RNA–Protein interactions for RNA: ENST00000547019.1

R3HDM2-210, Transcript of R3H domain containing 2, humanhuman

TSL 3

Gene R3HDM2, Length 595 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2-210ENST00000547019 PARD3Q8TEW0 1356 aa14.86□□□□□ -0.03
R3HDM2-210ENST00000547019 CHD4Q14839 1912 aa14.86□□□□□ -0.03
R3HDM2-210ENST00000547019 ZNF784Q8NCA9 323 aaPredicted RBP14.86□□□□□ -0.03
R3HDM2-210ENST00000547019 APBA3O96018 575 aa14.85□□□□□ -0.03
R3HDM2-210ENST00000547019 PSME1Q06323 249 aa14.85□□□□□ -0.03
R3HDM2-210ENST00000547019 RGPD3A6NKT7 1758 aaPredicted RBP14.85□□□□□ -0.03
R3HDM2-210ENST00000547019 RGPD4Q7Z3J3 1758 aa14.85□□□□□ -0.03
R3HDM2-210ENST00000547019 SPATA31E1Q6ZUB1 1445 aa14.84□□□□□ -0.03
R3HDM2-210ENST00000547019 SBF2Q86WG5 1849 aa14.84□□□□□ -0.03
R3HDM2-210ENST00000547019 IFFO2Q5TF58 517 aa14.83□□□□□ -0.04
R3HDM2-210ENST00000547019 PMFBP1Q8TBY8 1022 aa14.83□□□□□ -0.04
R3HDM2-210ENST00000547019 SPATA31A1Q5TZJ5 1347 aa14.83□□□□□ -0.04
R3HDM2-210ENST00000547019 PEAK1Q9H792 1746 aa14.83□□□□□ -0.04
R3HDM2-210ENST00000547019 SENP3-EIF4A1A0A087X0R7 540 aa14.82□□□□□ -0.04
R3HDM2-210ENST00000547019 SPON1Q9HCB6 807 aa14.82□□□□□ -0.04
R3HDM2-210ENST00000547019 KCNQ2O43526 872 aa14.81□□□□□ -0.04
R3HDM2-210ENST00000547019 FAM196AQ6ZSG2 479 aa14.81□□□□□ -0.04
R3HDM2-210ENST00000547019 PPP1R1BQ9UD71 204 aaPredicted RBP14.81□□□□□ -0.04
R3HDM2-210ENST00000547019 CEP350Q5VT06 3117 aa14.81□□□□□ -0.04
R3HDM2-210ENST00000547019 PARP4Q9UKK3 1724 aaKnown RBP14.8□□□□□ -0.04
R3HDM2-210ENST00000547019 ANKARQ7Z5J8 1434 aa14.8□□□□□ -0.04
R3HDM2-210ENST00000547019 LMO7Q8WWI1 1683 aa14.79□□□□□ -0.04
R3HDM2-210ENST00000547019 PDGFDQ9GZP0 370 aaPredicted RBP14.79□□□□□ -0.04
R3HDM2-210ENST00000547019 ANO8Q9HCE9 1232 aaPredicted RBP14.79□□□□□ -0.04
R3HDM2-210ENST00000547019 SAFB2Q14151 953 aaKnown RBP eCLIP14.78□□□□□ -0.04
R3HDM2-210ENST00000547019 KIAA0232Q92628 1395 aa14.77□□□□□ -0.04
R3HDM2-210ENST00000547019 PRR36Q9H6K5 1346 aa14.77□□□□□ -0.04
R3HDM2-210ENST00000547019 CHRNA2Q15822 529 aa14.77□□□□□ -0.05
R3HDM2-210ENST00000547019 ANKRD30BQ9BXX2 1392 aa14.76□□□□□ -0.05
R3HDM2-210ENST00000547019 ACIN1Q9UKV3 1341 aaKnown RBP14.76□□□□□ -0.05
R3HDM2-210ENST00000547019 RGL3Q3MIN7 710 aa14.76□□□□□ -0.05
R3HDM2-210ENST00000547019 PRDM11Q9NQV5 511 aa14.76□□□□□ -0.05
R3HDM2-210ENST00000547019 LRRC37A3O60309 1634 aa14.76□□□□□ -0.05
R3HDM2-210ENST00000547019 DLC1Q96QB1 1528 aa14.76□□□□□ -0.05
R3HDM2-210ENST00000547019 TULP4Q9NRJ4 1543 aa14.76□□□□□ -0.05
R3HDM2-210ENST00000547019 SSH2Q76I76 1423 aa14.75□□□□□ -0.05
R3HDM2-210ENST00000547019 C1QTNF8P60827 252 aa14.75□□□□□ -0.05
R3HDM2-210ENST00000547019 NBPF8Q3BBV2 869 aa14.75□□□□□ -0.05
R3HDM2-210ENST00000547019 NBPF14Q5TI25 921 aa14.75□□□□□ -0.05
R3HDM2-210ENST00000547019 STRN4Q9NRL3 753 aa14.75□□□□□ -0.05
R3HDM2-210ENST00000547019 WNK3Q9BYP7 1800 aa14.74□□□□□ -0.05
R3HDM2-210ENST00000547019 SIRT1Q96EB6 747 aa14.74□□□□□ -0.05
R3HDM2-210ENST00000547019 PRAM1Q96QH2 718 aa14.74□□□□□ -0.05
R3HDM2-210ENST00000547019 USP35Q9P2H5 1018 aa14.74□□□□□ -0.05
R3HDM2-210ENST00000547019 ITSN1Q15811 1721 aa14.73□□□□□ -0.05
R3HDM2-210ENST00000547019 PTGER2P43116 358 aa14.73□□□□□ -0.05
R3HDM2-210ENST00000547019 ADGRB1O14514 1584 aa14.73□□□□□ -0.05
R3HDM2-210ENST00000547019 SLC4A1APQ9BWU0 796 aaKnown RBP14.72□□□□□ -0.05
R3HDM2-210ENST00000547019 GPRASP1Q5JY77 1395 aa14.72□□□□□ -0.05
R3HDM2-210ENST00000547019 DCAF8L1A6NGE4 600 aa14.71□□□□□ -0.05
R3HDM2-210ENST00000547019 BARGINQ6ZT62 677 aa14.71□□□□□ -0.05
R3HDM2-210ENST00000547019 PTF1AQ7RTS3 328 aa14.71□□□□□ -0.05
R3HDM2-210ENST00000547019 CFAP70Q5T0N1 1121 aa14.7□□□□□ -0.06
R3HDM2-210ENST00000547019 HIRIP3Q9BW71 556 aaPredicted RBP14.7□□□□□ -0.06
R3HDM2-210ENST00000547019 C14orf93Q9H972 538 aaKnown RBP14.7□□□□□ -0.06
R3HDM2-210ENST00000547019 TOPAZ1Q8N9V7 1692 aa14.7□□□□□ -0.06
R3HDM2-210ENST00000547019 SHANK3Q9BYB0 1731 aa14.69□□□□□ -0.06
R3HDM2-210ENST00000547019 ZBTB7AO95365 584 aa14.69□□□□□ -0.06
R3HDM2-210ENST00000547019 GOLGB1Q14789 3259 aaKnown RBP14.69□□□□□ -0.06
R3HDM2-210ENST00000547019 ATP7BP35670 1465 aa14.69□□□□□ -0.06
R3HDM2-210ENST00000547019 AKAP12Q02952 1782 aa14.68□□□□□ -0.06
R3HDM2-210ENST00000547019 ZC3H6P61129 1189 aaKnown RBP14.68□□□□□ -0.06
R3HDM2-210ENST00000547019 PDE3BQ13370 1112 aa14.68□□□□□ -0.06
R3HDM2-210ENST00000547019 LARP1Q6PKG0 1096 aaKnown RBP14.68□□□□□ -0.06
R3HDM2-210ENST00000547019 DHX57Q6P158 1386 aaKnown RBP14.68□□□□□ -0.06
R3HDM2-210ENST00000547019 FHDC1Q9C0D6 1143 aaPredicted RBP14.67□□□□□ -0.06
R3HDM2-210ENST00000547019 ARHGEF28Q8N1W1 1705 aaKnown RBP14.66□□□□□ -0.06
R3HDM2-210ENST00000547019 PAK3O75914 559 aaPredicted RBP14.66□□□□□ -0.06
R3HDM2-210ENST00000547019 PROM2Q8N271 834 aa14.66□□□□□ -0.06
R3HDM2-210ENST00000547019 OVOS2A0A0G2JMS6 1433 aa14.66□□□□□ -0.06
R3HDM2-210ENST00000547019 OVOS2A0A0J9YW53 1432 aa14.66□□□□□ -0.06
R3HDM2-210ENST00000547019 OVOS2Q6IE36 1432 aa14.66□□□□□ -0.06
R3HDM2-210ENST00000547019 MINK1Q8N4C8 1332 aaPredicted RBP14.66□□□□□ -0.06
R3HDM2-210ENST00000547019 COL5A2P05997 1499 aaPredicted RBP14.65□□□□□ -0.06
R3HDM2-210ENST00000547019 NUTM2GQ5VZR2 741 aa14.65□□□□□ -0.06
R3HDM2-210ENST00000547019 SYT17Q9BSW7 474 aa14.65□□□□□ -0.06
R3HDM2-210ENST00000547019 ATF5Q9Y2D1 282 aaPredicted RBP14.65□□□□□ -0.06
R3HDM2-210ENST00000547019 TCP11L2Q8N4U5 519 aa14.64□□□□□ -0.07
R3HDM2-210ENST00000547019 SGIP1Q9BQI5 828 aa14.64□□□□□ -0.07
R3HDM2-210ENST00000547019 PAPPAQ13219 1627 aa14.63□□□□□ -0.07
R3HDM2-210ENST00000547019 PLSCR1O15162 318 aa14.63□□□□□ -0.07
R3HDM2-210ENST00000547019 POGKQ9P215 609 aa14.62□□□□□ -0.07
R3HDM2-210ENST00000547019 NGDNQ8NEJ9 315 aaKnown RBP14.61□□□□□ -0.07
R3HDM2-210ENST00000547019 CPDO75976 1380 aa14.6□□□□□ -0.07
R3HDM2-210ENST00000547019 COL18A1P39060 1754 aa14.6□□□□□ -0.07
R3HDM2-210ENST00000547019 WASLO00401 505 aaPredicted RBP14.6□□□□□ -0.07
R3HDM2-210ENST00000547019 RGPD5Q99666 1765 aa14.6□□□□□ -0.07
R3HDM2-210ENST00000547019 EIF3AQ14152 1382 aaKnown RBP14.6□□□□□ -0.07
R3HDM2-210ENST00000547019 COL24A1Q17RW2 1714 aa14.59□□□□□ -0.07
R3HDM2-210ENST00000547019 EVA1CP58658 441 aa14.59□□□□□ -0.07
R3HDM2-210ENST00000547019 TRAK1Q9UPV9 953 aa14.59□□□□□ -0.07
R3HDM2-210ENST00000547019 USP19O94966 1318 aa14.59□□□□□ -0.07
R3HDM2-210ENST00000547019 CRB1P82279 1406 aa14.58□□□□□ -0.07
R3HDM2-210ENST00000547019 TUBGCP6Q96RT7 1819 aa14.58□□□□□ -0.08
R3HDM2-210ENST00000547019 BCL11BQ9C0K0 894 aaPredicted RBP14.58□□□□□ -0.08
R3HDM2-210ENST00000547019 THRAP3Q9Y2W1 955 aaKnown RBP14.58□□□□□ -0.08
R3HDM2-210ENST00000547019 GIGYF1O75420 1035 aaPredicted RBP14.57□□□□□ -0.08
R3HDM2-210ENST00000547019 POLR3AO14802 1390 aaPredicted RBP14.57□□□□□ -0.08
R3HDM2-210ENST00000547019 NHSQ6T4R5 1651 aa14.56□□□□□ -0.08
R3HDM2-210ENST00000547019 MAP3K5Q99683 1374 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms