RNA–Protein interactions for RNA: ENST00000549818.5

TUBA1C-206, Transcript of tubulin alpha 1c, humanhuman

TSL 4

Gene TUBA1C, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1C-206ENST00000549818 TMC1Q8TDI8 760 aa13.24□□□□□ -0.29
TUBA1C-206ENST00000549818 CRYBG1Q9Y4K1 1723 aa13.24□□□□□ -0.29
TUBA1C-206ENST00000549818 TNS3Q68CZ2 1445 aa13.23□□□□□ -0.29
TUBA1C-206ENST00000549818 KIF7Q2M1P5 1343 aa13.23□□□□□ -0.29
TUBA1C-206ENST00000549818 NUTM2GQ5VZR2 741 aa13.23□□□□□ -0.29
TUBA1C-206ENST00000549818 PIK3C2AO00443 1686 aa13.22□□□□□ -0.29
TUBA1C-206ENST00000549818 PHRF1Q9P1Y6 1649 aaKnown RBP13.22□□□□□ -0.29
TUBA1C-206ENST00000549818 SLC12A5Q9H2X9 1139 aa13.22□□□□□ -0.29
TUBA1C-206ENST00000549818 NINLQ9Y2I6 1382 aa13.21□□□□□ -0.29
TUBA1C-206ENST00000549818 WASHC2AQ641Q2 1341 aa13.21□□□□□ -0.29
TUBA1C-206ENST00000549818 CABLES1Q8TDN4 633 aa13.21□□□□□ -0.29
TUBA1C-206ENST00000549818 LRRC59Q96AG4 307 aaKnown RBP13.21□□□□□ -0.29
TUBA1C-206ENST00000549818 ZNF692Q9BU19 519 aaPredicted RBP13.21□□□□□ -0.29
TUBA1C-206ENST00000549818 CD163L1Q9NR16 1453 aa13.21□□□□□ -0.3
TUBA1C-206ENST00000549818 POLR3AO14802 1390 aaPredicted RBP13.2□□□□□ -0.3
TUBA1C-206ENST00000549818 CCDC7Q96M83 1385 aa13.2□□□□□ -0.3
TUBA1C-206ENST00000549818 SPATA31A3Q5VYP0 1347 aa13.2□□□□□ -0.3
TUBA1C-206ENST00000549818 ZNF316A6NFI3 1004 aaPredicted RBP13.2□□□□□ -0.3
TUBA1C-206ENST00000549818 TERF2IPQ9NYB0 399 aa13.2□□□□□ -0.3
TUBA1C-206ENST00000549818 ADAMTS2O95450 1211 aa13.19□□□□□ -0.3
TUBA1C-206ENST00000549818 USP6P35125 1406 aa13.19□□□□□ -0.3
TUBA1C-206ENST00000549818 PLCH1Q4KWH8 1693 aa13.18□□□□□ -0.3
TUBA1C-206ENST00000549818 KIF20BQ96Q89 1820 aa13.18□□□□□ -0.3
TUBA1C-206ENST00000549818 MEX3CQ5U5Q3 659 aaKnown RBP13.18□□□□□ -0.3
TUBA1C-206ENST00000549818 HDGFL2Q7Z4V5 671 aaPredicted RBP13.18□□□□□ -0.3
TUBA1C-206ENST00000549818 SBNO1A3KN83 1393 aa13.18□□□□□ -0.3
TUBA1C-206ENST00000549818 A0A1W2PP64 1363 aa13.17□□□□□ -0.3
TUBA1C-206ENST00000549818 KTN1Q86UP2 1357 aaKnown RBP13.17□□□□□ -0.3
TUBA1C-206ENST00000549818 CPSF1Q10570 1443 aaKnown RBP13.16□□□□□ -0.3
TUBA1C-206ENST00000549818 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.16□□□□□ -0.3
TUBA1C-206ENST00000549818 SPATA31A6Q5VVP1 1343 aa13.15□□□□□ -0.3
TUBA1C-206ENST00000549818 MSH5O43196 834 aa13.15□□□□□ -0.3
TUBA1C-206ENST00000549818 HAP1P54257 671 aaPredicted RBP13.15□□□□□ -0.3
TUBA1C-206ENST00000549818 C8orf37Q96NL8 207 aa13.15□□□□□ -0.3
TUBA1C-206ENST00000549818 PANK3Q9H999 370 aa13.15□□□□□ -0.3
TUBA1C-206ENST00000549818 ZRANB1Q9UGI0 708 aa13.15□□□□□ -0.3
TUBA1C-206ENST00000549818 BRD4O60885 1362 aaPredicted RBP13.15□□□□□ -0.3
TUBA1C-206ENST00000549818 ANKRD36BQ8N2N9 1353 aa13.15□□□□□ -0.3
TUBA1C-206ENST00000549818 RGPD5Q99666 1765 aa13.15□□□□□ -0.31
TUBA1C-206ENST00000549818 ARHGEF10O15013 1369 aa13.14□□□□□ -0.31
TUBA1C-206ENST00000549818 SOX12O15370 315 aa13.13□□□□□ -0.31
TUBA1C-206ENST00000549818 ABTB2Q8N961 1025 aa13.13□□□□□ -0.31
TUBA1C-206ENST00000549818 CARD14Q9BXL6 1004 aa13.13□□□□□ -0.31
TUBA1C-206ENST00000549818 LTN1O94822 1766 aa13.12□□□□□ -0.31
TUBA1C-206ENST00000549818 ZBTB7CA1YPR0 619 aa13.12□□□□□ -0.31
TUBA1C-206ENST00000549818 NME9Q86XW9 330 aa13.12□□□□□ -0.31
TUBA1C-206ENST00000549818 SSH2Q76I76 1423 aa13.12□□□□□ -0.31
TUBA1C-206ENST00000549818 TTC21BQ7Z4L5 1316 aa13.12□□□□□ -0.31
TUBA1C-206ENST00000549818 USP54Q70EL1 1684 aa13.1□□□□□ -0.31
TUBA1C-206ENST00000549818 PER1O15534 1290 aaPredicted RBP13.1□□□□□ -0.31
TUBA1C-206ENST00000549818 DDX10Q13206 875 aaKnown RBP13.1□□□□□ -0.31
TUBA1C-206ENST00000549818 RGS17Q9UGC6 210 aaPredicted RBP13.1□□□□□ -0.31
TUBA1C-206ENST00000549818 EDC4Q6P2E9 1401 aaKnown RBP13.1□□□□□ -0.31
TUBA1C-206ENST00000549818 NSD3Q9BZ95 1437 aa13.1□□□□□ -0.31
TUBA1C-206ENST00000549818 NRAPQ86VF7 1730 aa13.1□□□□□ -0.31
TUBA1C-206ENST00000549818 AFF2P51816 1311 aa13.1□□□□□ -0.31
TUBA1C-206ENST00000549818 TTC21AQ8NDW8 1320 aa13.1□□□□□ -0.31
TUBA1C-206ENST00000549818 NLRP6P59044 892 aa13.09□□□□□ -0.31
TUBA1C-206ENST00000549818 KNSTRNQ9Y448 316 aa13.09□□□□□ -0.31
TUBA1C-206ENST00000549818 COL14A1Q05707 1796 aaKnown RBP13.09□□□□□ -0.31
TUBA1C-206ENST00000549818 SLIT3O75094 1523 aa13.08□□□□□ -0.31
TUBA1C-206ENST00000549818 ANKRD26Q9UPS8 1709 aa13.08□□□□□ -0.32
TUBA1C-206ENST00000549818 ZC3H6P61129 1189 aaKnown RBP13.08□□□□□ -0.32
TUBA1C-206ENST00000549818 CHRNA2Q15822 529 aa13.08□□□□□ -0.32
TUBA1C-206ENST00000549818 NGLY1Q96IV0 654 aa13.08□□□□□ -0.32
TUBA1C-206ENST00000549818 NWD2Q9ULI1 1742 aa13.08□□□□□ -0.32
TUBA1C-206ENST00000549818 FYB1O15117 783 aa13.07□□□□□ -0.32
TUBA1C-206ENST00000549818 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.07□□□□□ -0.32
TUBA1C-206ENST00000549818 KIAA0232Q92628 1395 aa13.07□□□□□ -0.32
TUBA1C-206ENST00000549818 POTEAQ6S8J7 498 aa13.06□□□□□ -0.32
TUBA1C-206ENST00000549818 NLRP13Q86W25 1043 aa13.06□□□□□ -0.32
TUBA1C-206ENST00000549818 NFAT5O94916 1531 aa13.06□□□□□ -0.32
TUBA1C-206ENST00000549818 USP19O94966 1318 aa13.06□□□□□ -0.32
TUBA1C-206ENST00000549818 CGNL1Q0VF96 1302 aa13.06□□□□□ -0.32
TUBA1C-206ENST00000549818 COL18A1P39060 1754 aa13.05□□□□□ -0.32
TUBA1C-206ENST00000549818 FAM83GA6ND36 823 aa13.05□□□□□ -0.32
TUBA1C-206ENST00000549818 FBLN1P23142 703 aa13.05□□□□□ -0.32
TUBA1C-206ENST00000549818 CNGB1Q14028 1251 aaPredicted RBP13.05□□□□□ -0.32
TUBA1C-206ENST00000549818 GGNBP2Q9H3C7 697 aa13.05□□□□□ -0.32
TUBA1C-206ENST00000549818 LMO7Q8WWI1 1683 aa13.05□□□□□ -0.32
TUBA1C-206ENST00000549818 AMER1Q5JTC6 1135 aaPredicted RBP13.04□□□□□ -0.32
TUBA1C-206ENST00000549818 ILDR2Q71H61 639 aa13.04□□□□□ -0.32
TUBA1C-206ENST00000549818 PRDM11Q9NQV5 511 aa13.04□□□□□ -0.32
TUBA1C-206ENST00000549818 USP31Q70CQ4 1352 aa13.04□□□□□ -0.32
TUBA1C-206ENST00000549818 RGPD2P0DJD1 1756 aa13.04□□□□□ -0.32
TUBA1C-206ENST00000549818 MAP2P11137 1827 aaKnown RBP13.04□□□□□ -0.32
TUBA1C-206ENST00000549818 OVOS2A0A0J9YW53 1432 aa13.04□□□□□ -0.32
TUBA1C-206ENST00000549818 OVOS2Q6IE36 1432 aa13.04□□□□□ -0.32
TUBA1C-206ENST00000549818 GCP02774 474 aa13.03□□□□□ -0.32
TUBA1C-206ENST00000549818 COG3Q96JB2 828 aa13.03□□□□□ -0.32
TUBA1C-206ENST00000549818 USP21Q9UK80 565 aa13.03□□□□□ -0.32
TUBA1C-206ENST00000549818 SLIT2O94813 1529 aa13.03□□□□□ -0.32
TUBA1C-206ENST00000549818 NPC1L1Q9UHC9 1359 aa13.02□□□□□ -0.33
TUBA1C-206ENST00000549818 BCL9LQ86UU0 1499 aa13.02□□□□□ -0.33
TUBA1C-206ENST00000549818 STRN4Q9NRL3 753 aa13.01□□□□□ -0.33
TUBA1C-206ENST00000549818 BTG4Q9NY30 223 aa13.01□□□□□ -0.33
TUBA1C-206ENST00000549818 NSD2O96028 1365 aa13.01□□□□□ -0.33
TUBA1C-206ENST00000549818 GLI3P10071 1580 aa13.01□□□□□ -0.33
TUBA1C-206ENST00000549818 CAMTA1Q9Y6Y1 1673 aa13.01□□□□□ -0.33
TUBA1C-206ENST00000549818 PEAK1Q9H792 1746 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms