RNA–Protein interactions for RNA: ENST00000546039.5

PAAF1-216, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 3

Gene PAAF1, Length 805 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-216ENST00000546039 FOXO3O43524 673 aa14.86□□□□□ -0.03
PAAF1-216ENST00000546039 ABCA3Q99758 1704 aa14.86□□□□□ -0.03
PAAF1-216ENST00000546039 CRYBG1Q9Y4K1 1723 aa14.86□□□□□ -0.03
PAAF1-216ENST00000546039 SOS2Q07890 1332 aaPredicted RBP14.85□□□□□ -0.03
PAAF1-216ENST00000546039 SBNO1A3KN83 1393 aa14.85□□□□□ -0.03
PAAF1-216ENST00000546039 COL22A1Q8NFW1 1626 aaPredicted RBP14.84□□□□□ -0.03
PAAF1-216ENST00000546039 TNS3Q68CZ2 1445 aa14.84□□□□□ -0.03
PAAF1-216ENST00000546039 SSH2Q76I76 1423 aa14.84□□□□□ -0.03
PAAF1-216ENST00000546039 PSME1Q06323 249 aa14.84□□□□□ -0.03
PAAF1-216ENST00000546039 NSD3Q9BZ95 1437 aa14.83□□□□□ -0.03
PAAF1-216ENST00000546039 MED1Q15648 1581 aaPredicted RBP14.83□□□□□ -0.04
PAAF1-216ENST00000546039 KRT28Q7Z3Y7 464 aa14.83□□□□□ -0.04
PAAF1-216ENST00000546039 FBXO41Q8TF61 875 aa14.83□□□□□ -0.04
PAAF1-216ENST00000546039 PHRF1Q9P1Y6 1649 aaKnown RBP14.83□□□□□ -0.04
PAAF1-216ENST00000546039 DDX17Q92841 729 aaKnown RBP14.82□□□□□ -0.04
PAAF1-216ENST00000546039 PANK3Q9H999 370 aa14.82□□□□□ -0.04
PAAF1-216ENST00000546039 TTC21AQ8NDW8 1320 aa14.82□□□□□ -0.04
PAAF1-216ENST00000546039 XPCQ01831 940 aaPredicted RBP14.81□□□□□ -0.04
PAAF1-216ENST00000546039 TTC21BQ7Z4L5 1316 aa14.81□□□□□ -0.04
PAAF1-216ENST00000546039 ARHGEF10O15013 1369 aa14.8□□□□□ -0.04
PAAF1-216ENST00000546039 SPATA31A3Q5VYP0 1347 aa14.79□□□□□ -0.04
PAAF1-216ENST00000546039 CARD14Q9BXL6 1004 aa14.79□□□□□ -0.04
PAAF1-216ENST00000546039 NSD2O96028 1365 aa14.78□□□□□ -0.04
PAAF1-216ENST00000546039 CGNL1Q0VF96 1302 aa14.78□□□□□ -0.04
PAAF1-216ENST00000546039 PAK3O75914 559 aaPredicted RBP14.78□□□□□ -0.04
PAAF1-216ENST00000546039 DDX10Q13206 875 aaKnown RBP14.78□□□□□ -0.04
PAAF1-216ENST00000546039 LTN1O94822 1766 aa14.78□□□□□ -0.04
PAAF1-216ENST00000546039 LRRC59Q96AG4 307 aaKnown RBP14.77□□□□□ -0.05
PAAF1-216ENST00000546039 KNSTRNQ9Y448 316 aa14.77□□□□□ -0.05
PAAF1-216ENST00000546039 MAP2P11137 1827 aaKnown RBP14.77□□□□□ -0.05
PAAF1-216ENST00000546039 SLIT3O75094 1523 aa14.76□□□□□ -0.05
PAAF1-216ENST00000546039 OVOS2A0A0J9YW53 1432 aa14.76□□□□□ -0.05
PAAF1-216ENST00000546039 OVOS2Q6IE36 1432 aa14.76□□□□□ -0.05
PAAF1-216ENST00000546039 USP31Q70CQ4 1352 aa14.76□□□□□ -0.05
PAAF1-216ENST00000546039 NPC1L1Q9UHC9 1359 aa14.76□□□□□ -0.05
PAAF1-216ENST00000546039 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.76□□□□□ -0.05
PAAF1-216ENST00000546039 PNPLA6Q8IY17 1366 aa14.75□□□□□ -0.05
PAAF1-216ENST00000546039 JCADQ9P266 1359 aa14.75□□□□□ -0.05
PAAF1-216ENST00000546039 PER1O15534 1290 aaPredicted RBP14.75□□□□□ -0.05
PAAF1-216ENST00000546039 HSPA1LP34931 641 aa14.75□□□□□ -0.05
PAAF1-216ENST00000546039 ABTB2Q8N961 1025 aa14.75□□□□□ -0.05
PAAF1-216ENST00000546039 LMOD2Q6P5Q4 547 aa14.73□□□□□ -0.05
PAAF1-216ENST00000546039 NME9Q86XW9 330 aa14.73□□□□□ -0.05
PAAF1-216ENST00000546039 NFAT5O94916 1531 aa14.72□□□□□ -0.05
PAAF1-216ENST00000546039 USP19O94966 1318 aa14.72□□□□□ -0.05
PAAF1-216ENST00000546039 FYB1O15117 783 aa14.72□□□□□ -0.05
PAAF1-216ENST00000546039 AMER1Q5JTC6 1135 aaPredicted RBP14.72□□□□□ -0.05
PAAF1-216ENST00000546039 NLRP13Q86W25 1043 aa14.72□□□□□ -0.05
PAAF1-216ENST00000546039 NLRP6P59044 892 aa14.71□□□□□ -0.05
PAAF1-216ENST00000546039 COG3Q96JB2 828 aa14.71□□□□□ -0.05
PAAF1-216ENST00000546039 GGNBP2Q9H3C7 697 aa14.7□□□□□ -0.06
PAAF1-216ENST00000546039 RGPD5Q99666 1765 aa14.7□□□□□ -0.06
PAAF1-216ENST00000546039 NUTM2GQ5VZR2 741 aa14.69□□□□□ -0.06
PAAF1-216ENST00000546039 SPATA31A6Q5VVP1 1343 aa14.68□□□□□ -0.06
PAAF1-216ENST00000546039 PLCH1Q4KWH8 1693 aa14.68□□□□□ -0.06
PAAF1-216ENST00000546039 COL14A1Q05707 1796 aaKnown RBP14.68□□□□□ -0.06
PAAF1-216ENST00000546039 ABCC6O95255 1503 aa14.68□□□□□ -0.06
PAAF1-216ENST00000546039 ZRANB1Q9UGI0 708 aa14.68□□□□□ -0.06
PAAF1-216ENST00000546039 NWD2Q9ULI1 1742 aa14.67□□□□□ -0.06
PAAF1-216ENST00000546039 KCNH5Q8NCM2 988 aa14.67□□□□□ -0.06
PAAF1-216ENST00000546039 COL18A1P39060 1754 aa14.67□□□□□ -0.06
PAAF1-216ENST00000546039 CC2D1BQ5T0F9 858 aaKnown RBP14.66□□□□□ -0.06
PAAF1-216ENST00000546039 LMO7Q8WWI1 1683 aa14.65□□□□□ -0.06
PAAF1-216ENST00000546039 AATKQ6ZMQ8 1374 aa14.65□□□□□ -0.06
PAAF1-216ENST00000546039 PARD3Q8TEW0 1356 aa14.65□□□□□ -0.06
PAAF1-216ENST00000546039 HAP1P54257 671 aaPredicted RBP14.65□□□□□ -0.06
PAAF1-216ENST00000546039 MORC1Q86VD1 984 aa14.65□□□□□ -0.06
PAAF1-216ENST00000546039 PEAK1Q9H792 1746 aa14.65□□□□□ -0.06
PAAF1-216ENST00000546039 FAM208AQ9UK61 1670 aaKnown RBP14.65□□□□□ -0.06
PAAF1-216ENST00000546039 CPDO75976 1380 aa14.64□□□□□ -0.07
PAAF1-216ENST00000546039 LRP6O75581 1613 aa14.64□□□□□ -0.07
PAAF1-216ENST00000546039 GCP02774 474 aa14.64□□□□□ -0.07
PAAF1-216ENST00000546039 CABLES1Q8TDN4 633 aa14.64□□□□□ -0.07
PAAF1-216ENST00000546039 NRAPQ86VF7 1730 aa14.63□□□□□ -0.07
PAAF1-216ENST00000546039 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.63□□□□□ -0.07
PAAF1-216ENST00000546039 SMG6Q86US8 1419 aaKnown RBP14.63□□□□□ -0.07
PAAF1-216ENST00000546039 PLEKHG5O94827 1062 aa14.62□□□□□ -0.07
PAAF1-216ENST00000546039 RTL1A6NKG5 1358 aa14.61□□□□□ -0.07
PAAF1-216ENST00000546039 KIF24Q5T7B8 1368 aa14.61□□□□□ -0.07
PAAF1-216ENST00000546039 SOX12O15370 315 aa14.61□□□□□ -0.07
PAAF1-216ENST00000546039 CNGB1Q14028 1251 aaPredicted RBP14.61□□□□□ -0.07
PAAF1-216ENST00000546039 RALBP1Q15311 655 aa14.61□□□□□ -0.07
PAAF1-216ENST00000546039 CDK12Q9NYV4 1490 aaPredicted RBP14.61□□□□□ -0.07
PAAF1-216ENST00000546039 KIAA0232Q92628 1395 aa14.6□□□□□ -0.07
PAAF1-216ENST00000546039 NUTM2BA6NNL0 878 aaPredicted RBP14.6□□□□□ -0.07
PAAF1-216ENST00000546039 NUTM2EB1AL46 878 aaPredicted RBP14.6□□□□□ -0.07
PAAF1-216ENST00000546039 NUTM2AQ8IVF1 878 aaPredicted RBP14.6□□□□□ -0.07
PAAF1-216ENST00000546039 ANP32CO43423 234 aa14.59□□□□□ -0.07
PAAF1-216ENST00000546039 TNNT2P45379 298 aaPredicted RBP14.59□□□□□ -0.07
PAAF1-216ENST00000546039 DIEXFQ68CQ4 756 aaKnown RBP14.59□□□□□ -0.07
PAAF1-216ENST00000546039 PRKRIP1Q9H875 184 aaPredicted RBP14.59□□□□□ -0.07
PAAF1-216ENST00000546039 RGPD2P0DJD1 1756 aa14.59□□□□□ -0.07
PAAF1-216ENST00000546039 ZC3H6P61129 1189 aaKnown RBP14.58□□□□□ -0.08
PAAF1-216ENST00000546039 ARHGEF25Q86VW2 580 aa14.58□□□□□ -0.08
PAAF1-216ENST00000546039 PRDM11Q9NQV5 511 aa14.58□□□□□ -0.08
PAAF1-216ENST00000546039 MAP3K19Q56UN5 1328 aa14.58□□□□□ -0.08
PAAF1-216ENST00000546039 FLT4P35916 1363 aa14.58□□□□□ -0.08
PAAF1-216ENST00000546039 BLMP54132 1417 aaPredicted RBP14.58□□□□□ -0.08
PAAF1-216ENST00000546039 RRS1Q15050 365 aaKnown RBP14.57□□□□□ -0.08
PAAF1-216ENST00000546039 MYBBP1AQ9BQG0 1328 aaKnown RBP14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms