RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 MRC2Q9UBG0 1479 aa9.07□□□□□ -0.96
CPSF6-206ENST00000550987 GPR37L1O60883 481 aa9.06□□□□□ -0.96
CPSF6-206ENST00000550987 CDCA8Q53HL2 280 aa9.06□□□□□ -0.96
CPSF6-206ENST00000550987 TMCO4Q5TGY1 634 aa9.06□□□□□ -0.96
CPSF6-206ENST00000550987 DESI1Q6ICB0 168 aa9.06□□□□□ -0.96
CPSF6-206ENST00000550987 MARVELD3Q96A59 401 aa9.06□□□□□ -0.96
CPSF6-206ENST00000550987 BHMG1C9JSJ3 638 aaPredicted RBP9.05□□□□□ -0.96
CPSF6-206ENST00000550987 PPP4CP60510 307 aa9.05□□□□□ -0.96
CPSF6-206ENST00000550987 LYPD8Q6UX82 237 aa9.05□□□□□ -0.96
CPSF6-206ENST00000550987 USB1Q9BQ65 265 aaKnown RBP9.05□□□□□ -0.96
CPSF6-206ENST00000550987 USTQ9Y2C2 406 aa9.05□□□□□ -0.96
CPSF6-206ENST00000550987 LAMC3Q9Y6N6 1575 aa9.04□□□□□ -0.96
CPSF6-206ENST00000550987 TK2O00142 265 aa9.04□□□□□ -0.96
CPSF6-206ENST00000550987 ST18O60284 1047 aa9.03□□□□□ -0.96
CPSF6-206ENST00000550987 ANKK1Q8NFD2 765 aa9.03□□□□□ -0.96
CPSF6-206ENST00000550987 KDM6BO15054 1643 aa9.02□□□□□ -0.96
CPSF6-206ENST00000550987 BRD1O95696 1058 aa9.02□□□□□ -0.97
CPSF6-206ENST00000550987 NR1H3Q13133 447 aa9.02□□□□□ -0.97
CPSF6-206ENST00000550987 NR1I2O75469 434 aa9.01□□□□□ -0.97
CPSF6-206ENST00000550987 FMNL1O95466 1100 aaPredicted RBP9.01□□□□□ -0.97
CPSF6-206ENST00000550987 CTHP32929 405 aa9.01□□□□□ -0.97
CPSF6-206ENST00000550987 SRPK2P78362 688 aaKnown RBP9.01□□□□□ -0.97
CPSF6-206ENST00000550987 BLOC1S3Q6QNY0 202 aa9.01□□□□□ -0.97
CPSF6-206ENST00000550987 RNF19BQ6ZMZ0 732 aa9.01□□□□□ -0.97
CPSF6-206ENST00000550987 VRTNQ9H8Y1 702 aa9.01□□□□□ -0.97
CPSF6-206ENST00000550987 ZBBXA8MT70 800 aa9□□□□□ -0.97
CPSF6-206ENST00000550987 KCNA1Q09470 495 aa9□□□□□ -0.97
CPSF6-206ENST00000550987 BRICD5Q6PL45 260 aa9□□□□□ -0.97
CPSF6-206ENST00000550987 TBC1D9Q6ZT07 1266 aa9□□□□□ -0.97
CPSF6-206ENST00000550987 SCUBE3Q8IX30 993 aa9□□□□□ -0.97
CPSF6-206ENST00000550987 UCN2Q96RP3 112 aa9□□□□□ -0.97
CPSF6-206ENST00000550987 FKBPLQ9UIM3 349 aa9□□□□□ -0.97
CPSF6-206ENST00000550987 HPS5Q9UPZ3 1129 aa9□□□□□ -0.97
CPSF6-206ENST00000550987 PCDHB3Q9Y5E6 796 aa9□□□□□ -0.97
CPSF6-206ENST00000550987 MAFBQ9Y5Q3 323 aaPredicted RBP9□□□□□ -0.97
CPSF6-206ENST00000550987 SCRIBQ14160 1630 aa9□□□□□ -0.97
CPSF6-206ENST00000550987 ATP9BO43861 1147 aa8.99□□□□□ -0.97
CPSF6-206ENST00000550987 ADGRD1Q6QNK2 874 aa8.99□□□□□ -0.97
CPSF6-206ENST00000550987 SALL2Q9Y467 1007 aaPredicted RBP8.99□□□□□ -0.97
CPSF6-206ENST00000550987 ATG7O95352 703 aa8.98□□□□□ -0.97
CPSF6-206ENST00000550987 PDS5BQ9NTI5 1447 aa8.97□□□□□ -0.97
CPSF6-206ENST00000550987 MYO15BQ96JP2 1530 aa8.97□□□□□ -0.97
CPSF6-206ENST00000550987 CARNS1A5YM72 827 aa8.97□□□□□ -0.97
CPSF6-206ENST00000550987 FBXO45P0C2W1 286 aa8.97□□□□□ -0.97
CPSF6-206ENST00000550987 TSR3Q9UJK0 312 aaKnown RBP8.97□□□□□ -0.97
CPSF6-206ENST00000550987 MFAP1P55081 439 aaKnown RBP8.96□□□□□ -0.98
CPSF6-206ENST00000550987 LSM11P83369 360 aaKnown RBP eCLIP8.96□□□□□ -0.985e-21■■■■□ 26
CPSF6-206ENST00000550987 ANKRD13DQ6ZTN6 518 aa8.96□□□□□ -0.98
CPSF6-206ENST00000550987 FAM163AQ96GL9 167 aaPredicted RBP8.96□□□□□ -0.98
CPSF6-206ENST00000550987 SOWAHBA6NEL2 793 aa8.95□□□□□ -0.98
CPSF6-206ENST00000550987 SKIP12755 728 aa8.95□□□□□ -0.98
CPSF6-206ENST00000550987 JUNDP17535 347 aa8.95□□□□□ -0.98
CPSF6-206ENST00000550987 APLP1P51693 650 aa8.95□□□□□ -0.98
CPSF6-206ENST00000550987 PTPRNQ16849 979 aa8.95□□□□□ -0.98
CPSF6-206ENST00000550987 ARMC2Q8NEN0 867 aa8.95□□□□□ -0.98
CPSF6-206ENST00000550987 ZNF592Q92610 1267 aa8.95□□□□□ -0.98
CPSF6-206ENST00000550987 HS3ST6Q96QI5 342 aa8.95□□□□□ -0.98
CPSF6-206ENST00000550987 MAP10Q9P2G4 905 aa8.95□□□□□ -0.98
CPSF6-206ENST00000550987 BCAMP50895 628 aa8.94□□□□□ -0.98
CPSF6-206ENST00000550987 PTK2Q05397 1052 aa8.94□□□□□ -0.98
CPSF6-206ENST00000550987 LHX8Q68G74 356 aa8.94□□□□□ -0.98
CPSF6-206ENST00000550987 WNT2BQ93097 391 aa8.94□□□□□ -0.98
CPSF6-206ENST00000550987 ZC3H4Q9UPT8 1303 aaKnown RBP8.94□□□□□ -0.98
CPSF6-206ENST00000550987 CHD1O14646 1710 aa8.94□□□□□ -0.98
CPSF6-206ENST00000550987 MTMR7Q9Y216 660 aa8.93□□□□□ -0.98
CPSF6-206ENST00000550987 NCAPD3P42695 1498 aa8.92□□□□□ -0.98
CPSF6-206ENST00000550987 F12P00748 615 aaPredicted RBP8.92□□□□□ -0.98
CPSF6-206ENST00000550987 SLFNL1Q499Z3 407 aa8.92□□□□□ -0.98
CPSF6-206ENST00000550987 B4GALNT3Q6L9W6 998 aa8.92□□□□□ -0.98
CPSF6-206ENST00000550987 NFATC2IPQ8NCF5 419 aa8.92□□□□□ -0.98
CPSF6-206ENST00000550987 PIK3CDO00329 1044 aa8.91□□□□□ -0.98
CPSF6-206ENST00000550987 CCNYL3P0C7X3 344 aa8.91□□□□□ -0.98
CPSF6-206ENST00000550987 THAP11Q96EK4 314 aa8.91□□□□□ -0.98
CPSF6-206ENST00000550987 SPSB2Q99619 263 aa8.91□□□□□ -0.98
CPSF6-206ENST00000550987 PCDHB9Q9Y5E1 797 aa8.91□□□□□ -0.98
CPSF6-206ENST00000550987 USP17L3A6NCW0 530 aa8.9□□□□□ -0.98
CPSF6-206ENST00000550987 USP17L4A6NCW7 530 aa8.9□□□□□ -0.98
CPSF6-206ENST00000550987 HRO43593 1189 aa8.9□□□□□ -0.98
CPSF6-206ENST00000550987 MCCD1P59942 119 aaPredicted RBP8.9□□□□□ -0.98
CPSF6-206ENST00000550987 KANK4Q5T7N3 995 aaPredicted RBP8.9□□□□□ -0.98
CPSF6-206ENST00000550987 USP17L2Q6R6M4 530 aa8.9□□□□□ -0.98
CPSF6-206ENST00000550987 USP17L1Q7RTZ2 530 aa8.9□□□□□ -0.98
CPSF6-206ENST00000550987 DEPDC4Q8N2C3 294 aa8.9□□□□□ -0.98
CPSF6-206ENST00000550987 NUDT12Q9BQG2 462 aa8.9□□□□□ -0.98
CPSF6-206ENST00000550987 EVA1BQ9NVM1 165 aa8.9□□□□□ -0.98
CPSF6-206ENST00000550987 IVNS1ABPQ9Y6Y0 642 aa8.9□□□□□ -0.98
CPSF6-206ENST00000550987 TMEM88BA6NKF7 163 aa8.89□□□□□ -0.99
CPSF6-206ENST00000550987 COPS2P61201 443 aa8.89□□□□□ -0.99
CPSF6-206ENST00000550987 KCNH2Q12809 1159 aa8.89□□□□□ -0.99
CPSF6-206ENST00000550987 PDXDC2PQ6P474 469 aa8.89□□□□□ -0.99
CPSF6-206ENST00000550987 LARP1Q6PKG0 1096 aaKnown RBP8.89□□□□□ -0.99
CPSF6-206ENST00000550987 RGS22Q8NE09 1264 aa8.89□□□□□ -0.99
CPSF6-206ENST00000550987 CEP126Q9P2H0 1117 aa8.89□□□□□ -0.99
CPSF6-206ENST00000550987 GPSM3Q9Y4H4 160 aa8.89□□□□□ -0.99
CPSF6-206ENST00000550987 USP17L5A8MUK1 530 aa8.88□□□□□ -0.99
CPSF6-206ENST00000550987 NBPF14Q5TI25 921 aa8.88□□□□□ -0.99
CPSF6-206ENST00000550987 RNF135Q8IUD6 432 aa8.88□□□□□ -0.99
CPSF6-206ENST00000550987 GPKOWQ92917 476 aaPredicted RBP eCLIP8.88□□□□□ -0.99
CPSF6-206ENST00000550987 MKRN1Q9UHC7 482 aaKnown RBP8.88□□□□□ -0.99
CPSF6-206ENST00000550987 NOVA2Q9UNW9 492 aaKnown RBP8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms