RNA–Protein interactions for RNA: ENST00000550587.5

DEPDC4-209, Transcript of DEP domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene DEPDC4, Length 1,165 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-209ENST00000550587 KDM5DQ9BY66 1539 aa9.25□□□□□ -0.93
DEPDC4-209ENST00000550587 FGD6Q6ZV73 1430 aa9.24□□□□□ -0.93
DEPDC4-209ENST00000550587 C6orf132Q5T0Z8 1188 aa9.24□□□□□ -0.93
DEPDC4-209ENST00000550587 DDX12PQ92771 950 aa9.24□□□□□ -0.93
DEPDC4-209ENST00000550587 RBM33Q96EV2 1170 aaKnown RBP9.24□□□□□ -0.93
DEPDC4-209ENST00000550587 RABGEF1Q9UJ41 708 aa9.24□□□□□ -0.93
DEPDC4-209ENST00000550587 DNMT1P26358 1616 aaKnown RBP9.23□□□□□ -0.93
DEPDC4-209ENST00000550587 MIA2Q96PC5 1412 aa9.23□□□□□ -0.93
DEPDC4-209ENST00000550587 PZPP20742 1482 aa9.23□□□□□ -0.93
DEPDC4-209ENST00000550587 CAMSAP2Q08AD1 1489 aa9.23□□□□□ -0.93
DEPDC4-209ENST00000550587 NLRP1Q9C000 1473 aa9.23□□□□□ -0.93
DEPDC4-209ENST00000550587 CPS1P31327 1500 aa9.23□□□□□ -0.93
DEPDC4-209ENST00000550587 EPAS1Q99814 870 aa9.23□□□□□ -0.93
DEPDC4-209ENST00000550587 FAM50AQ14320 339 aaKnown RBP9.22□□□□□ -0.93
DEPDC4-209ENST00000550587 RTN4Q9NQC3 1192 aaKnown RBP9.22□□□□□ -0.93
DEPDC4-209ENST00000550587 KIAA1468Q9P260 1216 aa9.22□□□□□ -0.93
DEPDC4-209ENST00000550587 UGGT1Q9NYU2 1555 aa9.21□□□□□ -0.93
DEPDC4-209ENST00000550587 AMER1Q5JTC6 1135 aaPredicted RBP9.21□□□□□ -0.94
DEPDC4-209ENST00000550587 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.21□□□□□ -0.94
DEPDC4-209ENST00000550587 POLR1AO95602 1720 aaPredicted RBP9.21□□□□□ -0.94
DEPDC4-209ENST00000550587 SHANK2Q9UPX8 1470 aa9.21□□□□□ -0.94
DEPDC4-209ENST00000550587 CFAP44Q96MT7 982 aa9.2□□□□□ -0.94
DEPDC4-209ENST00000550587 ARHGEF5Q12774 1597 aa9.2□□□□□ -0.94
DEPDC4-209ENST00000550587 BCAMP50895 628 aa9.19□□□□□ -0.94
DEPDC4-209ENST00000550587 PAXIP1Q6ZW49 1069 aaPredicted RBP9.19□□□□□ -0.94
DEPDC4-209ENST00000550587 EID1Q9Y6B2 187 aa9.19□□□□□ -0.94
DEPDC4-209ENST00000550587 NPHP4O75161 1426 aaPredicted RBP9.19□□□□□ -0.94
DEPDC4-209ENST00000550587 PTPN23Q9H3S7 1636 aa9.19□□□□□ -0.94
DEPDC4-209ENST00000550587 HSPA1LP34931 641 aa9.18□□□□□ -0.94
DEPDC4-209ENST00000550587 MED1Q15648 1581 aaPredicted RBP9.18□□□□□ -0.94
DEPDC4-209ENST00000550587 ANKK1Q8NFD2 765 aa9.18□□□□□ -0.94
DEPDC4-209ENST00000550587 SEPT9Q9UHD8 586 aaPredicted RBP9.18□□□□□ -0.94
DEPDC4-209ENST00000550587 KANK1Q14678 1352 aa9.17□□□□□ -0.94
DEPDC4-209ENST00000550587 NBR1Q14596 966 aa9.17□□□□□ -0.94
DEPDC4-209ENST00000550587 TSR1Q2NL82 804 aaKnown RBP9.17□□□□□ -0.94
DEPDC4-209ENST00000550587 ZC3H13Q5T200 1668 aaKnown RBP9.16□□□□□ -0.94
DEPDC4-209ENST00000550587 DEPDC5O75140 1603 aa9.16□□□□□ -0.94
DEPDC4-209ENST00000550587 MED14O60244 1454 aa9.16□□□□□ -0.94
DEPDC4-209ENST00000550587 TRIM6-TRIM34B2RNG4 842 aa9.16□□□□□ -0.94
DEPDC4-209ENST00000550587 ITGAEP38570 1179 aa9.16□□□□□ -0.94
DEPDC4-209ENST00000550587 PDIA6Q15084 440 aa9.16□□□□□ -0.94
DEPDC4-209ENST00000550587 LAPTM4BQ86VI4 370 aa9.16□□□□□ -0.94
DEPDC4-209ENST00000550587 ZFRQ96KR1 1074 aaKnown RBP9.16□□□□□ -0.94
DEPDC4-209ENST00000550587 ONECUT3O60422 494 aaPredicted RBP9.15□□□□□ -0.94
DEPDC4-209ENST00000550587 TXNDC2Q86VQ3 553 aa9.15□□□□□ -0.94
DEPDC4-209ENST00000550587 EIF2AK4Q9P2K8 1649 aaKnown RBP9.15□□□□□ -0.94
DEPDC4-209ENST00000550587 NEURL4Q96JN8 1562 aa9.15□□□□□ -0.95
DEPDC4-209ENST00000550587 IQGAP1P46940 1657 aa9.14□□□□□ -0.95
DEPDC4-209ENST00000550587 SOWAHBA6NEL2 793 aa9.14□□□□□ -0.95
DEPDC4-209ENST00000550587 MAP3K7O43318 606 aa9.14□□□□□ -0.95
DEPDC4-209ENST00000550587 EN1Q05925 392 aaPredicted RBP9.14□□□□□ -0.95
DEPDC4-209ENST00000550587 E2F4Q16254 413 aa9.14□□□□□ -0.95
DEPDC4-209ENST00000550587 IFFO2Q5TF58 517 aa9.14□□□□□ -0.95
DEPDC4-209ENST00000550587 RRP7BPQ9NSQ0 103 aa9.14□□□□□ -0.95
DEPDC4-209ENST00000550587 MAST1Q9Y2H9 1570 aa9.14□□□□□ -0.95
DEPDC4-209ENST00000550587 DUOX2Q9NRD8 1548 aa9.14□□□□□ -0.95
DEPDC4-209ENST00000550587 RNF17Q9BXT8 1623 aaKnown RBP9.13□□□□□ -0.95
DEPDC4-209ENST00000550587 HRCP23327 699 aa9.13□□□□□ -0.95
DEPDC4-209ENST00000550587 ABCC3O15438 1527 aa9.13□□□□□ -0.95
DEPDC4-209ENST00000550587 ERVK-7P63135 1459 aa9.13□□□□□ -0.95
DEPDC4-209ENST00000550587 KIF15Q9NS87 1388 aa9.12□□□□□ -0.95
DEPDC4-209ENST00000550587 CFAP65Q6ZU64 1925 aaKnown RBP9.12□□□□□ -0.95
DEPDC4-209ENST00000550587 SPDYE16A6NNV3 312 aaPredicted RBP9.12□□□□□ -0.95
DEPDC4-209ENST00000550587 PRIM1P49642 420 aaKnown RBP9.12□□□□□ -0.95
DEPDC4-209ENST00000550587 HDGFP51858 240 aaKnown RBP9.12□□□□□ -0.95
DEPDC4-209ENST00000550587 BCANQ96GW7 911 aa9.12□□□□□ -0.95
DEPDC4-209ENST00000550587 TSKSQ9UJT2 592 aa9.12□□□□□ -0.95
DEPDC4-209ENST00000550587 VWDEQ8N2E2 1590 aa9.12□□□□□ -0.95
DEPDC4-209ENST00000550587 SCAF11Q99590 1463 aaKnown RBP9.11□□□□□ -0.95
DEPDC4-209ENST00000550587 A0A0G2JS52 829 aa9.11□□□□□ -0.95
DEPDC4-209ENST00000550587 WDR70Q9NW82 654 aa9.11□□□□□ -0.95
DEPDC4-209ENST00000550587 WBP1LQ9NX94 342 aa9.11□□□□□ -0.95
DEPDC4-209ENST00000550587 ABCC5O15440 1437 aa9.11□□□□□ -0.95
DEPDC4-209ENST00000550587 ERBINQ96RT1 1412 aa9.11□□□□□ -0.95
DEPDC4-209ENST00000550587 SETD5Q9C0A6 1442 aa9.11□□□□□ -0.95
DEPDC4-209ENST00000550587 GRXCR2A6NFK2 248 aa9.1□□□□□ -0.95
DEPDC4-209ENST00000550587 FAM98CQ17RN3 349 aaKnown RBP9.1□□□□□ -0.95
DEPDC4-209ENST00000550587 DAPK1P53355 1430 aa9.1□□□□□ -0.95
DEPDC4-209ENST00000550587 ARHGAP31Q2M1Z3 1444 aa9.1□□□□□ -0.95
DEPDC4-209ENST00000550587 SYNMO15061 1565 aa9.1□□□□□ -0.95
DEPDC4-209ENST00000550587 ROCK1Q13464 1354 aa9.1□□□□□ -0.95
DEPDC4-209ENST00000550587 ANKRD30AQ9BXX3 1397 aa9.1□□□□□ -0.95
DEPDC4-209ENST00000550587 LRRC7Q96NW7 1537 aa9.1□□□□□ -0.95
DEPDC4-209ENST00000550587 CEP152O94986 1710 aa9.09□□□□□ -0.95
DEPDC4-209ENST00000550587 LTKP29376 864 aa9.09□□□□□ -0.95
DEPDC4-209ENST00000550587 CHIC2Q9UKJ5 165 aa9.09□□□□□ -0.95
DEPDC4-209ENST00000550587 HFM1A2PYH4 1435 aa9.08□□□□□ -0.96
DEPDC4-209ENST00000550587 PROSER2Q86WR7 435 aaPredicted RBP9.08□□□□□ -0.96
DEPDC4-209ENST00000550587 UBR1Q8IWV7 1749 aa9.08□□□□□ -0.96
DEPDC4-209ENST00000550587 ACIN1Q9UKV3 1341 aaKnown RBP9.07□□□□□ -0.96
DEPDC4-209ENST00000550587 SLIT1O75093 1534 aa9.07□□□□□ -0.96
DEPDC4-209ENST00000550587 SMAPO00193 183 aa9.07□□□□□ -0.96
DEPDC4-209ENST00000550587 PACS2Q86VP3 889 aa9.07□□□□□ -0.96
DEPDC4-209ENST00000550587 SLC52A1Q9NWF4 448 aa9.07□□□□□ -0.96
DEPDC4-209ENST00000550587 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.07□□□□□ -0.96
DEPDC4-209ENST00000550587 FAM198AQ9UFP1 575 aa9.07□□□□□ -0.96
DEPDC4-209ENST00000550587 ARIH1Q9Y4X5 557 aaPredicted RBP9.07□□□□□ -0.96
DEPDC4-209ENST00000550587 RAB3GAP2Q9H2M9 1393 aa9.07□□□□□ -0.96
DEPDC4-209ENST00000550587 TMEM2Q9UHN6 1383 aa9.07□□□□□ -0.96
DEPDC4-209ENST00000550587 NAIPQ13075 1403 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms