RNA–Protein interactions for RNA: ENST00000546500.5

HNRNPA1-203, Transcript of heterogeneous nuclear ribonucleoprotein A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HNRNPA1, Length 4,121 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPA1-203ENST00000546500 PLPPR3Q6T4P5 718 aa13.64□□□□□ -0.23
HNRNPA1-203ENST00000546500 CRBNQ96SW2 442 aa13.64□□□□□ -0.23
HNRNPA1-203ENST00000546500 CPSF1Q10570 1443 aaKnown RBP13.64□□□□□ -0.23
HNRNPA1-203ENST00000546500 ARHGAP23Q9P227 1491 aa13.64□□□□□ -0.23
HNRNPA1-203ENST00000546500 LTKP29376 864 aa13.63□□□□□ -0.23
HNRNPA1-203ENST00000546500 CDC42BPGQ6DT37 1551 aa13.63□□□□□ -0.23
HNRNPA1-203ENST00000546500 COG3Q96JB2 828 aa13.63□□□□□ -0.23
HNRNPA1-203ENST00000546500 DIP2AQ14689 1571 aa13.62□□□□□ -0.23
HNRNPA1-203ENST00000546500 RRP7AQ9Y3A4 280 aaKnown RBP13.62□□□□□ -0.23
HNRNPA1-203ENST00000546500 CANXP27824 592 aaKnown RBP13.62□□□□□ -0.23
HNRNPA1-203ENST00000546500 ROBO2Q9HCK4 1378 aa13.62□□□□□ -0.23
HNRNPA1-203ENST00000546500 ADGRB2O60241 1585 aa13.61□□□□□ -0.23
HNRNPA1-203ENST00000546500 PHF23Q9BUL5 403 aaPredicted RBP13.61□□□□□ -0.23
HNRNPA1-203ENST00000546500 PNPLA6Q8IY17 1366 aa13.61□□□□□ -0.23
HNRNPA1-203ENST00000546500 COL3A1P02461 1466 aaPredicted RBP13.61□□□□□ -0.23
HNRNPA1-203ENST00000546500 SLC26A8Q96RN1 970 aa13.6□□□□□ -0.23
HNRNPA1-203ENST00000546500 AATKQ6ZMQ8 1374 aa13.59□□□□□ -0.23
HNRNPA1-203ENST00000546500 FCHSD2O94868 740 aa13.59□□□□□ -0.23
HNRNPA1-203ENST00000546500 SPINK5Q9NQ38 1064 aaPredicted RBP13.59□□□□□ -0.23
HNRNPA1-203ENST00000546500 PPM1GO15355 546 aaPredicted RBP13.59□□□□□ -0.23
HNRNPA1-203ENST00000546500 CT47B1P0C2W7 299 aaPredicted RBP13.59□□□□□ -0.23
HNRNPA1-203ENST00000546500 AMOTL2Q9Y2J4 779 aa13.59□□□□□ -0.23
HNRNPA1-203ENST00000546500 TCERG1O14776 1098 aaKnown RBP13.58□□□□□ -0.23
HNRNPA1-203ENST00000546500 PTCH1Q13635 1447 aa13.58□□□□□ -0.23
HNRNPA1-203ENST00000546500 ITSN1Q15811 1721 aa13.58□□□□□ -0.24
HNRNPA1-203ENST00000546500 PDE3AQ14432 1141 aa13.58□□□□□ -0.24
HNRNPA1-203ENST00000546500 POLKQ9UBT6 870 aa13.58□□□□□ -0.24
HNRNPA1-203ENST00000546500 TMPOP42166 694 aaKnown RBP13.58□□□□□ -0.24
HNRNPA1-203ENST00000546500 IL16Q14005 1332 aa13.57□□□□□ -0.24
HNRNPA1-203ENST00000546500 PIK3R4Q99570 1358 aa13.57□□□□□ -0.24
HNRNPA1-203ENST00000546500 PLEKHG3A1L390 1219 aa13.57□□□□□ -0.24
HNRNPA1-203ENST00000546500 NME9Q86XW9 330 aa13.57□□□□□ -0.24
HNRNPA1-203ENST00000546500 MON2Q7Z3U7 1717 aa13.57□□□□□ -0.24
HNRNPA1-203ENST00000546500 CDK12Q9NYV4 1490 aaPredicted RBP13.56□□□□□ -0.24
HNRNPA1-203ENST00000546500 CALD1Q05682 793 aaKnown RBP13.56□□□□□ -0.24
HNRNPA1-203ENST00000546500 PLEKHF1Q96S99 279 aa13.56□□□□□ -0.24
HNRNPA1-203ENST00000546500 DMRT2Q9Y5R5 561 aa13.56□□□□□ -0.24
HNRNPA1-203ENST00000546500 FANCIQ9NVI1 1328 aa13.56□□□□□ -0.24
HNRNPA1-203ENST00000546500 PRR36Q9H6K5 1346 aa13.55□□□□□ -0.24
HNRNPA1-203ENST00000546500 MS4A1P11836 297 aa13.55□□□□□ -0.24
HNRNPA1-203ENST00000546500 AAMPQ13685 434 aa13.55□□□□□ -0.24
HNRNPA1-203ENST00000546500 CENPQQ7L2Z9 268 aaPredicted RBP13.55□□□□□ -0.24
HNRNPA1-203ENST00000546500 C20orf194Q5TEA3 1177 aa13.55□□□□□ -0.24
HNRNPA1-203ENST00000546500 AKAP12Q02952 1782 aa13.55□□□□□ -0.24
HNRNPA1-203ENST00000546500 PTPRUQ92729 1446 aa13.54□□□□□ -0.24
HNRNPA1-203ENST00000546500 CEP170BQ9Y4F5 1589 aaPredicted RBP13.54□□□□□ -0.24
HNRNPA1-203ENST00000546500 RIPK4P57078 832 aa13.54□□□□□ -0.24
HNRNPA1-203ENST00000546500 ACEP12821 1306 aa13.54□□□□□ -0.24
HNRNPA1-203ENST00000546500 TTC21BQ7Z4L5 1316 aa13.54□□□□□ -0.24
HNRNPA1-203ENST00000546500 BCAR3O75815 825 aa13.54□□□□□ -0.24
HNRNPA1-203ENST00000546500 ANKLE2Q86XL3 938 aa13.53□□□□□ -0.24
HNRNPA1-203ENST00000546500 TTC21AQ8NDW8 1320 aa13.53□□□□□ -0.24
HNRNPA1-203ENST00000546500 LMOD3Q0VAK6 560 aa13.53□□□□□ -0.24
HNRNPA1-203ENST00000546500 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.53□□□□□ -0.24
HNRNPA1-203ENST00000546500 RARSP54136 660 aaKnown RBP13.53□□□□□ -0.24
HNRNPA1-203ENST00000546500 PRKAR2BP31323 418 aa13.52□□□□□ -0.24
HNRNPA1-203ENST00000546500 EMILIN1Q9Y6C2 1016 aa13.52□□□□□ -0.25
HNRNPA1-203ENST00000546500 NCKAP5LQ9HCH0 1330 aa13.52□□□□□ -0.25
HNRNPA1-203ENST00000546500 USP6P35125 1406 aa13.51□□□□□ -0.25
HNRNPA1-203ENST00000546500 NGDNQ8NEJ9 315 aaKnown RBP13.51□□□□□ -0.25
HNRNPA1-203ENST00000546500 FRAT1Q92837 279 aaPredicted RBP13.51□□□□□ -0.25
HNRNPA1-203ENST00000546500 RSPH6AQ9H0K4 717 aa13.51□□□□□ -0.25
HNRNPA1-203ENST00000546500 RIMS1Q86UR5 1692 aaKnown RBP13.51□□□□□ -0.25
HNRNPA1-203ENST00000546500 TOPAZ1Q8N9V7 1692 aa13.51□□□□□ -0.25
HNRNPA1-203ENST00000546500 ANKARQ7Z5J8 1434 aa13.5□□□□□ -0.25
HNRNPA1-203ENST00000546500 NFE2L2Q16236 605 aa13.5□□□□□ -0.25
HNRNPA1-203ENST00000546500 NUTM2FA1L443 756 aa13.5□□□□□ -0.25
HNRNPA1-203ENST00000546500 IL13P35225 146 aa13.5□□□□□ -0.25
HNRNPA1-203ENST00000546500 TRIM35Q9UPQ4 493 aa13.49□□□□□ -0.25
HNRNPA1-203ENST00000546500 MAP2P11137 1827 aaKnown RBP13.49□□□□□ -0.25
HNRNPA1-203ENST00000546500 LRRC7Q96NW7 1537 aa13.49□□□□□ -0.25
HNRNPA1-203ENST00000546500 ZRANB1Q9UGI0 708 aa13.49□□□□□ -0.25
HNRNPA1-203ENST00000546500 ANP32AP39687 249 aaKnown RBP13.48□□□□□ -0.25
HNRNPA1-203ENST00000546500 ERICH6Q7L0X2 663 aa13.48□□□□□ -0.25
HNRNPA1-203ENST00000546500 XRN1Q8IZH2 1706 aaKnown RBP13.48□□□□□ -0.25
HNRNPA1-203ENST00000546500 RRS1Q15050 365 aaKnown RBP13.47□□□□□ -0.25
HNRNPA1-203ENST00000546500 ZKSCAN2Q63HK3 967 aa13.47□□□□□ -0.25
HNRNPA1-203ENST00000546500 ZNF428Q96B54 188 aa13.47□□□□□ -0.25
HNRNPA1-203ENST00000546500 OVOS2A0A0J9YW53 1432 aa13.47□□□□□ -0.25
HNRNPA1-203ENST00000546500 OVOS2Q6IE36 1432 aa13.47□□□□□ -0.25
HNRNPA1-203ENST00000546500 HMOX1P09601 288 aa13.47□□□□□ -0.25
HNRNPA1-203ENST00000546500 KDM2BQ8NHM5 1336 aa13.47□□□□□ -0.25
HNRNPA1-203ENST00000546500 EXOSC9Q06265 439 aaKnown RBP13.47□□□□□ -0.25
HNRNPA1-203ENST00000546500 NRKQ7Z2Y5 1582 aa13.46□□□□□ -0.25
HNRNPA1-203ENST00000546500 CLUAP1Q96AJ1 413 aa13.46□□□□□ -0.25
HNRNPA1-203ENST00000546500 SMC4Q9NTJ3 1288 aa13.46□□□□□ -0.25
HNRNPA1-203ENST00000546500 FBLN1P23142 703 aa13.46□□□□□ -0.25
HNRNPA1-203ENST00000546500 FTSJ3Q8IY81 847 aaKnown RBP13.46□□□□□ -0.25
HNRNPA1-203ENST00000546500 KCNA6P17658 529 aa13.46□□□□□ -0.26
HNRNPA1-203ENST00000546500 GNAI1P63096 354 aa13.46□□□□□ -0.26
HNRNPA1-203ENST00000546500 IPO8O15397 1037 aaKnown RBP13.45□□□□□ -0.26
HNRNPA1-203ENST00000546500 PMFBP1Q8TBY8 1022 aa13.45□□□□□ -0.26
HNRNPA1-203ENST00000546500 TSR2Q969E8 191 aaKnown RBP13.45□□□□□ -0.26
HNRNPA1-203ENST00000546500 ZNF142P52746 1687 aaPredicted RBP13.45□□□□□ -0.26
HNRNPA1-203ENST00000546500 COG6Q9Y2V7 657 aa13.45□□□□□ -0.26
HNRNPA1-203ENST00000546500 USP31Q70CQ4 1352 aa13.45□□□□□ -0.26
HNRNPA1-203ENST00000546500 PANK1Q8TE04 598 aa13.45□□□□□ -0.26
HNRNPA1-203ENST00000546500 KIF16BQ96L93 1317 aa13.44□□□□□ -0.26
HNRNPA1-203ENST00000546500 ADAMTSL3P82987 1691 aa13.43□□□□□ -0.26
HNRNPA1-203ENST00000546500 IFT57Q9NWB7 429 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms