RNA–Protein interactions for RNA: ENST00000549490.1

UBE2N-203, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 2

Gene UBE2N, Length 676 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-203ENST00000549490 NBPF8Q3BBV2 869 aa13.43□□□□□ -0.26
UBE2N-203ENST00000549490 NBPF14Q5TI25 921 aa13.43□□□□□ -0.26
UBE2N-203ENST00000549490 SPON1Q9HCB6 807 aa13.43□□□□□ -0.26
UBE2N-203ENST00000549490 PRDM11Q9NQV5 511 aa13.43□□□□□ -0.26
UBE2N-203ENST00000549490 COL14A1Q05707 1796 aaKnown RBP13.43□□□□□ -0.26
UBE2N-203ENST00000549490 ANKARQ7Z5J8 1434 aa13.42□□□□□ -0.26
UBE2N-203ENST00000549490 KCNQ2O43526 872 aa13.42□□□□□ -0.26
UBE2N-203ENST00000549490 GPRASP1Q5JY77 1395 aa13.42□□□□□ -0.26
UBE2N-203ENST00000549490 ACIN1Q9UKV3 1341 aaKnown RBP13.41□□□□□ -0.26
UBE2N-203ENST00000549490 ADGRB2O60241 1585 aa13.41□□□□□ -0.26
UBE2N-203ENST00000549490 RGPD8O14715 1765 aaPredicted RBP13.41□□□□□ -0.26
UBE2N-203ENST00000549490 CFAP70Q5T0N1 1121 aa13.41□□□□□ -0.26
UBE2N-203ENST00000549490 DHX57Q6P158 1386 aaKnown RBP13.41□□□□□ -0.26
UBE2N-203ENST00000549490 NINLQ9Y2I6 1382 aa13.41□□□□□ -0.26
UBE2N-203ENST00000549490 STRN4Q9NRL3 753 aa13.4□□□□□ -0.26
UBE2N-203ENST00000549490 POGKQ9P215 609 aa13.4□□□□□ -0.26
UBE2N-203ENST00000549490 IFT172Q9UG01 1749 aa13.39□□□□□ -0.27
UBE2N-203ENST00000549490 PDE3BQ13370 1112 aa13.39□□□□□ -0.27
UBE2N-203ENST00000549490 CHRNA2Q15822 529 aa13.39□□□□□ -0.27
UBE2N-203ENST00000549490 PRR36Q9H6K5 1346 aa13.39□□□□□ -0.27
UBE2N-203ENST00000549490 KIAA0232Q92628 1395 aa13.38□□□□□ -0.27
UBE2N-203ENST00000549490 PAK3O75914 559 aaPredicted RBP13.38□□□□□ -0.27
UBE2N-203ENST00000549490 USP35Q9P2H5 1018 aa13.38□□□□□ -0.27
UBE2N-203ENST00000549490 TRPM3Q9HCF6 1732 aaPredicted RBP13.38□□□□□ -0.27
UBE2N-203ENST00000549490 BARGINQ6ZT62 677 aa13.37□□□□□ -0.27
UBE2N-203ENST00000549490 ZNF784Q8NCA9 323 aaPredicted RBP13.37□□□□□ -0.27
UBE2N-203ENST00000549490 HIRIP3Q9BW71 556 aaPredicted RBP13.37□□□□□ -0.27
UBE2N-203ENST00000549490 ALS2Q96Q42 1657 aa13.37□□□□□ -0.27
UBE2N-203ENST00000549490 ZC3H6P61129 1189 aaKnown RBP13.36□□□□□ -0.27
UBE2N-203ENST00000549490 NGDNQ8NEJ9 315 aaKnown RBP13.36□□□□□ -0.27
UBE2N-203ENST00000549490 RREB1Q92766 1687 aa13.35□□□□□ -0.27
UBE2N-203ENST00000549490 NUP188Q5SRE5 1749 aa13.34□□□□□ -0.27
UBE2N-203ENST00000549490 EVA1CP58658 441 aa13.34□□□□□ -0.27
UBE2N-203ENST00000549490 MINK1Q8N4C8 1332 aaPredicted RBP13.34□□□□□ -0.27
UBE2N-203ENST00000549490 SENP3-EIF4A1A0A087X0R7 540 aa13.33□□□□□ -0.28
UBE2N-203ENST00000549490 WASLO00401 505 aaPredicted RBP13.33□□□□□ -0.28
UBE2N-203ENST00000549490 LARP1Q6PKG0 1096 aaKnown RBP13.33□□□□□ -0.28
UBE2N-203ENST00000549490 MPHOSPH9Q99550 1183 aa13.33□□□□□ -0.28
UBE2N-203ENST00000549490 DLC1Q96QB1 1528 aa13.33□□□□□ -0.28
UBE2N-203ENST00000549490 EIF3AQ14152 1382 aaKnown RBP13.32□□□□□ -0.28
UBE2N-203ENST00000549490 SSH2Q76I76 1423 aa13.32□□□□□ -0.28
UBE2N-203ENST00000549490 NUTM2GQ5VZR2 741 aa13.32□□□□□ -0.28
UBE2N-203ENST00000549490 TCP11L2Q8N4U5 519 aa13.32□□□□□ -0.28
UBE2N-203ENST00000549490 TRAK1Q9UPV9 953 aa13.32□□□□□ -0.28
UBE2N-203ENST00000549490 CRYBG1Q9Y4K1 1723 aa13.31□□□□□ -0.28
UBE2N-203ENST00000549490 PDGFDQ9GZP0 370 aaPredicted RBP13.31□□□□□ -0.28
UBE2N-203ENST00000549490 ANO8Q9HCE9 1232 aaPredicted RBP13.31□□□□□ -0.28
UBE2N-203ENST00000549490 TULP4Q9NRJ4 1543 aa13.3□□□□□ -0.28
UBE2N-203ENST00000549490 UTRNP46939 3433 aa13.3□□□□□ -0.28
UBE2N-203ENST00000549490 C1QTNF8P60827 252 aa13.3□□□□□ -0.28
UBE2N-203ENST00000549490 IFFO2Q5TF58 517 aa13.3□□□□□ -0.28
UBE2N-203ENST00000549490 CAMTA1Q9Y6Y1 1673 aa13.3□□□□□ -0.28
UBE2N-203ENST00000549490 PLSCR1O15162 318 aa13.29□□□□□ -0.28
UBE2N-203ENST00000549490 ZBTB7AO95365 584 aa13.29□□□□□ -0.28
UBE2N-203ENST00000549490 PTGER2P43116 358 aa13.29□□□□□ -0.28
UBE2N-203ENST00000549490 THRAP3Q9Y2W1 955 aaKnown RBP13.29□□□□□ -0.28
UBE2N-203ENST00000549490 C11orf95C9JLR9 678 aaPredicted RBP13.28□□□□□ -0.28
UBE2N-203ENST00000549490 PTF1AQ7RTS3 328 aa13.27□□□□□ -0.29
UBE2N-203ENST00000549490 NUDT16Q96DE0 195 aaKnown RBP13.27□□□□□ -0.29
UBE2N-203ENST00000549490 ADGRB1O14514 1584 aa13.26□□□□□ -0.29
UBE2N-203ENST00000549490 PROM2Q8N271 834 aa13.26□□□□□ -0.29
UBE2N-203ENST00000549490 BCL11BQ9C0K0 894 aaPredicted RBP13.26□□□□□ -0.29
UBE2N-203ENST00000549490 ATF5Q9Y2D1 282 aaPredicted RBP13.26□□□□□ -0.29
UBE2N-203ENST00000549490 NRKQ7Z2Y5 1582 aa13.25□□□□□ -0.29
UBE2N-203ENST00000549490 CPDO75976 1380 aa13.25□□□□□ -0.29
UBE2N-203ENST00000549490 SYT17Q9BSW7 474 aa13.25□□□□□ -0.29
UBE2N-203ENST00000549490 FHDC1Q9C0D6 1143 aaPredicted RBP13.25□□□□□ -0.29
UBE2N-203ENST00000549490 ATP7BP35670 1465 aa13.24□□□□□ -0.29
UBE2N-203ENST00000549490 OVOS2A0A0G2JMS6 1433 aa13.24□□□□□ -0.29
UBE2N-203ENST00000549490 OVOS2A0A0J9YW53 1432 aa13.24□□□□□ -0.29
UBE2N-203ENST00000549490 OVOS2Q6IE36 1432 aa13.24□□□□□ -0.29
UBE2N-203ENST00000549490 PHRF1Q9P1Y6 1649 aaKnown RBP13.24□□□□□ -0.29
UBE2N-203ENST00000549490 ABTB2Q8N961 1025 aa13.23□□□□□ -0.29
UBE2N-203ENST00000549490 CASZ1Q86V15 1759 aa13.22□□□□□ -0.29
UBE2N-203ENST00000549490 USP19O94966 1318 aa13.22□□□□□ -0.29
UBE2N-203ENST00000549490 ACEP12821 1306 aa13.22□□□□□ -0.29
UBE2N-203ENST00000549490 POLR3AO14802 1390 aaPredicted RBP13.21□□□□□ -0.29
UBE2N-203ENST00000549490 GCP02774 474 aa13.21□□□□□ -0.29
UBE2N-203ENST00000549490 DDB1Q16531 1140 aa13.21□□□□□ -0.29
UBE2N-203ENST00000549490 CDK19Q9BWU1 502 aa13.21□□□□□ -0.29
UBE2N-203ENST00000549490 COL5A2P05997 1499 aaPredicted RBP13.21□□□□□ -0.3
UBE2N-203ENST00000549490 LMO7Q8WWI1 1683 aa13.21□□□□□ -0.3
UBE2N-203ENST00000549490 PLEKHG3A1L390 1219 aa13.2□□□□□ -0.3
UBE2N-203ENST00000549490 SLC15A2Q16348 729 aa13.2□□□□□ -0.3
UBE2N-203ENST00000549490 SGIP1Q9BQI5 828 aa13.2□□□□□ -0.3
UBE2N-203ENST00000549490 MTFR1LQ9H019 292 aa13.2□□□□□ -0.3
UBE2N-203ENST00000549490 STK32BQ9NY57 414 aa13.2□□□□□ -0.3
UBE2N-203ENST00000549490 CCDC61Q9Y6R9 512 aa13.2□□□□□ -0.3
UBE2N-203ENST00000549490 MYOM1P52179 1685 aa13.2□□□□□ -0.3
UBE2N-203ENST00000549490 CRB1P82279 1406 aa13.2□□□□□ -0.3
UBE2N-203ENST00000549490 PEAK1Q9H792 1746 aa13.19□□□□□ -0.3
UBE2N-203ENST00000549490 TXNRD1Q16881 649 aa13.19□□□□□ -0.3
UBE2N-203ENST00000549490 NLRP13Q86W25 1043 aa13.19□□□□□ -0.3
UBE2N-203ENST00000549490 MARCH10Q8NA82 808 aaPredicted RBP13.19□□□□□ -0.3
UBE2N-203ENST00000549490 KDM2AQ9Y2K7 1162 aa13.19□□□□□ -0.3
UBE2N-203ENST00000549490 PARP4Q9UKK3 1724 aaKnown RBP13.19□□□□□ -0.3
UBE2N-203ENST00000549490 CEP350Q5VT06 3117 aa13.18□□□□□ -0.3
UBE2N-203ENST00000549490 RGPD3A6NKT7 1758 aaPredicted RBP13.17□□□□□ -0.3
UBE2N-203ENST00000549490 RGPD4Q7Z3J3 1758 aa13.17□□□□□ -0.3
UBE2N-203ENST00000549490 ZBTB7CA1YPR0 619 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms