RNA–Protein interactions for RNA: ENST00000550379.1

RNF41-208, Transcript of ring finger protein 41, humanhuman

TSL 3

Gene RNF41, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-208ENST00000550379 BRINP3Q76B58 766 aa10.49□□□□□ -0.73
RNF41-208ENST00000550379 TRPM3Q9HCF6 1732 aaPredicted RBP10.49□□□□□ -0.73
RNF41-208ENST00000550379 INSRP06213 1382 aa10.49□□□□□ -0.73
RNF41-208ENST00000550379 OVOS2A0A0J9YW53 1432 aa10.49□□□□□ -0.73
RNF41-208ENST00000550379 OVOS2Q6IE36 1432 aa10.49□□□□□ -0.73
RNF41-208ENST00000550379 NHSL1Q5SYE7 1610 aa10.48□□□□□ -0.73
RNF41-208ENST00000550379 AHDC1Q5TGY3 1603 aaPredicted RBP10.48□□□□□ -0.73
RNF41-208ENST00000550379 PSME1Q06323 249 aa10.48□□□□□ -0.73
RNF41-208ENST00000550379 ESCO1Q5FWF5 840 aa10.48□□□□□ -0.73
RNF41-208ENST00000550379 NGDNQ8NEJ9 315 aaKnown RBP10.48□□□□□ -0.73
RNF41-208ENST00000550379 CERKQ8TCT0 537 aa10.48□□□□□ -0.73
RNF41-208ENST00000550379 RBM33Q96EV2 1170 aaKnown RBP10.48□□□□□ -0.73
RNF41-208ENST00000550379 ORAI2Q96SN7 254 aa10.48□□□□□ -0.73
RNF41-208ENST00000550379 KIF24Q5T7B8 1368 aa10.48□□□□□ -0.73
RNF41-208ENST00000550379 PXDNQ92626 1479 aa10.48□□□□□ -0.73
RNF41-208ENST00000550379 ALS2Q96Q42 1657 aa10.47□□□□□ -0.73
RNF41-208ENST00000550379 KIF20BQ96Q89 1820 aa10.46□□□□□ -0.74
RNF41-208ENST00000550379 MED1Q15648 1581 aaPredicted RBP10.45□□□□□ -0.74
RNF41-208ENST00000550379 SMG6Q86US8 1419 aaKnown RBP10.45□□□□□ -0.74
RNF41-208ENST00000550379 ARHGEF10O15013 1369 aa10.45□□□□□ -0.74
RNF41-208ENST00000550379 PNPLA6Q8IY17 1366 aa10.45□□□□□ -0.74
RNF41-208ENST00000550379 USP19O94966 1318 aa10.45□□□□□ -0.74
RNF41-208ENST00000550379 MYBBP1AQ9BQG0 1328 aaKnown RBP10.45□□□□□ -0.74
RNF41-208ENST00000550379 FOXO3O43524 673 aa10.45□□□□□ -0.74
RNF41-208ENST00000550379 NLRP13Q86W25 1043 aa10.45□□□□□ -0.74
RNF41-208ENST00000550379 PMFBP1Q8TBY8 1022 aa10.45□□□□□ -0.74
RNF41-208ENST00000550379 POLR3GLQ9BT43 218 aa10.45□□□□□ -0.74
RNF41-208ENST00000550379 PHRF1Q9P1Y6 1649 aaKnown RBP10.44□□□□□ -0.74
RNF41-208ENST00000550379 SPATA31A3Q5VYP0 1347 aa10.44□□□□□ -0.74
RNF41-208ENST00000550379 KRT28Q7Z3Y7 464 aa10.44□□□□□ -0.74
RNF41-208ENST00000550379 PIK3C2AO00443 1686 aa10.44□□□□□ -0.74
RNF41-208ENST00000550379 SLIT3O75094 1523 aa10.43□□□□□ -0.74
RNF41-208ENST00000550379 NUTM2FA1L443 756 aa10.43□□□□□ -0.74
RNF41-208ENST00000550379 MARF1Q9Y4F3 1742 aaKnown RBP10.43□□□□□ -0.74
RNF41-208ENST00000550379 ABCC6O95255 1503 aa10.43□□□□□ -0.74
RNF41-208ENST00000550379 TNS3Q68CZ2 1445 aa10.42□□□□□ -0.74
RNF41-208ENST00000550379 ROBO1Q9Y6N7 1651 aa10.42□□□□□ -0.74
RNF41-208ENST00000550379 KCNH5Q8NCM2 988 aa10.42□□□□□ -0.74
RNF41-208ENST00000550379 COG3Q96JB2 828 aa10.42□□□□□ -0.74
RNF41-208ENST00000550379 PPP2R1AP30153 589 aa10.41□□□□□ -0.74
RNF41-208ENST00000550379 MORC1Q86VD1 984 aa10.41□□□□□ -0.74
RNF41-208ENST00000550379 MIER1Q8N108 512 aa10.41□□□□□ -0.74
RNF41-208ENST00000550379 LRRC59Q96AG4 307 aaKnown RBP10.41□□□□□ -0.74
RNF41-208ENST00000550379 NME9Q86XW9 330 aa10.4□□□□□ -0.74
RNF41-208ENST00000550379 ABTB2Q8N961 1025 aa10.4□□□□□ -0.74
RNF41-208ENST00000550379 COL22A1Q8NFW1 1626 aaPredicted RBP10.4□□□□□ -0.75
RNF41-208ENST00000550379 MAP2P11137 1827 aaKnown RBP10.4□□□□□ -0.75
RNF41-208ENST00000550379 CPDO75976 1380 aa10.39□□□□□ -0.75
RNF41-208ENST00000550379 CRYBG1Q9Y4K1 1723 aa10.39□□□□□ -0.75
RNF41-208ENST00000550379 CDK12Q9NYV4 1490 aaPredicted RBP10.39□□□□□ -0.75
RNF41-208ENST00000550379 CC2D1BQ5T0F9 858 aaKnown RBP10.39□□□□□ -0.75
RNF41-208ENST00000550379 GGNBP2Q9H3C7 697 aa10.39□□□□□ -0.75
RNF41-208ENST00000550379 RTL1A6NKG5 1358 aa10.39□□□□□ -0.75
RNF41-208ENST00000550379 NFAT5O94916 1531 aa10.38□□□□□ -0.75
RNF41-208ENST00000550379 COL16A1Q07092 1604 aaPredicted RBP10.38□□□□□ -0.75
RNF41-208ENST00000550379 NLRP6P59044 892 aa10.38□□□□□ -0.75
RNF41-208ENST00000550379 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.38□□□□□ -0.75
RNF41-208ENST00000550379 POLKQ9UBT6 870 aa10.38□□□□□ -0.75
RNF41-208ENST00000550379 PLEKHG2Q9H7P9 1386 aa10.38□□□□□ -0.75
RNF41-208ENST00000550379 NCBP3Q53F19 620 aaKnown RBP10.37□□□□□ -0.75
RNF41-208ENST00000550379 ARHGEF25Q86VW2 580 aa10.37□□□□□ -0.75
RNF41-208ENST00000550379 PNISRQ8TF01 805 aaKnown RBP10.37□□□□□ -0.75
RNF41-208ENST00000550379 UBAP1LF5GYI3 381 aa10.36□□□□□ -0.75
RNF41-208ENST00000550379 GCP02774 474 aa10.36□□□□□ -0.75
RNF41-208ENST00000550379 COL3A1P02461 1466 aaPredicted RBP10.36□□□□□ -0.75
RNF41-208ENST00000550379 MTHFSP49914 203 aa10.35□□□□□ -0.75
RNF41-208ENST00000550379 FLT4P35916 1363 aa10.35□□□□□ -0.75
RNF41-208ENST00000550379 BLMP54132 1417 aaPredicted RBP10.34□□□□□ -0.75
RNF41-208ENST00000550379 NGEFQ8N5V2 710 aa10.34□□□□□ -0.75
RNF41-208ENST00000550379 IP6K1Q92551 441 aa10.34□□□□□ -0.75
RNF41-208ENST00000550379 CFAP53Q96M91 514 aa10.34□□□□□ -0.75
RNF41-208ENST00000550379 SHPRHQ149N8 1683 aa10.34□□□□□ -0.75
RNF41-208ENST00000550379 MAP3K19Q56UN5 1328 aa10.33□□□□□ -0.76
RNF41-208ENST00000550379 NCAPD2Q15021 1401 aa10.33□□□□□ -0.76
RNF41-208ENST00000550379 PHLPP1O60346 1717 aa10.33□□□□□ -0.76
RNF41-208ENST00000550379 PAK3O75914 559 aaPredicted RBP10.33□□□□□ -0.76
RNF41-208ENST00000550379 ZRANB1Q9UGI0 708 aa10.33□□□□□ -0.76
RNF41-208ENST00000550379 COL18A1P39060 1754 aa10.33□□□□□ -0.76
RNF41-208ENST00000550379 JCADQ9P266 1359 aa10.32□□□□□ -0.76
RNF41-208ENST00000550379 DDX17Q92841 729 aaKnown RBP10.32□□□□□ -0.76
RNF41-208ENST00000550379 ABCA3Q99758 1704 aa10.32□□□□□ -0.76
RNF41-208ENST00000550379 SPATA31A6Q5VVP1 1343 aa10.32□□□□□ -0.76
RNF41-208ENST00000550379 MRS2Q9HD23 443 aa10.31□□□□□ -0.76
RNF41-208ENST00000550379 PEAK1Q9H792 1746 aa10.3□□□□□ -0.76
RNF41-208ENST00000550379 KDRP35968 1356 aa10.3□□□□□ -0.76
RNF41-208ENST00000550379 LTN1O94822 1766 aa10.3□□□□□ -0.76
RNF41-208ENST00000550379 FCHSD2O94868 740 aa10.3□□□□□ -0.76
RNF41-208ENST00000550379 HOXC9P31274 260 aa10.3□□□□□ -0.76
RNF41-208ENST00000550379 IL13P35225 146 aa10.3□□□□□ -0.76
RNF41-208ENST00000550379 XPCQ01831 940 aaPredicted RBP10.3□□□□□ -0.76
RNF41-208ENST00000550379 CCDC184Q52MB2 194 aa10.3□□□□□ -0.76
RNF41-208ENST00000550379 NUDCQ9Y266 331 aa10.3□□□□□ -0.76
RNF41-208ENST00000550379 LMO7Q8WWI1 1683 aa10.3□□□□□ -0.76
RNF41-208ENST00000550379 RGPD1P0DJD0 1748 aa10.3□□□□□ -0.76
RNF41-208ENST00000550379 DIAPH1O60610 1272 aaKnown RBP10.29□□□□□ -0.76
RNF41-208ENST00000550379 PNNQ9H307 717 aaKnown RBP10.29□□□□□ -0.76
RNF41-208ENST00000550379 EMILIN1Q9Y6C2 1016 aa10.29□□□□□ -0.76
RNF41-208ENST00000550379 FAM208AQ9UK61 1670 aaKnown RBP10.28□□□□□ -0.76
RNF41-208ENST00000550379 IGSF1Q8N6C5 1336 aa10.28□□□□□ -0.76
RNF41-208ENST00000550379 CAMTA1Q9Y6Y1 1673 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms