RNA–Protein interactions for RNA: ENST00000547566.5

HNRNPA1-205, Transcript of heterogeneous nuclear ribonucleoprotein A1, humanhuman

TSL 1 (best)

Gene HNRNPA1, Length 1,234 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPA1-205ENST00000547566 SRCAPQ6ZRS2 3230 aa23.49■■□□□ 1.35
HNRNPA1-205ENST00000547566 BLMP54132 1417 aaPredicted RBP23.49■■□□□ 1.35
HNRNPA1-205ENST00000547566 TOPAZ1Q8N9V7 1692 aa23.48■■□□□ 1.35
HNRNPA1-205ENST00000547566 ZRANB1Q9UGI0 708 aa23.48■■□□□ 1.35
HNRNPA1-205ENST00000547566 NUDT16Q96DE0 195 aaKnown RBP23.47■■□□□ 1.35
HNRNPA1-205ENST00000547566 BTG4Q9NY30 223 aa23.46■■□□□ 1.35
HNRNPA1-205ENST00000547566 PAK3O75914 559 aaPredicted RBP23.45■■□□□ 1.34
HNRNPA1-205ENST00000547566 PHRF1Q9P1Y6 1649 aaKnown RBP23.44■■□□□ 1.34
HNRNPA1-205ENST00000547566 CDK19Q9BWU1 502 aa23.44■■□□□ 1.34
HNRNPA1-205ENST00000547566 KRT27Q7Z3Y8 459 aa23.43■■□□□ 1.34
HNRNPA1-205ENST00000547566 FAM98CQ17RN3 349 aaKnown RBP23.4■■□□□ 1.34
HNRNPA1-205ENST00000547566 NBPF1Q3BBV0 1214 aa23.4■■□□□ 1.34
HNRNPA1-205ENST00000547566 POLR3AO14802 1390 aaPredicted RBP23.4■■□□□ 1.34
HNRNPA1-205ENST00000547566 DEFB132Q7Z7B7 95 aa23.39■■□□□ 1.33
HNRNPA1-205ENST00000547566 A0A0G2JS52 829 aa23.38■■□□□ 1.33
HNRNPA1-205ENST00000547566 MYT1Q01538 1121 aa23.38■■□□□ 1.33
HNRNPA1-205ENST00000547566 SF3B2Q13435 895 aaKnown RBP23.38■■□□□ 1.33
HNRNPA1-205ENST00000547566 PRDM11Q9NQV5 511 aa23.38■■□□□ 1.33
HNRNPA1-205ENST00000547566 THSD7AQ9UPZ6 1657 aa23.38■■□□□ 1.33
HNRNPA1-205ENST00000547566 ACEP12821 1306 aa23.37■■□□□ 1.33
HNRNPA1-205ENST00000547566 SPATA31A5Q5VU36 1347 aa23.37■■□□□ 1.33
HNRNPA1-205ENST00000547566 SPATA31A7Q8IWB4 1347 aa23.37■■□□□ 1.33
HNRNPA1-205ENST00000547566 CCDC61Q9Y6R9 512 aa23.37■■□□□ 1.33
HNRNPA1-205ENST00000547566 KIAA0232Q92628 1395 aa23.36■■□□□ 1.33
HNRNPA1-205ENST00000547566 QRICH2Q9H0J4 1663 aa23.35■■□□□ 1.33
HNRNPA1-205ENST00000547566 PLEKHG3A1L390 1219 aa23.35■■□□□ 1.33
HNRNPA1-205ENST00000547566 NBPF8Q3BBV2 869 aa23.35■■□□□ 1.33
HNRNPA1-205ENST00000547566 RGPD1P0DJD0 1748 aa23.35■■□□□ 1.33
HNRNPA1-205ENST00000547566 NUTM2GQ5VZR2 741 aa23.33■■□□□ 1.33
HNRNPA1-205ENST00000547566 CHRNA2Q15822 529 aa23.32■■□□□ 1.32
HNRNPA1-205ENST00000547566 NRKQ7Z2Y5 1582 aa23.31■■□□□ 1.32
HNRNPA1-205ENST00000547566 CENPJQ9HC77 1338 aaPredicted RBP23.31■■□□□ 1.32
HNRNPA1-205ENST00000547566 ZC3H6P61129 1189 aaKnown RBP23.3■■□□□ 1.32
HNRNPA1-205ENST00000547566 SPATA31A1Q5TZJ5 1347 aa23.3■■□□□ 1.32
HNRNPA1-205ENST00000547566 PPIP5K1Q6PFW1 1433 aa23.29■■□□□ 1.32
HNRNPA1-205ENST00000547566 TNS1Q9HBL0 1735 aaKnown RBP23.28■■□□□ 1.32
HNRNPA1-205ENST00000547566 SRPK2P78362 688 aaKnown RBP23.28■■□□□ 1.32
HNRNPA1-205ENST00000547566 ABTB2Q8N961 1025 aa23.28■■□□□ 1.32
HNRNPA1-205ENST00000547566 TRPM1Q7Z4N2 1603 aa23.28■■□□□ 1.32
HNRNPA1-205ENST00000547566 BAG6P46379 1132 aa23.27■■□□□ 1.32
HNRNPA1-205ENST00000547566 FAM182BQ5T319 152 aa23.27■■□□□ 1.32
HNRNPA1-205ENST00000547566 STRN4Q9NRL3 753 aa23.27■■□□□ 1.32
HNRNPA1-205ENST00000547566 LMO7Q8WWI1 1683 aa23.27■■□□□ 1.32
HNRNPA1-205ENST00000547566 L3MBTL2Q969R5 705 aa23.26■■□□□ 1.31
HNRNPA1-205ENST00000547566 CABP2Q9NPB3 220 aa23.26■■□□□ 1.31
HNRNPA1-205ENST00000547566 USP19O94966 1318 aa23.26■■□□□ 1.31
HNRNPA1-205ENST00000547566 CAMTA1Q9Y6Y1 1673 aa23.25■■□□□ 1.31
HNRNPA1-205ENST00000547566 CPDO75976 1380 aa23.24■■□□□ 1.31
HNRNPA1-205ENST00000547566 SSH2Q76I76 1423 aa23.23■■□□□ 1.31
HNRNPA1-205ENST00000547566 NLRP13Q86W25 1043 aa23.22■■□□□ 1.31
HNRNPA1-205ENST00000547566 BRD4O60885 1362 aaPredicted RBP23.22■■□□□ 1.31
HNRNPA1-205ENST00000547566 EVA1CP58658 441 aa23.21■■□□□ 1.31
HNRNPA1-205ENST00000547566 EN1Q05925 392 aaPredicted RBP23.21■■□□□ 1.31
HNRNPA1-205ENST00000547566 SIN3AQ96ST3 1273 aa23.21■■□□□ 1.31
HNRNPA1-205ENST00000547566 LRP5O75197 1615 aa23.21■■□□□ 1.31
HNRNPA1-205ENST00000547566 DISP2A7MBM2 1401 aa23.2■■□□□ 1.3
HNRNPA1-205ENST00000547566 CABP1Q9NZU7 370 aa23.2■■□□□ 1.3
HNRNPA1-205ENST00000547566 GCP02774 474 aa23.19■■□□□ 1.3
HNRNPA1-205ENST00000547566 USP35Q9P2H5 1018 aa23.19■■□□□ 1.3
HNRNPA1-205ENST00000547566 USP6P35125 1406 aa23.18■■□□□ 1.3
HNRNPA1-205ENST00000547566 LARP1Q6PKG0 1096 aaKnown RBP23.18■■□□□ 1.3
HNRNPA1-205ENST00000547566 BARGINQ6ZT62 677 aa23.18■■□□□ 1.3
HNRNPA1-205ENST00000547566 AKAP12Q02952 1782 aa23.18■■□□□ 1.3
HNRNPA1-205ENST00000547566 PIK3C2AO00443 1686 aa23.17■■□□□ 1.3
HNRNPA1-205ENST00000547566 PARP4Q9UKK3 1724 aaKnown RBP23.16■■□□□ 1.3
HNRNPA1-205ENST00000547566 PSDA5PKW4 1024 aaPredicted RBP23.16■■□□□ 1.3
HNRNPA1-205ENST00000547566 FAM196AQ6ZSG2 479 aa23.16■■□□□ 1.3
HNRNPA1-205ENST00000547566 EVC2Q86UK5 1308 aa23.15■■□□□ 1.3
HNRNPA1-205ENST00000547566 SLIT3O75094 1523 aa23.15■■□□□ 1.3
HNRNPA1-205ENST00000547566 COL18A1P39060 1754 aa23.14■■□□□ 1.3
HNRNPA1-205ENST00000547566 COL5A2P05997 1499 aaPredicted RBP23.14■■□□□ 1.29
HNRNPA1-205ENST00000547566 NEUROD1Q13562 356 aa23.14■■□□□ 1.29
HNRNPA1-205ENST00000547566 TCP11L2Q8N4U5 519 aa23.14■■□□□ 1.29
HNRNPA1-205ENST00000547566 TRIM37O94972 964 aa23.13■■□□□ 1.29
HNRNPA1-205ENST00000547566 NLRP6P59044 892 aa23.13■■□□□ 1.29
HNRNPA1-205ENST00000547566 ROCK2O75116 1388 aaKnown RBP23.13■■□□□ 1.29
HNRNPA1-205ENST00000547566 RGPD5Q99666 1765 aa23.12■■□□□ 1.29
HNRNPA1-205ENST00000547566 PDE3BQ13370 1112 aa23.12■■□□□ 1.29
HNRNPA1-205ENST00000547566 EZH2Q15910 746 aaKnown RBP23.12■■□□□ 1.29
HNRNPA1-205ENST00000547566 THRAP3Q9Y2W1 955 aaKnown RBP23.11■■□□□ 1.29
HNRNPA1-205ENST00000547566 RREB1Q92766 1687 aa23.11■■□□□ 1.29
HNRNPA1-205ENST00000547566 CAMKK2Q96RR4 588 aa23.1■■□□□ 1.29
HNRNPA1-205ENST00000547566 SBF2Q86WG5 1849 aa23.1■■□□□ 1.29
HNRNPA1-205ENST00000547566 WNK3Q9BYP7 1800 aa23.1■■□□□ 1.29
HNRNPA1-205ENST00000547566 AATKQ6ZMQ8 1374 aa23.09■■□□□ 1.29
HNRNPA1-205ENST00000547566 CRB1P82279 1406 aa23.08■■□□□ 1.29
HNRNPA1-205ENST00000547566 ZBTB7CA1YPR0 619 aa23.08■■□□□ 1.29
HNRNPA1-205ENST00000547566 APBA3O96018 575 aa23.07■■□□□ 1.28
HNRNPA1-205ENST00000547566 R3HDM1Q15032 1099 aaKnown RBP23.07■■□□□ 1.28
HNRNPA1-205ENST00000547566 ZNF692Q9BU19 519 aaPredicted RBP23.07■■□□□ 1.28
HNRNPA1-205ENST00000547566 NUP188Q5SRE5 1749 aa23.07■■□□□ 1.28
HNRNPA1-205ENST00000547566 MON2Q7Z3U7 1717 aa23.06■■□□□ 1.28
HNRNPA1-205ENST00000547566 TTC21BQ7Z4L5 1316 aa23.06■■□□□ 1.28
HNRNPA1-205ENST00000547566 PEAK1Q9H792 1746 aa23.05■■□□□ 1.28
HNRNPA1-205ENST00000547566 LRRC37A3O60309 1634 aa23.05■■□□□ 1.28
HNRNPA1-205ENST00000547566 PARD3Q8TEW0 1356 aa23.05■■□□□ 1.28
HNRNPA1-205ENST00000547566 CPSF1Q10570 1443 aaKnown RBP23.03■■□□□ 1.28
HNRNPA1-205ENST00000547566 AXIN2Q9Y2T1 843 aa23.02■■□□□ 1.28
HNRNPA1-205ENST00000547566 TTC21AQ8NDW8 1320 aa23.01■■□□□ 1.27
HNRNPA1-205ENST00000547566 TOM1L2Q6ZVM7 507 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms