RNA–Protein interactions for RNA: ENST00000546443.5

CALCOCO1-203, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 1 (best)

Gene CALCOCO1, Length 1,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-203ENST00000546443 MAP2P11137 1827 aaKnown RBP20.13■□□□□ 0.81
CALCOCO1-203ENST00000546443 DUSP27Q5VZP5 1158 aa20.13■□□□□ 0.81
CALCOCO1-203ENST00000546443 TRMT2AQ8IZ69 625 aaKnown RBP20.13■□□□□ 0.81
CALCOCO1-203ENST00000546443 RUNDC1Q96C34 613 aa20.13■□□□□ 0.81
CALCOCO1-203ENST00000546443 NKTRP30414 1462 aaKnown RBP20.13■□□□□ 0.81
CALCOCO1-203ENST00000546443 SLFN5Q08AF3 891 aa20.12■□□□□ 0.81
CALCOCO1-203ENST00000546443 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.12■□□□□ 0.81
CALCOCO1-203ENST00000546443 ZNF692Q9BU19 519 aaPredicted RBP20.12■□□□□ 0.81
CALCOCO1-203ENST00000546443 PLEKHG3A1L390 1219 aa20.12■□□□□ 0.81
CALCOCO1-203ENST00000546443 RRP1P56182 461 aaKnown RBP20.12■□□□□ 0.81
CALCOCO1-203ENST00000546443 ANKLE2Q86XL3 938 aa20.11■□□□□ 0.81
CALCOCO1-203ENST00000546443 RGPD8O14715 1765 aaPredicted RBP20.1■□□□□ 0.81
CALCOCO1-203ENST00000546443 NCBP3Q53F19 620 aaKnown RBP20.1■□□□□ 0.81
CALCOCO1-203ENST00000546443 NME9Q86XW9 330 aa20.09■□□□□ 0.81
CALCOCO1-203ENST00000546443 FMN2Q9NZ56 1722 aa20.09■□□□□ 0.81
CALCOCO1-203ENST00000546443 AATKQ6ZMQ8 1374 aa20.08■□□□□ 0.8
CALCOCO1-203ENST00000546443 PHF23Q9BUL5 403 aaPredicted RBP20.07■□□□□ 0.8
CALCOCO1-203ENST00000546443 KCNA6P17658 529 aa20.07■□□□□ 0.8
CALCOCO1-203ENST00000546443 TCP11L2Q8N4U5 519 aa20.07■□□□□ 0.8
CALCOCO1-203ENST00000546443 POLKQ9UBT6 870 aa20.07■□□□□ 0.8
CALCOCO1-203ENST00000546443 ACEP12821 1306 aa20.06■□□□□ 0.8
CALCOCO1-203ENST00000546443 NALCNQ8IZF0 1738 aa20.06■□□□□ 0.8
CALCOCO1-203ENST00000546443 U2AF1L5P0DN76 240 aaPredicted RBP20.06■□□□□ 0.8
CALCOCO1-203ENST00000546443 U2AF1Q01081 240 aaKnown RBP eCLIP20.06■□□□□ 0.83e-6■■□□□ 12.1
CALCOCO1-203ENST00000546443 ZRANB1Q9UGI0 708 aa20.06■□□□□ 0.8
CALCOCO1-203ENST00000546443 USP6P35125 1406 aa20.06■□□□□ 0.8
CALCOCO1-203ENST00000546443 SSH2Q76I76 1423 aa20.06■□□□□ 0.8
CALCOCO1-203ENST00000546443 WWC1Q8IX03 1113 aa20.05■□□□□ 0.8
CALCOCO1-203ENST00000546443 SPINK5Q9NQ38 1064 aaPredicted RBP20.05■□□□□ 0.8
CALCOCO1-203ENST00000546443 ANKARQ7Z5J8 1434 aa20.05■□□□□ 0.8
CALCOCO1-203ENST00000546443 E9PSI1 815 aa20.04■□□□□ 0.8
CALCOCO1-203ENST00000546443 CCDC27Q2M243 656 aa20.04■□□□□ 0.8
CALCOCO1-203ENST00000546443 TTC21BQ7Z4L5 1316 aa20.04■□□□□ 0.8
CALCOCO1-203ENST00000546443 CDK12Q9NYV4 1490 aaPredicted RBP20.04■□□□□ 0.8
CALCOCO1-203ENST00000546443 DMRT2Q9Y5R5 561 aa20.04■□□□□ 0.8
CALCOCO1-203ENST00000546443 DIAPH1O60610 1272 aaKnown RBP20.03■□□□□ 0.8
CALCOCO1-203ENST00000546443 PLEKHF1Q96S99 279 aa20.03■□□□□ 0.8
CALCOCO1-203ENST00000546443 COG3Q96JB2 828 aa20.02■□□□□ 0.8
CALCOCO1-203ENST00000546443 OVOS2A0A0J9YW53 1432 aa20.02■□□□□ 0.8
CALCOCO1-203ENST00000546443 NPHP4O75161 1426 aaPredicted RBP20.02■□□□□ 0.8
CALCOCO1-203ENST00000546443 OVOS2Q6IE36 1432 aa20.02■□□□□ 0.8
CALCOCO1-203ENST00000546443 NUTM2FA1L443 756 aa20.02■□□□□ 0.79
CALCOCO1-203ENST00000546443 FBLN1P23142 703 aa20.01■□□□□ 0.79
CALCOCO1-203ENST00000546443 U2SURPO15042 1029 aaKnown RBP20■□□□□ 0.79
CALCOCO1-203ENST00000546443 B4GALNT3Q6L9W6 998 aa20■□□□□ 0.79
CALCOCO1-203ENST00000546443 WDR63Q8IWG1 891 aa19.99■□□□□ 0.79
CALCOCO1-203ENST00000546443 RRP7AQ9Y3A4 280 aaKnown RBP19.99■□□□□ 0.79
CALCOCO1-203ENST00000546443 NWD1Q149M9 1564 aa19.98■□□□□ 0.79
CALCOCO1-203ENST00000546443 LRRC7Q96NW7 1537 aa19.98■□□□□ 0.79
CALCOCO1-203ENST00000546443 EMILIN1Q9Y6C2 1016 aa19.97■□□□□ 0.79
CALCOCO1-203ENST00000546443 TTC21AQ8NDW8 1320 aa19.97■□□□□ 0.79
CALCOCO1-203ENST00000546443 USP54Q70EL1 1684 aa19.96■□□□□ 0.79
CALCOCO1-203ENST00000546443 USP31Q70CQ4 1352 aa19.96■□□□□ 0.79
CALCOCO1-203ENST00000546443 NEUROD2Q15784 382 aa19.96■□□□□ 0.79
CALCOCO1-203ENST00000546443 TSHZ2Q9NRE2 1034 aa19.96■□□□□ 0.79
CALCOCO1-203ENST00000546443 IL13P35225 146 aa19.95■□□□□ 0.78
CALCOCO1-203ENST00000546443 EXOC6Q8TAG9 804 aa19.95■□□□□ 0.78
CALCOCO1-203ENST00000546443 PNNQ9H307 717 aaKnown RBP19.95■□□□□ 0.78
CALCOCO1-203ENST00000546443 PIK3C2AO00443 1686 aa19.95■□□□□ 0.78
CALCOCO1-203ENST00000546443 FCHSD2O94868 740 aa19.94■□□□□ 0.78
CALCOCO1-203ENST00000546443 TMPOP42166 694 aaKnown RBP19.94■□□□□ 0.78
CALCOCO1-203ENST00000546443 PMFBP1Q8TBY8 1022 aa19.94■□□□□ 0.78
CALCOCO1-203ENST00000546443 PEAK1Q9H792 1746 aa19.94■□□□□ 0.78
CALCOCO1-203ENST00000546443 PLIN1O60240 522 aa19.93■□□□□ 0.78
CALCOCO1-203ENST00000546443 RSPH6AQ9H0K4 717 aa19.93■□□□□ 0.78
CALCOCO1-203ENST00000546443 MARF1Q9Y4F3 1742 aaKnown RBP19.93■□□□□ 0.78
CALCOCO1-203ENST00000546443 ADGRL3Q9HAR2 1447 aa19.93■□□□□ 0.78
CALCOCO1-203ENST00000546443 PPM1GO15355 546 aaPredicted RBP19.92■□□□□ 0.78
CALCOCO1-203ENST00000546443 MAPK8IP3Q9UPT6 1336 aa19.91■□□□□ 0.78
CALCOCO1-203ENST00000546443 RRS1Q15050 365 aaKnown RBP19.91■□□□□ 0.78
CALCOCO1-203ENST00000546443 TRIM35Q9UPQ4 493 aa19.91■□□□□ 0.78
CALCOCO1-203ENST00000546443 NGDNQ8NEJ9 315 aaKnown RBP19.9■□□□□ 0.78
CALCOCO1-203ENST00000546443 CCDC136Q96JN2 1154 aa19.89■□□□□ 0.77
CALCOCO1-203ENST00000546443 RGPD1P0DJD0 1748 aa19.89■□□□□ 0.77
CALCOCO1-203ENST00000546443 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.87■□□□□ 0.77
CALCOCO1-203ENST00000546443 CRBNQ96SW2 442 aa19.87■□□□□ 0.77
CALCOCO1-203ENST00000546443 PRKAR2BP31323 418 aa19.86■□□□□ 0.77
CALCOCO1-203ENST00000546443 IL16Q14005 1332 aa19.86■□□□□ 0.77
CALCOCO1-203ENST00000546443 C20orf194Q5TEA3 1177 aa19.86■□□□□ 0.77
CALCOCO1-203ENST00000546443 MYH16Q9H6N6 1097 aa19.85■□□□□ 0.77
CALCOCO1-203ENST00000546443 DLG5Q8TDM6 1919 aa19.85■□□□□ 0.77
CALCOCO1-203ENST00000546443 BCAR3O75815 825 aa19.84■□□□□ 0.77
CALCOCO1-203ENST00000546443 RIPK4P57078 832 aa19.84■□□□□ 0.77
CALCOCO1-203ENST00000546443 PHF8Q9UPP1 1060 aa19.84■□□□□ 0.77
CALCOCO1-203ENST00000546443 HMOX1P09601 288 aa19.83■□□□□ 0.77
CALCOCO1-203ENST00000546443 EIF4A2Q14240 407 aaKnown RBP19.82■□□□□ 0.76
CALCOCO1-203ENST00000546443 NFE2L2Q16236 605 aa19.82■□□□□ 0.76
CALCOCO1-203ENST00000546443 RBM33Q96EV2 1170 aaKnown RBP19.82■□□□□ 0.76
CALCOCO1-203ENST00000546443 PHACTR3Q96KR7 559 aa19.81■□□□□ 0.76
CALCOCO1-203ENST00000546443 SBNO1A3KN83 1393 aa19.8■□□□□ 0.76
CALCOCO1-203ENST00000546443 MAP3K19Q56UN5 1328 aa19.8■□□□□ 0.76
CALCOCO1-203ENST00000546443 FANCIQ9NVI1 1328 aa19.8■□□□□ 0.76
CALCOCO1-203ENST00000546443 NEFMP07197 916 aa19.8■□□□□ 0.76
CALCOCO1-203ENST00000546443 RARSP54136 660 aaKnown RBP19.8■□□□□ 0.76
CALCOCO1-203ENST00000546443 STRCP1A6NGW2 1772 aa19.79■□□□□ 0.76
CALCOCO1-203ENST00000546443 CT47B1P0C2W7 299 aaPredicted RBP19.78■□□□□ 0.76
CALCOCO1-203ENST00000546443 FLT4P35916 1363 aa19.78■□□□□ 0.76
CALCOCO1-203ENST00000546443 HSP90AB2PQ58FF8 381 aa19.77■□□□□ 0.76
CALCOCO1-203ENST00000546443 NLRP6P59044 892 aa19.76■□□□□ 0.75
CALCOCO1-203ENST00000546443 AEBP2Q6ZN18 517 aaPredicted RBP19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms