RNA–Protein interactions for RNA: ENST00000548263.5

CALCOCO1-210, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 1 (best) BASIC

Gene CALCOCO1, Length 3,888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-210ENST00000548263 KDM5CP41229 1560 aa11.72□□□□□ -0.53
CALCOCO1-210ENST00000548263 YEATS2Q9ULM3 1422 aa11.72□□□□□ -0.53
CALCOCO1-210ENST00000548263 MCCP23508 829 aa11.72□□□□□ -0.53
CALCOCO1-210ENST00000548263 AMPHP49418 695 aa11.72□□□□□ -0.53
CALCOCO1-210ENST00000548263 HAP1P54257 671 aaPredicted RBP11.72□□□□□ -0.53
CALCOCO1-210ENST00000548263 NECTIN2Q92692 538 aa11.72□□□□□ -0.53
CALCOCO1-210ENST00000548263 COL17A1Q9UMD9 1497 aaPredicted RBP11.72□□□□□ -0.53
CALCOCO1-210ENST00000548263 XPCQ01831 940 aaPredicted RBP11.71□□□□□ -0.53
CALCOCO1-210ENST00000548263 BLMP54132 1417 aaPredicted RBP11.71□□□□□ -0.54
CALCOCO1-210ENST00000548263 ATP7AQ04656 1500 aa11.71□□□□□ -0.54
CALCOCO1-210ENST00000548263 CHD1LQ86WJ1 897 aa11.7□□□□□ -0.54
CALCOCO1-210ENST00000548263 SCAF11Q99590 1463 aaKnown RBP11.7□□□□□ -0.54
CALCOCO1-210ENST00000548263 TRIM6-TRIM34B2RNG4 842 aa11.7□□□□□ -0.54
CALCOCO1-210ENST00000548263 TRIM27P14373 513 aa11.7□□□□□ -0.54
CALCOCO1-210ENST00000548263 TMPOP42166 694 aaKnown RBP11.7□□□□□ -0.54
CALCOCO1-210ENST00000548263 ZMYM4Q5VZL5 1548 aa11.7□□□□□ -0.54
CALCOCO1-210ENST00000548263 FAM13BQ9NYF5 915 aa11.7□□□□□ -0.54
CALCOCO1-210ENST00000548263 ZRANB1Q9UGI0 708 aa11.7□□□□□ -0.54
CALCOCO1-210ENST00000548263 MYO5CQ9NQX4 1742 aa11.7□□□□□ -0.54
CALCOCO1-210ENST00000548263 CAVIN1Q6NZI2 390 aaKnown RBP11.69□□□□□ -0.54
CALCOCO1-210ENST00000548263 NME9Q86XW9 330 aa11.69□□□□□ -0.54
CALCOCO1-210ENST00000548263 PRKAR2BP31323 418 aa11.69□□□□□ -0.54
CALCOCO1-210ENST00000548263 ZNF428Q96B54 188 aa11.69□□□□□ -0.54
CALCOCO1-210ENST00000548263 ADCY10Q96PN6 1610 aa11.68□□□□□ -0.54
CALCOCO1-210ENST00000548263 CDC45O75419 566 aa11.68□□□□□ -0.54
CALCOCO1-210ENST00000548263 CT47B1P0C2W7 299 aaPredicted RBP11.68□□□□□ -0.54
CALCOCO1-210ENST00000548263 RRAGDQ9NQL2 400 aaPredicted RBP11.68□□□□□ -0.54
CALCOCO1-210ENST00000548263 ASXL1Q8IXJ9 1541 aa11.68□□□□□ -0.54
CALCOCO1-210ENST00000548263 ADGBQ8N7X0 1667 aa11.68□□□□□ -0.54
CALCOCO1-210ENST00000548263 NUCB2P80303 420 aa11.68□□□□□ -0.54
CALCOCO1-210ENST00000548263 TNPO1Q92973 898 aaKnown RBP11.68□□□□□ -0.54
CALCOCO1-210ENST00000548263 K7ELQ4 463 aaPredicted RBP11.67□□□□□ -0.54
CALCOCO1-210ENST00000548263 HMMRO75330 724 aa11.67□□□□□ -0.54
CALCOCO1-210ENST00000548263 KIAA2012Q0VF49 1180 aa11.67□□□□□ -0.54
CALCOCO1-210ENST00000548263 RTF1Q92541 710 aaKnown RBP11.67□□□□□ -0.54
CALCOCO1-210ENST00000548263 API5Q9BZZ5 524 aaKnown RBP11.67□□□□□ -0.54
CALCOCO1-210ENST00000548263 EMILIN1Q9Y6C2 1016 aa11.67□□□□□ -0.54
CALCOCO1-210ENST00000548263 PREX2Q70Z35 1606 aa11.67□□□□□ -0.54
CALCOCO1-210ENST00000548263 LMOD3Q0VAK6 560 aa11.67□□□□□ -0.54
CALCOCO1-210ENST00000548263 CDC42BPBQ9Y5S2 1711 aa11.67□□□□□ -0.54
CALCOCO1-210ENST00000548263 GNAI1P63096 354 aa11.66□□□□□ -0.54
CALCOCO1-210ENST00000548263 R3HCC1Q9Y3T6 440 aaKnown RBP11.66□□□□□ -0.54
CALCOCO1-210ENST00000548263 OS9Q13438 667 aaPredicted RBP11.66□□□□□ -0.54
CALCOCO1-210ENST00000548263 RILPL2Q969X0 211 aa11.66□□□□□ -0.54
CALCOCO1-210ENST00000548263 SYAP1Q96A49 352 aaPredicted RBP11.66□□□□□ -0.54
CALCOCO1-210ENST00000548263 NLRP6P59044 892 aa11.66□□□□□ -0.54
CALCOCO1-210ENST00000548263 DCTN1Q14203 1278 aa11.66□□□□□ -0.54
CALCOCO1-210ENST00000548263 RNF214Q8ND24 703 aa11.66□□□□□ -0.54
CALCOCO1-210ENST00000548263 UBE2Q2Q8WVN8 375 aa11.66□□□□□ -0.54
CALCOCO1-210ENST00000548263 GCC1Q96CN9 775 aa11.66□□□□□ -0.54
CALCOCO1-210ENST00000548263 ISY1Q9ULR0 285 aaKnown RBP11.66□□□□□ -0.54
CALCOCO1-210ENST00000548263 CIZ1Q9ULV3 898 aaPredicted RBP11.66□□□□□ -0.54
CALCOCO1-210ENST00000548263 PRPF40AO75400 957 aaKnown RBP11.65□□□□□ -0.54
CALCOCO1-210ENST00000548263 NUDT16Q96DE0 195 aaKnown RBP11.65□□□□□ -0.54
CALCOCO1-210ENST00000548263 PIK3C2GO75747 1445 aa11.65□□□□□ -0.54
CALCOCO1-210ENST00000548263 NPATQ14207 1427 aa11.65□□□□□ -0.54
CALCOCO1-210ENST00000548263 GPRASP1Q5JY77 1395 aa11.65□□□□□ -0.54
CALCOCO1-210ENST00000548263 REC8O95072 547 aa11.65□□□□□ -0.54
CALCOCO1-210ENST00000548263 KCNJ4P48050 445 aa11.65□□□□□ -0.54
CALCOCO1-210ENST00000548263 INTS3Q68E01 1043 aaKnown RBP11.65□□□□□ -0.54
CALCOCO1-210ENST00000548263 ATP10AO60312 1499 aa11.65□□□□□ -0.54
CALCOCO1-210ENST00000548263 RPGRIP1LQ68CZ1 1315 aa11.65□□□□□ -0.54
CALCOCO1-210ENST00000548263 ARHGEF5Q12774 1597 aa11.65□□□□□ -0.54
CALCOCO1-210ENST00000548263 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.64□□□□□ -0.55
CALCOCO1-210ENST00000548263 RTEL1-TNFRSF6BF6WH68 1400 aa11.64□□□□□ -0.55
CALCOCO1-210ENST00000548263 INSRP06213 1382 aa11.64□□□□□ -0.55
CALCOCO1-210ENST00000548263 RBM10P98175 930 aaKnown RBP11.64□□□□□ -0.55
CALCOCO1-210ENST00000548263 MAST1Q9Y2H9 1570 aa11.64□□□□□ -0.55
CALCOCO1-210ENST00000548263 ABCC1P33527 1531 aa11.64□□□□□ -0.55
CALCOCO1-210ENST00000548263 ZNF521Q96K83 1311 aa11.64□□□□□ -0.55
CALCOCO1-210ENST00000548263 SSFA2P28290 1259 aa11.63□□□□□ -0.55
CALCOCO1-210ENST00000548263 CCDC173Q0VFZ6 552 aa11.63□□□□□ -0.55
CALCOCO1-210ENST00000548263 TWISTNBQ3B726 338 aaPredicted RBP11.63□□□□□ -0.55
CALCOCO1-210ENST00000548263 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.63□□□□□ -0.55
CALCOCO1-210ENST00000548263 KIAA1211Q6ZU35 1233 aa11.63□□□□□ -0.55
CALCOCO1-210ENST00000548263 STK31Q9BXU1 1019 aa11.63□□□□□ -0.55
CALCOCO1-210ENST00000548263 TSPOAP1O95153 1857 aa11.63□□□□□ -0.55
CALCOCO1-210ENST00000548263 RABEP1Q15276 862 aa11.62□□□□□ -0.55
CALCOCO1-210ENST00000548263 GOLGA6L4A6NEF3 574 aa11.62□□□□□ -0.55
CALCOCO1-210ENST00000548263 CLCN1P35523 988 aa11.62□□□□□ -0.55
CALCOCO1-210ENST00000548263 SULT6B1Q6IMI4 303 aa11.62□□□□□ -0.55
CALCOCO1-210ENST00000548263 MAGI2Q86UL8 1455 aa11.62□□□□□ -0.55
CALCOCO1-210ENST00000548263 TRMT2AQ8IZ69 625 aaKnown RBP11.62□□□□□ -0.55
CALCOCO1-210ENST00000548263 POGZQ7Z3K3 1410 aa11.62□□□□□ -0.55
CALCOCO1-210ENST00000548263 CHAF1AQ13111 956 aaPredicted RBP11.61□□□□□ -0.55
CALCOCO1-210ENST00000548263 ESCO1Q5FWF5 840 aa11.61□□□□□ -0.55
CALCOCO1-210ENST00000548263 DNAJC5Q9H3Z4 198 aa11.61□□□□□ -0.55
CALCOCO1-210ENST00000548263 ANO2Q9NQ90 1003 aa11.61□□□□□ -0.55
CALCOCO1-210ENST00000548263 MIS18AQ9NYP9 233 aa11.61□□□□□ -0.55
CALCOCO1-210ENST00000548263 UHRF1BP1LA0JNW5 1464 aa11.61□□□□□ -0.55
CALCOCO1-210ENST00000548263 CSB-PGBD3P0DP91 1061 aa11.61□□□□□ -0.55
CALCOCO1-210ENST00000548263 PSME1Q06323 249 aa11.61□□□□□ -0.55
CALCOCO1-210ENST00000548263 ABTB2Q8N961 1025 aa11.61□□□□□ -0.55
CALCOCO1-210ENST00000548263 POLR3AO14802 1390 aaPredicted RBP11.61□□□□□ -0.55
CALCOCO1-210ENST00000548263 FYB1O15117 783 aa11.61□□□□□ -0.55
CALCOCO1-210ENST00000548263 RRP9O43818 475 aaKnown RBP11.61□□□□□ -0.55
CALCOCO1-210ENST00000548263 NEK4P51957 841 aa11.61□□□□□ -0.55
CALCOCO1-210ENST00000548263 HDAC1Q13547 482 aaPredicted RBP11.61□□□□□ -0.55
CALCOCO1-210ENST00000548263 RBM42Q9BTD8 480 aaKnown RBP11.61□□□□□ -0.55
CALCOCO1-210ENST00000548263 CCDC61Q9Y6R9 512 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms