RNA–Protein interactions for RNA: ENST00000550880.5

PFDN5-212, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 595 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-212ENST00000550880 COL14A1Q05707 1796 aaKnown RBP16.34■□□□□ 0.21
PFDN5-212ENST00000550880 FAM182BQ5T319 152 aa16.34■□□□□ 0.21
PFDN5-212ENST00000550880 MINK1Q8N4C8 1332 aaPredicted RBP16.34■□□□□ 0.21
PFDN5-212ENST00000550880 WASLO00401 505 aaPredicted RBP16.32■□□□□ 0.2
PFDN5-212ENST00000550880 FAM196AQ6ZSG2 479 aa16.32■□□□□ 0.2
PFDN5-212ENST00000550880 RGPD1P0DJD0 1748 aa16.31■□□□□ 0.2
PFDN5-212ENST00000550880 NRAPQ86VF7 1730 aa16.31■□□□□ 0.2
PFDN5-212ENST00000550880 ADGRB2O60241 1585 aa16.31■□□□□ 0.2
PFDN5-212ENST00000550880 DISP2A7MBM2 1401 aa16.31■□□□□ 0.2
PFDN5-212ENST00000550880 EZH2Q15910 746 aaKnown RBP16.3■□□□□ 0.2
PFDN5-212ENST00000550880 SPATA31A1Q5TZJ5 1347 aa16.29■□□□□ 0.2
PFDN5-212ENST00000550880 PRR36Q9H6K5 1346 aa16.29■□□□□ 0.2
PFDN5-212ENST00000550880 TRIM37O94972 964 aa16.29■□□□□ 0.2
PFDN5-212ENST00000550880 EVA1CP58658 441 aa16.29■□□□□ 0.2
PFDN5-212ENST00000550880 STRN4Q9NRL3 753 aa16.29■□□□□ 0.2
PFDN5-212ENST00000550880 TULP4Q9NRJ4 1543 aa16.29■□□□□ 0.2
PFDN5-212ENST00000550880 TRPM3Q9HCF6 1732 aaPredicted RBP16.28■□□□□ 0.2
PFDN5-212ENST00000550880 APBA3O96018 575 aa16.28■□□□□ 0.2
PFDN5-212ENST00000550880 STAC3Q96MF2 364 aa16.28■□□□□ 0.2
PFDN5-212ENST00000550880 KDM2AQ9Y2K7 1162 aa16.28■□□□□ 0.2
PFDN5-212ENST00000550880 ALS2Q96Q42 1657 aa16.27■□□□□ 0.2
PFDN5-212ENST00000550880 PARD3Q8TEW0 1356 aa16.27■□□□□ 0.2
PFDN5-212ENST00000550880 PDE3BQ13370 1112 aa16.27■□□□□ 0.2
PFDN5-212ENST00000550880 CAMKK2Q96RR4 588 aa16.27■□□□□ 0.2
PFDN5-212ENST00000550880 KIAA0232Q92628 1395 aa16.26■□□□□ 0.19
PFDN5-212ENST00000550880 CHRNA2Q15822 529 aa16.26■□□□□ 0.19
PFDN5-212ENST00000550880 NBPF8Q3BBV2 869 aa16.26■□□□□ 0.19
PFDN5-212ENST00000550880 NBPF14Q5TI25 921 aa16.26■□□□□ 0.19
PFDN5-212ENST00000550880 DCAF11Q8TEB1 546 aa16.26■□□□□ 0.19
PFDN5-212ENST00000550880 USP35Q9P2H5 1018 aa16.26■□□□□ 0.19
PFDN5-212ENST00000550880 ZC3H6P61129 1189 aaKnown RBP16.25■□□□□ 0.19
PFDN5-212ENST00000550880 NUDT16Q96DE0 195 aaKnown RBP16.25■□□□□ 0.19
PFDN5-212ENST00000550880 ADGRB1O14514 1584 aa16.25■□□□□ 0.19
PFDN5-212ENST00000550880 THSD7AQ9UPZ6 1657 aa16.24■□□□□ 0.19
PFDN5-212ENST00000550880 DCAF8L1A6NGE4 600 aa16.23■□□□□ 0.19
PFDN5-212ENST00000550880 BARGINQ6ZT62 677 aa16.23■□□□□ 0.19
PFDN5-212ENST00000550880 NUTM2GQ5VZR2 741 aa16.22■□□□□ 0.19
PFDN5-212ENST00000550880 ATP7BP35670 1465 aa16.22■□□□□ 0.19
PFDN5-212ENST00000550880 TNS1Q9HBL0 1735 aaKnown RBP16.2■□□□□ 0.18
PFDN5-212ENST00000550880 C11orf95C9JLR9 678 aaPredicted RBP16.2■□□□□ 0.18
PFDN5-212ENST00000550880 TCP11L2Q8N4U5 519 aa16.2■□□□□ 0.18
PFDN5-212ENST00000550880 ABTB2Q8N961 1025 aa16.2■□□□□ 0.18
PFDN5-212ENST00000550880 CDK19Q9BWU1 502 aa16.2■□□□□ 0.18
PFDN5-212ENST00000550880 PPP1R1BQ9UD71 204 aaPredicted RBP16.2■□□□□ 0.18
PFDN5-212ENST00000550880 YY1P25490 414 aa16.19■□□□□ 0.18
PFDN5-212ENST00000550880 THRAP3Q9Y2W1 955 aaKnown RBP16.19■□□□□ 0.18
PFDN5-212ENST00000550880 CCDC61Q9Y6R9 512 aa16.19■□□□□ 0.18
PFDN5-212ENST00000550880 SSH2Q76I76 1423 aa16.19■□□□□ 0.18
PFDN5-212ENST00000550880 ITSN1Q15811 1721 aa16.18■□□□□ 0.18
PFDN5-212ENST00000550880 CRYBG1Q9Y4K1 1723 aa16.18■□□□□ 0.18
PFDN5-212ENST00000550880 ACEP12821 1306 aa16.18■□□□□ 0.18
PFDN5-212ENST00000550880 RAB3GAP2Q9H2M9 1393 aa16.17■□□□□ 0.18
PFDN5-212ENST00000550880 LARP1Q6PKG0 1096 aaKnown RBP16.17■□□□□ 0.18
PFDN5-212ENST00000550880 SPON1Q9HCB6 807 aa16.17■□□□□ 0.18
PFDN5-212ENST00000550880 POLR3AO14802 1390 aaPredicted RBP16.16■□□□□ 0.18
PFDN5-212ENST00000550880 NLRP13Q86W25 1043 aa16.16■□□□□ 0.18
PFDN5-212ENST00000550880 PLEKHG3A1L390 1219 aa16.15■□□□□ 0.18
PFDN5-212ENST00000550880 CPDO75976 1380 aa16.14■□□□□ 0.17
PFDN5-212ENST00000550880 KCNQ2O43526 872 aa16.14■□□□□ 0.17
PFDN5-212ENST00000550880 PHRF1Q9P1Y6 1649 aaKnown RBP16.14■□□□□ 0.17
PFDN5-212ENST00000550880 GCP02774 474 aa16.13■□□□□ 0.17
PFDN5-212ENST00000550880 CAMTA1Q9Y6Y1 1673 aa16.11■□□□□ 0.17
PFDN5-212ENST00000550880 SRPK2P78362 688 aaKnown RBP16.11■□□□□ 0.17
PFDN5-212ENST00000550880 USP19O94966 1318 aa16.11■□□□□ 0.17
PFDN5-212ENST00000550880 ZBTB7CA1YPR0 619 aa16.1■□□□□ 0.17
PFDN5-212ENST00000550880 ARHGEF28Q8N1W1 1705 aaKnown RBP16.1■□□□□ 0.17
PFDN5-212ENST00000550880 NINLQ9Y2I6 1382 aa16.1■□□□□ 0.17
PFDN5-212ENST00000550880 RREB1Q92766 1687 aa16.09■□□□□ 0.17
PFDN5-212ENST00000550880 NRKQ7Z2Y5 1582 aa16.09■□□□□ 0.17
PFDN5-212ENST00000550880 PLSCR1O15162 318 aa16.08■□□□□ 0.16
PFDN5-212ENST00000550880 DDB1Q16531 1140 aa16.08■□□□□ 0.16
PFDN5-212ENST00000550880 BRD4O60885 1362 aaPredicted RBP16.08■□□□□ 0.16
PFDN5-212ENST00000550880 OVOS2A0A0G2JMS6 1433 aa16.08■□□□□ 0.16
PFDN5-212ENST00000550880 OVOS2A0A0J9YW53 1432 aa16.08■□□□□ 0.16
PFDN5-212ENST00000550880 CRB1P82279 1406 aa16.08■□□□□ 0.16
PFDN5-212ENST00000550880 OVOS2Q6IE36 1432 aa16.08■□□□□ 0.16
PFDN5-212ENST00000550880 NUP188Q5SRE5 1749 aa16.08■□□□□ 0.16
PFDN5-212ENST00000550880 TOM1L2Q6ZVM7 507 aa16.07■□□□□ 0.16
PFDN5-212ENST00000550880 COL5A2P05997 1499 aaPredicted RBP16.06■□□□□ 0.16
PFDN5-212ENST00000550880 PPIP5K1Q6PFW1 1433 aa16.06■□□□□ 0.16
PFDN5-212ENST00000550880 NLRP6P59044 892 aa16.06■□□□□ 0.16
PFDN5-212ENST00000550880 LMO7Q8WWI1 1683 aa16.05■□□□□ 0.16
PFDN5-212ENST00000550880 CDCA7Q9BWT1 371 aaPredicted RBP16.05■□□□□ 0.16
PFDN5-212ENST00000550880 BCL11BQ9C0K0 894 aaPredicted RBP16.05■□□□□ 0.16
PFDN5-212ENST00000550880 TOPAZ1Q8N9V7 1692 aa16.05■□□□□ 0.16
PFDN5-212ENST00000550880 AATKQ6ZMQ8 1374 aa16.04■□□□□ 0.16
PFDN5-212ENST00000550880 CABP2Q9NPB3 220 aa16.04■□□□□ 0.16
PFDN5-212ENST00000550880 PARP4Q9UKK3 1724 aaKnown RBP16.03■□□□□ 0.16
PFDN5-212ENST00000550880 CENPJQ9HC77 1338 aaPredicted RBP16.03■□□□□ 0.16
PFDN5-212ENST00000550880 CABP1Q9NZU7 370 aa16.02■□□□□ 0.16
PFDN5-212ENST00000550880 NBPF1Q3BBV0 1214 aa16.01■□□□□ 0.15
PFDN5-212ENST00000550880 CSB-PGBD3P0DP91 1061 aa16■□□□□ 0.15
PFDN5-212ENST00000550880 STK32BQ9NY57 414 aa16■□□□□ 0.15
PFDN5-212ENST00000550880 KIAA1210Q9ULL0 1709 aa15.99■□□□□ 0.15
PFDN5-212ENST00000550880 WDR17Q8IZU2 1322 aa15.99■□□□□ 0.15
PFDN5-212ENST00000550880 ZBTB7AO95365 584 aa15.99■□□□□ 0.15
PFDN5-212ENST00000550880 KCNH5Q8NCM2 988 aa15.99■□□□□ 0.15
PFDN5-212ENST00000550880 ANO8Q9HCE9 1232 aaPredicted RBP15.99■□□□□ 0.15
PFDN5-212ENST00000550880 USP6P35125 1406 aa15.99■□□□□ 0.15
PFDN5-212ENST00000550880 RGPD3A6NKT7 1758 aaPredicted RBP15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms