RNA–Protein interactions for RNA: ENST00000545425.2

FOXA1-202, Transcript of forkhead box A1, humanhuman

TSL 2

Gene FOXA1, Length 1,806 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-202ENST00000545425 NPM2Q86SE8 214 aaKnown RBP30.01■■■□□ 2.4
FOXA1-202ENST00000545425 ANKRD26Q9UPS8 1709 aa30■■■□□ 2.39
FOXA1-202ENST00000545425 KCNA6P17658 529 aa29.99■■■□□ 2.39
FOXA1-202ENST00000545425 TOM1O60784 492 aa29.99■■■□□ 2.39
FOXA1-202ENST00000545425 MYO5BQ9ULV0 1848 aa29.98■■■□□ 2.39
FOXA1-202ENST00000545425 TCP11L2Q8N4U5 519 aa29.98■■■□□ 2.39
FOXA1-202ENST00000545425 MAPK8IP3Q9UPT6 1336 aa29.98■■■□□ 2.39
FOXA1-202ENST00000545425 LRRC7Q96NW7 1537 aa29.98■■■□□ 2.39
FOXA1-202ENST00000545425 MTHFSP49914 203 aa29.97■■■□□ 2.39
FOXA1-202ENST00000545425 MYH16Q9H6N6 1097 aa29.97■■■□□ 2.39
FOXA1-202ENST00000545425 BCAR3O75815 825 aa29.96■■■□□ 2.39
FOXA1-202ENST00000545425 DEKP35659 375 aaKnown RBP29.96■■■□□ 2.39
FOXA1-202ENST00000545425 TBX22Q9Y458 520 aa29.96■■■□□ 2.39
FOXA1-202ENST00000545425 NUTM2DQ5VT03 806 aaPredicted RBP29.96■■■□□ 2.39
FOXA1-202ENST00000545425 CLUAP1Q96AJ1 413 aa29.94■■■□□ 2.38
FOXA1-202ENST00000545425 CANXP27824 592 aaKnown RBP29.93■■■□□ 2.38
FOXA1-202ENST00000545425 VIRMAQ69YN4 1812 aaKnown RBP29.93■■■□□ 2.38
FOXA1-202ENST00000545425 STRCP1A6NGW2 1772 aa29.92■■■□□ 2.38
FOXA1-202ENST00000545425 NBR1Q14596 966 aa29.92■■■□□ 2.38
FOXA1-202ENST00000545425 PMFBP1Q8TBY8 1022 aa29.92■■■□□ 2.38
FOXA1-202ENST00000545425 SENP3Q9H4L4 574 aaPredicted RBP29.92■■■□□ 2.38
FOXA1-202ENST00000545425 TERF2IPQ9NYB0 399 aa29.92■■■□□ 2.38
FOXA1-202ENST00000545425 RARSP54136 660 aaKnown RBP29.91■■■□□ 2.38
FOXA1-202ENST00000545425 C8orf34Q49A92 452 aa29.91■■■□□ 2.38
FOXA1-202ENST00000545425 BCL11AQ9H165 835 aa29.89■■■□□ 2.38
FOXA1-202ENST00000545425 PNNQ9H307 717 aaKnown RBP29.89■■■□□ 2.38
FOXA1-202ENST00000545425 DLC1Q96QB1 1528 aa29.88■■■□□ 2.37
FOXA1-202ENST00000545425 YTHDC2Q9H6S0 1430 aaKnown RBP29.88■■■□□ 2.37
FOXA1-202ENST00000545425 A0A1W2PP64 1363 aa29.87■■■□□ 2.37
FOXA1-202ENST00000545425 ADAMTS13Q76LX8 1427 aa29.87■■■□□ 2.37
FOXA1-202ENST00000545425 PROSER2Q86WR7 435 aaPredicted RBP29.87■■■□□ 2.37
FOXA1-202ENST00000545425 IL16Q14005 1332 aa29.86■■■□□ 2.37
FOXA1-202ENST00000545425 PIK3R4Q99570 1358 aa29.85■■■□□ 2.37
FOXA1-202ENST00000545425 DAXXQ9UER7 740 aaPredicted RBP29.85■■■□□ 2.37
FOXA1-202ENST00000545425 COL3A1P02461 1466 aaPredicted RBP29.84■■■□□ 2.37
FOXA1-202ENST00000545425 DIP2AQ14689 1571 aa29.84■■■□□ 2.37
FOXA1-202ENST00000545425 TMEM94Q12767 1356 aa29.83■■■□□ 2.37
FOXA1-202ENST00000545425 TNNT2P45379 298 aaPredicted RBP29.82■■■□□ 2.36
FOXA1-202ENST00000545425 PIP4K2BP78356 416 aa29.82■■■□□ 2.36
FOXA1-202ENST00000545425 ALKQ9UM73 1620 aa29.82■■■□□ 2.36
FOXA1-202ENST00000545425 CABP2Q9NPB3 220 aa29.82■■■□□ 2.36
FOXA1-202ENST00000545425 NWD1Q149M9 1564 aa29.82■■■□□ 2.36
FOXA1-202ENST00000545425 U2AF1L5P0DN76 240 aaPredicted RBP29.81■■■□□ 2.36
FOXA1-202ENST00000545425 U2AF1Q01081 240 aaKnown RBP eCLIP29.81■■■□□ 2.36
FOXA1-202ENST00000545425 SRPK2P78362 688 aaKnown RBP29.8■■■□□ 2.36
FOXA1-202ENST00000545425 CDC42BPGQ6DT37 1551 aa29.79■■■□□ 2.36
FOXA1-202ENST00000545425 HDGFL2Q7Z4V5 671 aaPredicted RBP29.79■■■□□ 2.36
FOXA1-202ENST00000545425 COG6Q9Y2V7 657 aa29.77■■■□□ 2.36
FOXA1-202ENST00000545425 KIF20BQ96Q89 1820 aa29.77■■■□□ 2.36
FOXA1-202ENST00000545425 PNPLA6Q8IY17 1366 aa29.77■■■□□ 2.36
FOXA1-202ENST00000545425 CD163L1Q9NR16 1453 aa29.77■■■□□ 2.36
FOXA1-202ENST00000545425 POGKQ9P215 609 aa29.76■■■□□ 2.35
FOXA1-202ENST00000545425 ATP7BP35670 1465 aa29.76■■■□□ 2.35
FOXA1-202ENST00000545425 IGHDP01880 384 aa29.75■■■□□ 2.35
FOXA1-202ENST00000545425 RGS3P49796 1198 aa29.75■■■□□ 2.35
FOXA1-202ENST00000545425 NEUROD2Q15784 382 aa29.75■■■□□ 2.35
FOXA1-202ENST00000545425 SKAP1Q86WV1 359 aa29.75■■■□□ 2.35
FOXA1-202ENST00000545425 PANK1Q8TE04 598 aa29.75■■■□□ 2.35
FOXA1-202ENST00000545425 RRP7AQ9Y3A4 280 aaKnown RBP29.75■■■□□ 2.35
FOXA1-202ENST00000545425 PLEKHF1Q96S99 279 aa29.74■■■□□ 2.35
FOXA1-202ENST00000545425 RWDD1Q9H446 243 aaPredicted RBP29.74■■■□□ 2.35
FOXA1-202ENST00000545425 CHD2O14647 1828 aaKnown RBP29.73■■■□□ 2.35
FOXA1-202ENST00000545425 NEFMP07197 916 aa29.73■■■□□ 2.35
FOXA1-202ENST00000545425 RBM33Q96EV2 1170 aaKnown RBP29.73■■■□□ 2.35
FOXA1-202ENST00000545425 AMOTL2Q9Y2J4 779 aa29.73■■■□□ 2.35
FOXA1-202ENST00000545425 ZKSCAN2Q63HK3 967 aa29.72■■■□□ 2.35
FOXA1-202ENST00000545425 FRAT1Q92837 279 aaPredicted RBP29.72■■■□□ 2.35
FOXA1-202ENST00000545425 NCOA3Q9Y6Q9 1424 aa29.72■■■□□ 2.35
FOXA1-202ENST00000545425 PRAM1Q96QH2 718 aa29.71■■■□□ 2.35
FOXA1-202ENST00000545425 FYB1O15117 783 aa29.7■■■□□ 2.34
FOXA1-202ENST00000545425 MSH6P52701 1360 aa29.7■■■□□ 2.34
FOXA1-202ENST00000545425 TMPOP42166 694 aaKnown RBP29.69■■■□□ 2.34
FOXA1-202ENST00000545425 MVPQ14764 893 aaKnown RBP29.68■■■□□ 2.34
FOXA1-202ENST00000545425 NRXN3Q9Y4C0 1643 aa29.68■■■□□ 2.34
FOXA1-202ENST00000545425 STK26Q9P289 416 aa29.68■■■□□ 2.34
FOXA1-202ENST00000545425 XIRP1Q702N8 1843 aaKnown RBP29.68■■■□□ 2.34
FOXA1-202ENST00000545425 ZNF428Q96B54 188 aa29.67■■■□□ 2.34
FOXA1-202ENST00000545425 HSPA1LP34931 641 aa29.66■■■□□ 2.34
FOXA1-202ENST00000545425 METP08581 1390 aa29.66■■■□□ 2.34
FOXA1-202ENST00000545425 PTPRUQ92729 1446 aa29.66■■■□□ 2.34
FOXA1-202ENST00000545425 DIAPH1O60610 1272 aaKnown RBP29.66■■■□□ 2.34
FOXA1-202ENST00000545425 LAS1LQ9Y4W2 734 aaKnown RBP29.65■■■□□ 2.34
FOXA1-202ENST00000545425 C14orf37Q86TY3 774 aa29.64■■■□□ 2.34
FOXA1-202ENST00000545425 DZIP1LQ8IYY4 767 aaKnown RBP29.64■■■□□ 2.34
FOXA1-202ENST00000545425 MINK1Q8N4C8 1332 aaPredicted RBP29.64■■■□□ 2.34
FOXA1-202ENST00000545425 SETD1AO15047 1707 aaKnown RBP29.64■■■□□ 2.34
FOXA1-202ENST00000545425 FCHSD2O94868 740 aa29.64■■■□□ 2.33
FOXA1-202ENST00000545425 GGNBP2Q9H3C7 697 aa29.64■■■□□ 2.33
FOXA1-202ENST00000545425 CDK19Q9BWU1 502 aa29.63■■■□□ 2.33
FOXA1-202ENST00000545425 SAFB2Q14151 953 aaKnown RBP eCLIP29.61■■■□□ 2.33
FOXA1-202ENST00000545425 U2SURPO15042 1029 aaKnown RBP29.61■■■□□ 2.33
FOXA1-202ENST00000545425 FTSJ3Q8IY81 847 aaKnown RBP29.61■■■□□ 2.33
FOXA1-202ENST00000545425 C19orf44Q9H6X5 657 aa29.61■■■□□ 2.33
FOXA1-202ENST00000545425 TRIM35Q9UPQ4 493 aa29.61■■■□□ 2.33
FOXA1-202ENST00000545425 DDX19BQ9UMR2 479 aa29.6■■■□□ 2.33
FOXA1-202ENST00000545425 FAM135BQ49AJ0 1406 aa29.6■■■□□ 2.33
FOXA1-202ENST00000545425 PPIP5K1Q6PFW1 1433 aa29.6■■■□□ 2.33
FOXA1-202ENST00000545425 RLBP1P12271 317 aa29.59■■■□□ 2.33
FOXA1-202ENST00000545425 BECN1Q14457 450 aa29.59■■■□□ 2.33
FOXA1-202ENST00000545425 SIRT1Q96EB6 747 aa29.59■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms