACGAP1-223ENST00000551260 CASZ1Q86V15 1759 aa9.47□□□□□ -0.89
RACGAP1-223ENST00000551260 UTRNP46939 3433 aa9.47□□□□□ -0.89
RACGAP1-223ENST00000551260 ADGRL2O95490 1459 aa9.47□□□□□ -0.89
RACGAP1-223ENST00000551260 THSD7AQ9UPZ6 1657 aa9.46□□□□□ -0.89
RACGAP1-223ENST00000551260 ATN1P54259 1190 aaPredicted RBP9.46□□□□□ -0.9
RACGAP1-223ENST00000551260 FAM98CQ17RN3 349 aaKnown RBP9.46□□□□□ -0.9
RACGAP1-223ENST00000551260 ZNF467Q7Z7K2 595 aaPredicted RBP9.46□□□□□ -0.9
RACGAP1-223ENST00000551260 SPON1Q9HCB6 807 aa9.46□□□□□ -0.9
RACGAP1-223ENST00000551260 TTLL13PA6NNM8 815 aa9.45□□□□□ -0.9
RACGAP1-223ENST00000551260 FOXO3O43524 673 aa9.45□□□□□ -0.9
RACGAP1-223ENST00000551260 KCNQ2O43526 872 aa9.45□□□□□ -0.9
RACGAP1-223ENST00000551260 CHIC2Q9UKJ5 165 aa9.45□□□□□ -0.9
RACGAP1-223ENST00000551260 NPHP3Q7Z494 1330 aa9.45□□□□□ -0.9
RACGAP1-223ENST00000551260 TRIM37O94972 964 aa9.44□□□□□ -0.9
RACGAP1-223ENST00000551260 ESCO1Q5FWF5 840 aa9.44□□□□□ -0.9
RACGAP1-223ENST00000551260 CABLES1Q8TDN4 633 aa9.44□□□□□ -0.9
RACGAP1-223ENST00000551260 RNF25Q96BH1 459 aaPredicted RBP9.44□□□□□ -0.9
RACGAP1-223ENST00000551260 DAPK1P53355 1430 aa9.44□□□□□ -0.9
RACGAP1-223ENST00000551260 ROBO2Q9HCK4 1378 aa9.42□□□□□ -0.9
RACGAP1-223ENST00000551260 SHANK3Q9BYB0 1731 aa9.42□□□□□ -0.9
RACGAP1-223ENST00000551260 CDC42BPGQ6DT37 1551 aa9.41□□□□□ -0.9
RACGAP1-223ENST00000551260 SBF2Q86WG5 1849 aa9.41□□□□□ -0.9
RACGAP1-223ENST00000551260 GIGYF1O75420 1035 aaPredicted RBP9.41□□□□□ -0.9
RACGAP1-223ENST00000551260 APBA3O96018 575 aa9.41□□□□□ -0.9
RACGAP1-223ENST00000551260 TMEM106CQ9BVX2 250 aa9.41□□□□□ -0.9
RACGAP1-223ENST00000551260 FMN2Q9NZ56 1722 aa9.4□□□□□ -0.9
RACGAP1-223ENST00000551260 SPATA31A3Q5VYP0 1347 aa9.4□□□□□ -0.9
RACGAP1-223ENST00000551260 KIF1AQ12756 1690 aa9.4□□□□□ -0.9
RACGAP1-223ENST00000551260 NUTM2FA1L443 756 aa9.4□□□□□ -0.9
RACGAP1-223ENST00000551260 KIF1BO60333 1816 aa9.4□□□□□ -0.91
RACGAP1-223ENST00000551260 COL14A1Q05707 1796 aaKnown RBP9.4□□□□□ -0.91
RACGAP1-223ENST00000551260 ANKRD30AQ9BXX3 1397 aa9.39□□□□□ -0.91
RACGAP1-223ENST00000551260 FAM83GA6ND36 823 aa9.39□□□□□ -0.91
RACGAP1-223ENST00000551260 ECM2O94769 699 aaPredicted RBP9.39□□□□□ -0.91
RACGAP1-223ENST00000551260 HAP1P54257 671 aaPredicted RBP9.39□□□□□ -0.91
RACGAP1-223ENST00000551260 KANK4Q5T7N3 995 aaPredicted RBP9.39□□□□□ -0.91
RACGAP1-223ENST00000551260 PDGFDQ9GZP0 370 aaPredicted RBP9.39□□□□□ -0.91
RACGAP1-223ENST00000551260 NEXMIFQ5QGS0 1516 aa9.39□□□□□ -0.91
RACGAP1-223ENST00000551260 IFT172Q9UG01 1749 aa9.39□□□□□ -0.91
RACGAP1-223ENST00000551260 PARD3Q8TEW0 1356 aa9.38□□□□□ -0.91
RACGAP1-223ENST00000551260 PSEN1P49768 467 aa9.38□□□□□ -0.91
RACGAP1-223ENST00000551260 NBPF8Q3BBV2 869 aa9.38□□□□□ -0.91
RACGAP1-223ENST00000551260 NBPF14Q5TI25 921 aa9.38□□□□□ -0.91
RACGAP1-223ENST00000551260 TRIM35Q9UPQ4 493 aa9.38□□□□□ -0.91
RACGAP1-223ENST00000551260 PDAP1Q13442 181 aaKnown RBP9.37□□□□□ -0.91
RACGAP1-223ENST00000551260 CRYBG1Q9Y4K1 1723 aa9.36□□□□□ -0.91
RACGAP1-223ENST00000551260 RIOK3O14730 519 aaKnown RBP9.36□□□□□ -0.91
RACGAP1-223ENST00000551260 ZNF326Q5BKZ1 582 aaKnown RBP9.36□□□□□ -0.91
RACGAP1-223ENST00000551260 SLC39A7Q92504 469 aa9.36□□□□□ -0.91
RACGAP1-223ENST00000551260 BTG4Q9NY30 223 aa9.36□□□□□ -0.91
RACGAP1-223ENST00000551260 CLTCL1P53675 1640 aa9.35□□□□□ -0.91
RACGAP1-223ENST00000551260 RGPD3A6NKT7 1758 aaPredicted RBP9.35□□□□□ -0.91
RACGAP1-223ENST00000551260 RGPD4Q7Z3J3 1758 aa9.35□□□□□ -0.91
RACGAP1-223ENST00000551260 ZBTB7AO95365 584 aa9.35□□□□□ -0.91
RACGAP1-223ENST00000551260 TNS3Q68CZ2 1445 aa9.35□□□□□ -0.91
RACGAP1-223ENST00000551260 KRT28Q7Z3Y7 464 aa9.35□□□□□ -0.91
RACGAP1-223ENST00000551260 FHDC1Q9C0D6 1143 aaPredicted RBP9.35□□□□□ -0.91
RACGAP1-223ENST00000551260 METRNQ9UJH8 293 aa9.35□□□□□ -0.91
RACGAP1-223ENST00000551260 LRPPRCP42704 1394 aaKnown RBP9.35□□□□□ -0.91
RACGAP1-223ENST00000551260 SPATA31A5Q5VU36 1347 aa9.34□□□□□ -0.91
RACGAP1-223ENST00000551260 SPATA31A7Q8IWB4 1347 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms