RNA–Protein interactions for RNA: ENST00000549249.5

DEPDC4-207, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-207ENST00000549249 EVC2Q86UK5 1308 aa11.2□□□□□ -0.62
DEPDC4-207ENST00000549249 ZNF335Q9H4Z2 1342 aaPredicted RBP11.2□□□□□ -0.62
DEPDC4-207ENST00000549249 SLC24A1O60721 1099 aa11.2□□□□□ -0.62
DEPDC4-207ENST00000549249 KCNA6P17658 529 aa11.2□□□□□ -0.62
DEPDC4-207ENST00000549249 CDCA8Q53HL2 280 aa11.19□□□□□ -0.62
DEPDC4-207ENST00000549249 KLHL34Q8N239 644 aa11.19□□□□□ -0.62
DEPDC4-207ENST00000549249 TOPAZ1Q8N9V7 1692 aa11.18□□□□□ -0.62
DEPDC4-207ENST00000549249 ATMINO43313 823 aaPredicted RBP11.18□□□□□ -0.62
DEPDC4-207ENST00000549249 PUS7Q96PZ0 661 aaKnown RBP11.18□□□□□ -0.62
DEPDC4-207ENST00000549249 USP32Q8NFA0 1604 aa11.17□□□□□ -0.62
DEPDC4-207ENST00000549249 C7P10643 843 aa11.17□□□□□ -0.62
DEPDC4-207ENST00000549249 SLC39A7Q92504 469 aa11.17□□□□□ -0.62
DEPDC4-207ENST00000549249 CABP2Q9NPB3 220 aa11.17□□□□□ -0.62
DEPDC4-207ENST00000549249 METRNQ9UJH8 293 aa11.17□□□□□ -0.62
DEPDC4-207ENST00000549249 RGPD8O14715 1765 aaPredicted RBP11.17□□□□□ -0.62
DEPDC4-207ENST00000549249 FMN2Q9NZ56 1722 aa11.16□□□□□ -0.62
DEPDC4-207ENST00000549249 CDK19Q9BWU1 502 aa11.16□□□□□ -0.62
DEPDC4-207ENST00000549249 CCDC61Q9Y6R9 512 aa11.16□□□□□ -0.62
DEPDC4-207ENST00000549249 LTBP4Q8N2S1 1624 aa11.16□□□□□ -0.62
DEPDC4-207ENST00000549249 ATAD2Q6PL18 1390 aa11.16□□□□□ -0.62
DEPDC4-207ENST00000549249 NKTRP30414 1462 aaKnown RBP11.15□□□□□ -0.62
DEPDC4-207ENST00000549249 ATP7BP35670 1465 aa11.15□□□□□ -0.62
DEPDC4-207ENST00000549249 XIRP1Q702N8 1843 aaKnown RBP11.15□□□□□ -0.62
DEPDC4-207ENST00000549249 WASLO00401 505 aaPredicted RBP11.15□□□□□ -0.62
DEPDC4-207ENST00000549249 PER1O15534 1290 aaPredicted RBP11.15□□□□□ -0.62
DEPDC4-207ENST00000549249 TOM1O60784 492 aa11.15□□□□□ -0.62
DEPDC4-207ENST00000549249 RASEFQ8IZ41 740 aa11.15□□□□□ -0.62
DEPDC4-207ENST00000549249 PANK3Q9H999 370 aa11.15□□□□□ -0.62
DEPDC4-207ENST00000549249 CDC42BPGQ6DT37 1551 aa11.15□□□□□ -0.62
DEPDC4-207ENST00000549249 CD163L1Q9NR16 1453 aa11.14□□□□□ -0.63
DEPDC4-207ENST00000549249 AKAP12Q02952 1782 aa11.14□□□□□ -0.63
DEPDC4-207ENST00000549249 SRPK2P78362 688 aaKnown RBP11.14□□□□□ -0.63
DEPDC4-207ENST00000549249 PLSCR2Q9NRY7 297 aa11.14□□□□□ -0.63
DEPDC4-207ENST00000549249 PRR36Q9H6K5 1346 aa11.13□□□□□ -0.63
DEPDC4-207ENST00000549249 ITSN1Q15811 1721 aa11.13□□□□□ -0.63
DEPDC4-207ENST00000549249 SOCS7O14512 581 aa11.13□□□□□ -0.63
DEPDC4-207ENST00000549249 SLC12A5Q9H2X9 1139 aa11.13□□□□□ -0.63
DEPDC4-207ENST00000549249 NINLQ9Y2I6 1382 aa11.13□□□□□ -0.63
DEPDC4-207ENST00000549249 ADGRL3Q9HAR2 1447 aa11.12□□□□□ -0.63
DEPDC4-207ENST00000549249 ANP32CO43423 234 aa11.12□□□□□ -0.63
DEPDC4-207ENST00000549249 CARD14Q9BXL6 1004 aa11.12□□□□□ -0.63
DEPDC4-207ENST00000549249 ANKRD36BQ8N2N9 1353 aa11.12□□□□□ -0.63
DEPDC4-207ENST00000549249 MON2Q7Z3U7 1717 aa11.12□□□□□ -0.63
DEPDC4-207ENST00000549249 NUBP1P53384 320 aa11.11□□□□□ -0.63
DEPDC4-207ENST00000549249 ILDR2Q71H61 639 aa11.11□□□□□ -0.63
DEPDC4-207ENST00000549249 IFNLR1Q8IU57 520 aaPredicted RBP11.11□□□□□ -0.63
DEPDC4-207ENST00000549249 TMC1Q8TDI8 760 aa11.11□□□□□ -0.63
DEPDC4-207ENST00000549249 RBM33Q96EV2 1170 aaKnown RBP11.11□□□□□ -0.63
DEPDC4-207ENST00000549249 KIF12Q96FN5 646 aa11.11□□□□□ -0.63
DEPDC4-207ENST00000549249 PRKRIP1Q9H875 184 aaPredicted RBP11.11□□□□□ -0.63
DEPDC4-207ENST00000549249 NSD3Q9BZ95 1437 aa11.1□□□□□ -0.63
DEPDC4-207ENST00000549249 PIP4K2BP78356 416 aa11.1□□□□□ -0.63
DEPDC4-207ENST00000549249 A0A1W2PP64 1363 aa11.1□□□□□ -0.63
DEPDC4-207ENST00000549249 PPIP5K1Q6PFW1 1433 aa11.09□□□□□ -0.63
DEPDC4-207ENST00000549249 ANKRD26Q9UPS8 1709 aa11.09□□□□□ -0.63
DEPDC4-207ENST00000549249 KIF20BQ96Q89 1820 aa11.09□□□□□ -0.63
DEPDC4-207ENST00000549249 NRKQ7Z2Y5 1582 aa11.09□□□□□ -0.63
DEPDC4-207ENST00000549249 AMER1Q5JTC6 1135 aaPredicted RBP11.09□□□□□ -0.63
DEPDC4-207ENST00000549249 NUDT16Q96DE0 195 aaKnown RBP11.09□□□□□ -0.63
DEPDC4-207ENST00000549249 CPSF1Q10570 1443 aaKnown RBP11.09□□□□□ -0.63
DEPDC4-207ENST00000549249 ANKARQ7Z5J8 1434 aa11.09□□□□□ -0.63
DEPDC4-207ENST00000549249 PARD3Q8TEW0 1356 aa11.08□□□□□ -0.64
DEPDC4-207ENST00000549249 NPC1L1Q9UHC9 1359 aa11.08□□□□□ -0.64
DEPDC4-207ENST00000549249 ATN1P54259 1190 aaPredicted RBP11.08□□□□□ -0.64
DEPDC4-207ENST00000549249 CABP1Q9NZU7 370 aa11.08□□□□□ -0.64
DEPDC4-207ENST00000549249 TMEM94Q12767 1356 aa11.07□□□□□ -0.64
DEPDC4-207ENST00000549249 KTN1Q86UP2 1357 aaKnown RBP11.07□□□□□ -0.64
DEPDC4-207ENST00000549249 NUTM2FA1L443 756 aa11.07□□□□□ -0.64
DEPDC4-207ENST00000549249 CNGB1Q14028 1251 aaPredicted RBP11.07□□□□□ -0.64
DEPDC4-207ENST00000549249 MAMSTRQ6ZN01 415 aa11.07□□□□□ -0.64
DEPDC4-207ENST00000549249 PROSER2Q86WR7 435 aaPredicted RBP11.07□□□□□ -0.64
DEPDC4-207ENST00000549249 LRRC7Q96NW7 1537 aa11.07□□□□□ -0.64
DEPDC4-207ENST00000549249 CCER2I3L3R5 266 aa11.06□□□□□ -0.64
DEPDC4-207ENST00000549249 FAM212AQ96EL1 285 aa11.06□□□□□ -0.64
DEPDC4-207ENST00000549249 KNSTRNQ9Y448 316 aa11.06□□□□□ -0.64
DEPDC4-207ENST00000549249 NCOA3Q9Y6Q9 1424 aa11.06□□□□□ -0.64
DEPDC4-207ENST00000549249 POTEMA6NI47 508 aa11.05□□□□□ -0.64
DEPDC4-207ENST00000549249 POTEJP0CG39 1038 aa11.05□□□□□ -0.64
DEPDC4-207ENST00000549249 HSPA1LP34931 641 aa11.05□□□□□ -0.64
DEPDC4-207ENST00000549249 CCDC184Q52MB2 194 aa11.05□□□□□ -0.64
DEPDC4-207ENST00000549249 CC2D1BQ5T0F9 858 aaKnown RBP11.05□□□□□ -0.64
DEPDC4-207ENST00000549249 PLEKHG3A1L390 1219 aa11.04□□□□□ -0.64
DEPDC4-207ENST00000549249 MAP3K13O43283 966 aa11.04□□□□□ -0.64
DEPDC4-207ENST00000549249 TERF2IPQ9NYB0 399 aa11.04□□□□□ -0.64
DEPDC4-207ENST00000549249 DCCP43146 1447 aa11.03□□□□□ -0.64
DEPDC4-207ENST00000549249 EDC4Q6P2E9 1401 aaKnown RBP11.03□□□□□ -0.64
DEPDC4-207ENST00000549249 RALBP1Q15311 655 aa11.03□□□□□ -0.64
DEPDC4-207ENST00000549249 HDGFL2Q7Z4V5 671 aaPredicted RBP11.03□□□□□ -0.64
DEPDC4-207ENST00000549249 SPOCK2Q92563 424 aa11.03□□□□□ -0.64
DEPDC4-207ENST00000549249 BMP2KQ9NSY1 1161 aaPredicted RBP11.03□□□□□ -0.64
DEPDC4-207ENST00000549249 MYBBP1AQ9BQG0 1328 aaKnown RBP11.03□□□□□ -0.64
DEPDC4-207ENST00000549249 POLR3AO14802 1390 aaPredicted RBP11.03□□□□□ -0.64
DEPDC4-207ENST00000549249 USP6P35125 1406 aa11.02□□□□□ -0.64
DEPDC4-207ENST00000549249 DCAF8Q5TAQ9 597 aa11.02□□□□□ -0.65
DEPDC4-207ENST00000549249 POTEGQ6S5H5 508 aa11.02□□□□□ -0.65
DEPDC4-207ENST00000549249 ACEP12821 1306 aa11.02□□□□□ -0.65
DEPDC4-207ENST00000549249 NSD2O96028 1365 aa11.02□□□□□ -0.65
DEPDC4-207ENST00000549249 MST1RQ04912 1400 aa11.01□□□□□ -0.65
DEPDC4-207ENST00000549249 SSH2Q76I76 1423 aa11.01□□□□□ -0.65
DEPDC4-207ENST00000549249 MARF1Q9Y4F3 1742 aaKnown RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 165.7 ms